RNA–Protein interactions for RNA: ENST00000423982.6

MSH5-206, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-206ENST00000423982 SPAG5Q96R06 1193 aa15.6■□□□□ 0.09
MSH5-206ENST00000423982 KCTD10Q9H3F6 313 aa15.6■□□□□ 0.09
MSH5-206ENST00000423982 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.6■□□□□ 0.09
MSH5-206ENST00000423982 MARCH6O60337 910 aa15.59■□□□□ 0.09
MSH5-206ENST00000423982 GH2P01242 217 aa15.59■□□□□ 0.09
MSH5-206ENST00000423982 STAT3P40763 770 aa15.59■□□□□ 0.09
MSH5-206ENST00000423982 ADCY7P51828 1080 aa15.59■□□□□ 0.09
MSH5-206ENST00000423982 CUL1Q13616 776 aa15.59■□□□□ 0.09
MSH5-206ENST00000423982 SEPT2Q15019 361 aa15.59■□□□□ 0.09
MSH5-206ENST00000423982 DPY19L2P1Q6NXN4 242 aa15.59■□□□□ 0.09
MSH5-206ENST00000423982 ALKBH5Q6P6C2 394 aaKnown RBP15.59■□□□□ 0.09
MSH5-206ENST00000423982 TMC3Q7Z5M5 1100 aa15.59■□□□□ 0.09
MSH5-206ENST00000423982 NEDD1Q8NHV4 660 aa15.59■□□□□ 0.09
MSH5-206ENST00000423982 TPCN2Q8NHX9 752 aa15.59■□□□□ 0.09
MSH5-206ENST00000423982 ZBED3Q96IU2 234 aaPredicted RBP15.59■□□□□ 0.09
MSH5-206ENST00000423982 DEFB129Q9H1M3 183 aa15.59■□□□□ 0.09
MSH5-206ENST00000423982 TPX2Q9ULW0 747 aaKnown RBP15.59■□□□□ 0.09
MSH5-206ENST00000423982 ATP8A1Q9Y2Q0 1164 aa15.59■□□□□ 0.09
MSH5-206ENST00000423982 SHBGP04278 402 aa15.59■□□□□ 0.09
MSH5-206ENST00000423982 UCHL3P15374 230 aa15.59■□□□□ 0.09
MSH5-206ENST00000423982 NR2F2P24468 414 aa15.59■□□□□ 0.09
MSH5-206ENST00000423982 SCTRP47872 440 aa15.59■□□□□ 0.09
MSH5-206ENST00000423982 CDR1P51861 262 aa15.59■□□□□ 0.09
MSH5-206ENST00000423982 GPBP1Q86WP2 473 aa15.59■□□□□ 0.09
MSH5-206ENST00000423982 PARP9Q8IXQ6 854 aa15.59■□□□□ 0.09
MSH5-206ENST00000423982 KIRREL3Q8IZU9 778 aa15.59■□□□□ 0.09
MSH5-206ENST00000423982 ACTRT1Q8TDG2 376 aa15.59■□□□□ 0.09
MSH5-206ENST00000423982 LRRC45Q96CN5 670 aa15.59■□□□□ 0.09
MSH5-206ENST00000423982 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.59■□□□□ 0.091e-7■■□□□ 13.4
MSH5-206ENST00000423982 IKZF4Q9H2S9 585 aa15.59■□□□□ 0.09
MSH5-206ENST00000423982 EMILIN3Q9NT22 766 aa15.59■□□□□ 0.09
MSH5-206ENST00000423982 PNMA2Q9UL42 364 aa15.59■□□□□ 0.09
MSH5-206ENST00000423982 SMIM23A6NLE4 172 aa15.59■□□□□ 0.09
MSH5-206ENST00000423982 PPP1R11O60927 126 aaPredicted RBP15.59■□□□□ 0.09
MSH5-206ENST00000423982 PDIA5Q14554 519 aa15.59■□□□□ 0.09
MSH5-206ENST00000423982 DCAF17Q5H9S7 520 aaPredicted RBP15.59■□□□□ 0.09
MSH5-206ENST00000423982 PEX26Q7Z412 305 aa15.59■□□□□ 0.09
MSH5-206ENST00000423982 MTMR14Q8NCE2 650 aa15.59■□□□□ 0.09
MSH5-206ENST00000423982 OSGEPQ9NPF4 335 aa15.59■□□□□ 0.09
MSH5-206ENST00000423982 SWAP70Q9UH65 585 aa15.59■□□□□ 0.09
MSH5-206ENST00000423982 DDX25Q9UHL0 483 aaKnown RBP15.59■□□□□ 0.09
MSH5-206ENST00000423982 MCM8Q9UJA3 840 aa15.59■□□□□ 0.09
MSH5-206ENST00000423982 CAND2O75155 1236 aa15.58■□□□□ 0.08
MSH5-206ENST00000423982 SCP2P22307 547 aa15.58■□□□□ 0.08
MSH5-206ENST00000423982 PREPLQ4J6C6 727 aaPredicted RBP15.58■□□□□ 0.08
MSH5-206ENST00000423982 CPLX4Q7Z7G2 160 aa15.58■□□□□ 0.08
MSH5-206ENST00000423982 CACNA2D3Q8IZS8 1091 aa15.58■□□□□ 0.08
MSH5-206ENST00000423982 RAB34Q9BZG1 259 aa15.58■□□□□ 0.08
MSH5-206ENST00000423982 A1CFQ9NQ94 594 aaKnown RBP15.58■□□□□ 0.08
MSH5-206ENST00000423982 F8VZ95 297 aa15.58■□□□□ 0.08
MSH5-206ENST00000423982 PLA2G4BP0C869 781 aa15.58■□□□□ 0.08
MSH5-206ENST00000423982 ZYXQ15942 572 aaKnown RBP15.58■□□□□ 0.08
MSH5-206ENST00000423982 NBPF12Q5TAG4 269 aaPredicted RBP15.58■□□□□ 0.08
MSH5-206ENST00000423982 DAAM2Q86T65 1068 aa15.58■□□□□ 0.08
MSH5-206ENST00000423982 TATDN2Q93075 761 aa15.58■□□□□ 0.08
MSH5-206ENST00000423982 PBKQ96KB5 322 aa15.58■□□□□ 0.08
MSH5-206ENST00000423982 MTMR4Q9NYA4 1195 aa15.58■□□□□ 0.08
MSH5-206ENST00000423982 PON1P27169 355 aa15.57■□□□□ 0.08
MSH5-206ENST00000423982 SLC16A2P36021 539 aa15.57■□□□□ 0.08
MSH5-206ENST00000423982 PRPF4BQ13523 1007 aaKnown RBP15.57■□□□□ 0.08
MSH5-206ENST00000423982 SNCBQ16143 134 aa15.57■□□□□ 0.08
MSH5-206ENST00000423982 ABCB5Q2M3G0 1257 aa15.57■□□□□ 0.08
MSH5-206ENST00000423982 TTBK2Q6IQ55 1244 aa15.57■□□□□ 0.08
MSH5-206ENST00000423982 RUFY4Q6ZNE9 571 aa15.57■□□□□ 0.08
MSH5-206ENST00000423982 GIMAP7Q8NHV1 300 aa15.57■□□□□ 0.08
MSH5-206ENST00000423982 UHMK1Q8TAS1 419 aaKnown RBP15.57■□□□□ 0.08
MSH5-206ENST00000423982 N4BP2L2Q92802 583 aaPredicted RBP15.57■□□□□ 0.08
MSH5-206ENST00000423982 FAM212AQ96EL1 285 aa15.57■□□□□ 0.08
MSH5-206ENST00000423982 CEP63Q96MT8 703 aa15.57■□□□□ 0.08
MSH5-206ENST00000423982 GGA2Q9UJY4 613 aa15.57■□□□□ 0.08
MSH5-206ENST00000423982 PCDHA12Q9UN75 941 aa15.57■□□□□ 0.08
MSH5-206ENST00000423982 FRMD3A2A2Y4 597 aa15.57■□□□□ 0.08
MSH5-206ENST00000423982 POTEFA5A3E0 1075 aa15.57■□□□□ 0.08
MSH5-206ENST00000423982 BHMG1C9JSJ3 638 aaPredicted RBP15.57■□□□□ 0.08
MSH5-206ENST00000423982 CLSTN1O94985 981 aa15.57■□□□□ 0.08
MSH5-206ENST00000423982 POTEIP0CG38 1075 aa15.57■□□□□ 0.08
MSH5-206ENST00000423982 DRD4P21917 467 aa15.57■□□□□ 0.08
MSH5-206ENST00000423982 BIRC3Q13489 604 aa15.57■□□□□ 0.08
MSH5-206ENST00000423982 PLCB4Q15147 1175 aa15.57■□□□□ 0.08
MSH5-206ENST00000423982 EAPPQ56P03 285 aaPredicted RBP15.57■□□□□ 0.08
MSH5-206ENST00000423982 ARSHQ5FYA8 562 aa15.57■□□□□ 0.08
MSH5-206ENST00000423982 TCERG1LQ5VWI1 586 aa15.57■□□□□ 0.08
MSH5-206ENST00000423982 POTEGQ6S5H5 508 aa15.57■□□□□ 0.08
MSH5-206ENST00000423982 POTEEQ6S8J3 1075 aa15.57■□□□□ 0.08
MSH5-206ENST00000423982 EP400NLQ6ZTU2 488 aa15.57■□□□□ 0.08
MSH5-206ENST00000423982 RIOX1Q9H6W3 641 aa15.57■□□□□ 0.08
MSH5-206ENST00000423982 SUFUQ9UMX1 484 aa15.57■□□□□ 0.08
MSH5-206ENST00000423982 SIPA1L1O43166 1804 aa15.57■□□□□ 0.08
MSH5-206ENST00000423982 MEIS1O00470 390 aa15.56■□□□□ 0.08
MSH5-206ENST00000423982 FGGP02679 453 aa15.56■□□□□ 0.08
MSH5-206ENST00000423982 KRT18P05783 430 aaKnown RBP15.56■□□□□ 0.08
MSH5-206ENST00000423982 CYP11B2P19099 503 aa15.56■□□□□ 0.08
MSH5-206ENST00000423982 CASP4P49662 377 aa15.56■□□□□ 0.08
MSH5-206ENST00000423982 IFFO1Q0D2I5 559 aa15.56■□□□□ 0.08
MSH5-206ENST00000423982 DPY19L2Q6NUT2 758 aa15.56■□□□□ 0.08
MSH5-206ENST00000423982 SAMD1Q6SPF0 538 aaPredicted RBP15.56■□□□□ 0.08
MSH5-206ENST00000423982 ZNF526Q8TF50 670 aaPredicted RBP15.56■□□□□ 0.08
MSH5-206ENST00000423982 ATP8B4Q8TF62 1192 aa15.56■□□□□ 0.08
MSH5-206ENST00000423982 U2AF1L4Q8WU68 220 aaKnown RBP15.56■□□□□ 0.08
MSH5-206ENST00000423982 GLG1Q92896 1179 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms