RNA–Protein interactions for RNA: ENST00000423960.1

FOXN4-203, Transcript of forkhead box N4, humanhuman

TSL 1 (best)

Gene FOXN4, Length 1,219 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4-203ENST00000423960 ZNF710Q8N1W2 664 aa18.89■□□□□ 0.61
FOXN4-203ENST00000423960 TMEM199Q8N511 208 aa18.89■□□□□ 0.61
FOXN4-203ENST00000423960 IQUBQ8NA54 791 aa18.89■□□□□ 0.61
FOXN4-203ENST00000423960 MCPH1Q8NEM0 835 aa18.89■□□□□ 0.61
FOXN4-203ENST00000423960 LARP4BQ92615 738 aaKnown RBP18.89■□□□□ 0.61
FOXN4-203ENST00000423960 XPNPEP1Q9NQW7 623 aa18.89■□□□□ 0.61
FOXN4-203ENST00000423960 KCNH3Q9ULD8 1083 aa18.89■□□□□ 0.61
FOXN4-203ENST00000423960 TRIP12Q14669 1992 aaPredicted RBP18.89■□□□□ 0.61
FOXN4-203ENST00000423960 A0A1B0GVL5 298 aa18.88■□□□□ 0.61
FOXN4-203ENST00000423960 M0QZ92 97 aa18.88■□□□□ 0.61
FOXN4-203ENST00000423960 POLR2DO15514 142 aaKnown RBP18.88■□□□□ 0.61
FOXN4-203ENST00000423960 CHRNA1P02708 482 aa18.88■□□□□ 0.61
FOXN4-203ENST00000423960 CTSHP09668 335 aa18.88■□□□□ 0.61
FOXN4-203ENST00000423960 DHX8Q14562 1220 aaKnown RBP18.88■□□□□ 0.61
FOXN4-203ENST00000423960 NAALADL2Q58DX5 795 aa18.88■□□□□ 0.61
FOXN4-203ENST00000423960 FAM102BQ5T8I3 360 aa18.88■□□□□ 0.61
FOXN4-203ENST00000423960 TRAF7Q6Q0C0 670 aa18.88■□□□□ 0.61
FOXN4-203ENST00000423960 CLEC17AQ6ZS10 378 aa18.88■□□□□ 0.61
FOXN4-203ENST00000423960 C1orf186Q6ZWK4 172 aa18.88■□□□□ 0.61
FOXN4-203ENST00000423960 SV2BQ7L1I2 683 aa18.88■□□□□ 0.61
FOXN4-203ENST00000423960 PRPF31Q8WWY3 499 aaKnown RBP18.88■□□□□ 0.61
FOXN4-203ENST00000423960 PSPC1Q8WXF1 523 aaKnown RBP18.88■□□□□ 0.61
FOXN4-203ENST00000423960 DHX58Q96C10 678 aa18.88■□□□□ 0.61
FOXN4-203ENST00000423960 SCLYQ96I15 445 aa18.88■□□□□ 0.61
FOXN4-203ENST00000423960 PYM1Q9BRP8 204 aaKnown RBP18.88■□□□□ 0.61
FOXN4-203ENST00000423960 CELF4Q9BZC1 486 aaKnown RBP18.88■□□□□ 0.61
FOXN4-203ENST00000423960 WNT8AQ9H1J5 351 aa18.88■□□□□ 0.61
FOXN4-203ENST00000423960 TRPV2Q9Y5S1 764 aa18.88■□□□□ 0.61
FOXN4-203ENST00000423960 CDY2AQ9Y6F7 541 aa18.88■□□□□ 0.61
FOXN4-203ENST00000423960 ASAP2O43150 1006 aa18.87■□□□□ 0.61
FOXN4-203ENST00000423960 GPR32O75388 356 aa18.87■□□□□ 0.61
FOXN4-203ENST00000423960 PARNO95453 639 aaKnown RBP18.87■□□□□ 0.61
FOXN4-203ENST00000423960 PFKFB1P16118 471 aa18.87■□□□□ 0.61
FOXN4-203ENST00000423960 ARL2P36404 184 aa18.87■□□□□ 0.61
FOXN4-203ENST00000423960 NLRP11P59045 1033 aaKnown RBP18.87■□□□□ 0.61
FOXN4-203ENST00000423960 FPGSQ05932 587 aa18.87■□□□□ 0.61
FOXN4-203ENST00000423960 MGAT3Q09327 533 aa18.87■□□□□ 0.61
FOXN4-203ENST00000423960 LTBP2Q14767 1821 aa18.87■□□□□ 0.61
FOXN4-203ENST00000423960 Q7L0L9 218 aa18.87■□□□□ 0.61
FOXN4-203ENST00000423960 RHPN2Q8IUC4 686 aa18.87■□□□□ 0.61
FOXN4-203ENST00000423960 FSIP1Q8NA03 581 aa18.87■□□□□ 0.61
FOXN4-203ENST00000423960 MRPS27Q92552 414 aaKnown RBP18.87■□□□□ 0.61
FOXN4-203ENST00000423960 RUSC1Q9BVN2 902 aa18.87■□□□□ 0.61
FOXN4-203ENST00000423960 KCND2Q9NZV8 630 aa18.87■□□□□ 0.61
FOXN4-203ENST00000423960 HPSEQ9Y251 543 aa18.87■□□□□ 0.61
FOXN4-203ENST00000423960 TCHHQ07283 1943 aa18.86■□□□□ 0.61
FOXN4-203ENST00000423960 FAM237AA0A1B0GTK4 181 aa18.86■□□□□ 0.61
FOXN4-203ENST00000423960 GUCY2CP25092 1073 aa18.86■□□□□ 0.61
FOXN4-203ENST00000423960 RFC2P35250 354 aa18.86■□□□□ 0.61
FOXN4-203ENST00000423960 LAMTOR4Q0VGL1 99 aa18.86■□□□□ 0.61
FOXN4-203ENST00000423960 MXD4Q14582 209 aaPredicted RBP18.86■□□□□ 0.61
FOXN4-203ENST00000423960 E2F4Q16254 413 aa18.86■□□□□ 0.61
FOXN4-203ENST00000423960 KIZQ2M2Z5 673 aa18.86■□□□□ 0.61
FOXN4-203ENST00000423960 ARSHQ5FYA8 562 aa18.86■□□□□ 0.61
FOXN4-203ENST00000423960 GPBP1Q86WP2 473 aa18.86■□□□□ 0.61
FOXN4-203ENST00000423960 TMEM87AQ8NBN3 555 aa18.86■□□□□ 0.61
FOXN4-203ENST00000423960 PPP1R16BQ96T49 567 aa18.86■□□□□ 0.61
FOXN4-203ENST00000423960 TIPINQ9BVW5 301 aa18.86■□□□□ 0.61
FOXN4-203ENST00000423960 POLR3FQ9H1D9 316 aaPredicted RBP18.86■□□□□ 0.61
FOXN4-203ENST00000423960 ADAMTS10Q9H324 1103 aa18.86■□□□□ 0.61
FOXN4-203ENST00000423960 CUEDC2Q9H467 287 aa18.86■□□□□ 0.61
FOXN4-203ENST00000423960 CDHR5Q9HBB8 845 aa18.86■□□□□ 0.61
FOXN4-203ENST00000423960 GPRC5CQ9NQ84 441 aa18.86■□□□□ 0.61
FOXN4-203ENST00000423960 GINS2Q9Y248 185 aa18.86■□□□□ 0.61
FOXN4-203ENST00000423960 COL4A3BPQ9Y5P4 624 aa18.86■□□□□ 0.61
FOXN4-203ENST00000423960 CSF2RAP15509 400 aa18.85■□□□□ 0.61
FOXN4-203ENST00000423960 SYKP43405 635 aa18.85■□□□□ 0.61
FOXN4-203ENST00000423960 GPC3P51654 580 aa18.85■□□□□ 0.61
FOXN4-203ENST00000423960 NDUFA8P51970 172 aa18.85■□□□□ 0.61
FOXN4-203ENST00000423960 CRYBB1P53674 252 aaPredicted RBP18.85■□□□□ 0.61
FOXN4-203ENST00000423960 PPIGQ13427 754 aaKnown RBP eCLIP18.85■□□□□ 0.61
FOXN4-203ENST00000423960 KSR1Q8IVT5 923 aa18.85■□□□□ 0.61
FOXN4-203ENST00000423960 RPUSD2Q8IZ73 545 aaKnown RBP18.85■□□□□ 0.61
FOXN4-203ENST00000423960 DEFB123Q8N688 67 aa18.85■□□□□ 0.61
FOXN4-203ENST00000423960 NLRP7Q8WX94 980 aa18.85■□□□□ 0.61
FOXN4-203ENST00000423960 KIFAP3Q92845 792 aa18.85■□□□□ 0.61
FOXN4-203ENST00000423960 POLD4Q9HCU8 107 aa18.85■□□□□ 0.61
FOXN4-203ENST00000423960 HIP1RO75146 1068 aa18.84■□□□□ 0.61
FOXN4-203ENST00000423960 SRGAP2CP0DJJ0 459 aa18.84■□□□□ 0.61
FOXN4-203ENST00000423960 RAD51AP2Q09MP3 1159 aa18.84■□□□□ 0.61
FOXN4-203ENST00000423960 MBTPS1Q14703 1052 aa18.84■□□□□ 0.61
FOXN4-203ENST00000423960 GPNMBQ14956 572 aa18.84■□□□□ 0.61
FOXN4-203ENST00000423960 ZNF410Q86VK4 478 aa18.84■□□□□ 0.61
FOXN4-203ENST00000423960 ASAP3Q8TDY4 903 aa18.84■□□□□ 0.61
FOXN4-203ENST00000423960 ZNF668Q96K58 619 aaPredicted RBP18.84■□□□□ 0.61
FOXN4-203ENST00000423960 NLRP4Q96MN2 994 aa18.84■□□□□ 0.61
FOXN4-203ENST00000423960 SCLT1Q96NL6 688 aa18.84■□□□□ 0.61
FOXN4-203ENST00000423960 GBP4Q96PP9 640 aa18.84■□□□□ 0.61
FOXN4-203ENST00000423960 GOLPH3LQ9H4A5 285 aa18.84■□□□□ 0.61
FOXN4-203ENST00000423960 USP25Q9UHP3 1055 aa18.84■□□□□ 0.61
FOXN4-203ENST00000423960 SQORQ9Y6N5 450 aa18.84■□□□□ 0.61
FOXN4-203ENST00000423960 A0A087WZ62 844 aa18.83■□□□□ 0.6
FOXN4-203ENST00000423960 NPHP3-ACAD11A0A0J9YXS1 232 aa18.83■□□□□ 0.6
FOXN4-203ENST00000423960 NBNO60934 754 aa18.83■□□□□ 0.6
FOXN4-203ENST00000423960 GADD45BO75293 160 aaPredicted RBP18.83■□□□□ 0.6
FOXN4-203ENST00000423960 PRPF40AO75400 957 aaKnown RBP18.83■□□□□ 0.6
FOXN4-203ENST00000423960 KRT18P05783 430 aaKnown RBP18.83■□□□□ 0.6
FOXN4-203ENST00000423960 GLRA2P23416 452 aa18.83■□□□□ 0.6
FOXN4-203ENST00000423960 AMPD3Q01432 767 aa18.83■□□□□ 0.6
FOXN4-203ENST00000423960 TFDP1Q14186 410 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms