RNA–Protein interactions for RNA: ENST00000423653.5

CCDC78-203, Transcript of coiled-coil domain containing 78, humanhuman

APPRIS ALT2 TSL 3

Gene CCDC78, Length 621 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-203ENST00000423653 ITGB1P05556 798 aa18.85■□□□□ 0.61
CCDC78-203ENST00000423653 DARSP14868 501 aaKnown RBP18.85■□□□□ 0.61
CCDC78-203ENST00000423653 KRT2P35908 639 aa18.85■□□□□ 0.61
CCDC78-203ENST00000423653 DSC3Q14574 896 aa18.85■□□□□ 0.61
CCDC78-203ENST00000423653 ABI1Q8IZP0 508 aa18.85■□□□□ 0.61
CCDC78-203ENST00000423653 KLHL23Q8NBE8 558 aa18.85■□□□□ 0.61
CCDC78-203ENST00000423653 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.85■□□□□ 0.61
CCDC78-203ENST00000423653 GTF3C6Q969F1 213 aa18.85■□□□□ 0.61
CCDC78-203ENST00000423653 GRXCR2A6NFK2 248 aa18.84■□□□□ 0.61
CCDC78-203ENST00000423653 LAG3P18627 525 aa18.84■□□□□ 0.61
CCDC78-203ENST00000423653 QARSP47897 775 aaKnown RBP18.84■□□□□ 0.61
CCDC78-203ENST00000423653 UBE3AQ05086 875 aa18.84■□□□□ 0.61
CCDC78-203ENST00000423653 HYAL1Q12794 435 aa18.84■□□□□ 0.61
CCDC78-203ENST00000423653 LRRC43Q8N309 656 aa18.84■□□□□ 0.61
CCDC78-203ENST00000423653 GCOM2Q9BZD3 368 aaPredicted RBP18.84■□□□□ 0.61
CCDC78-203ENST00000423653 TMEM117Q9H0C3 514 aa18.84■□□□□ 0.61
CCDC78-203ENST00000423653 DACT1Q9NYF0 836 aa18.84■□□□□ 0.61
CCDC78-203ENST00000423653 VAV3Q9UKW4 847 aa18.84■□□□□ 0.61
CCDC78-203ENST00000423653 PPME1Q9Y570 386 aa18.84■□□□□ 0.61
CCDC78-203ENST00000423653 IGKV6-21A0A0C4DH24 114 aa18.83■□□□□ 0.6
CCDC78-203ENST00000423653 FSD2A1L4K1 749 aa18.83■□□□□ 0.6
CCDC78-203ENST00000423653 DDX11L8A8MPP1 907 aa18.83■□□□□ 0.6
CCDC78-203ENST00000423653 CTDNEP1O95476 244 aa18.83■□□□□ 0.6
CCDC78-203ENST00000423653 CENPBP07199 599 aaPredicted RBP18.83■□□□□ 0.6
CCDC78-203ENST00000423653 SFPQP23246 707 aaKnown RBP eCLIP18.83■□□□□ 0.6
CCDC78-203ENST00000423653 FAM189BP81408 668 aa18.83■□□□□ 0.6
CCDC78-203ENST00000423653 TRIM29Q14134 588 aa18.83■□□□□ 0.6
CCDC78-203ENST00000423653 CTC1Q2NKJ3 1217 aa18.83■□□□□ 0.6
CCDC78-203ENST00000423653 FAM102BQ5T8I3 360 aa18.83■□□□□ 0.6
CCDC78-203ENST00000423653 ZNF410Q86VK4 478 aa18.83■□□□□ 0.6
CCDC78-203ENST00000423653 FAM178BQ8IXR5 827 aa18.83■□□□□ 0.6
CCDC78-203ENST00000423653 EXOC8Q8IYI6 725 aa18.83■□□□□ 0.6
CCDC78-203ENST00000423653 SLFN12Q8IYM2 578 aa18.83■□□□□ 0.6
CCDC78-203ENST00000423653 THNSL1Q8IYQ7 743 aa18.83■□□□□ 0.6
CCDC78-203ENST00000423653 SPPL3Q8TCT6 385 aa18.83■□□□□ 0.6
CCDC78-203ENST00000423653 OXER1Q8TDS5 423 aa18.83■□□□□ 0.6
CCDC78-203ENST00000423653 SLC7A3Q8WY07 619 aa18.83■□□□□ 0.6
CCDC78-203ENST00000423653 PLXNA4Q9HCM2 1894 aa18.82■□□□□ 0.6
CCDC78-203ENST00000423653 TMEM150BA6NC51 233 aa18.82■□□□□ 0.6
CCDC78-203ENST00000423653 MAFO75444 373 aaPredicted RBP18.82■□□□□ 0.6
CCDC78-203ENST00000423653 BAG4O95429 457 aaKnown RBP18.82■□□□□ 0.6
CCDC78-203ENST00000423653 P4HBP07237 508 aaKnown RBP18.82■□□□□ 0.6
CCDC78-203ENST00000423653 FGFR1P11362 822 aa18.82■□□□□ 0.6
CCDC78-203ENST00000423653 IL9P15248 144 aa18.82■□□□□ 0.6
CCDC78-203ENST00000423653 NEK4P51957 841 aa18.82■□□□□ 0.6
CCDC78-203ENST00000423653 ME3Q16798 604 aa18.82■□□□□ 0.6
CCDC78-203ENST00000423653 NECAB1Q8N987 351 aa18.82■□□□□ 0.6
CCDC78-203ENST00000423653 COLGALT1Q8NBJ5 622 aa18.82■□□□□ 0.6
CCDC78-203ENST00000423653 POF1BQ8WVV4 589 aa18.82■□□□□ 0.6
CCDC78-203ENST00000423653 ZNF668Q96K58 619 aaPredicted RBP18.82■□□□□ 0.6
CCDC78-203ENST00000423653 CEP89Q96ST8 783 aa18.82■□□□□ 0.6
CCDC78-203ENST00000423653 INO80BQ9C086 356 aaPredicted RBP18.82■□□□□ 0.6
CCDC78-203ENST00000423653 CYP26B1Q9NR63 512 aa18.82■□□□□ 0.6
CCDC78-203ENST00000423653 GJB4Q9NTQ9 266 aa18.82■□□□□ 0.6
CCDC78-203ENST00000423653 EML1O00423 815 aa18.81■□□□□ 0.6
CCDC78-203ENST00000423653 STBD1O95210 358 aa18.81■□□□□ 0.6
CCDC78-203ENST00000423653 LARGE1O95461 756 aa18.81■□□□□ 0.6
CCDC78-203ENST00000423653 SSTR3P32745 418 aaPredicted RBP18.81■□□□□ 0.6
CCDC78-203ENST00000423653 PPM1AP35813 382 aa18.81■□□□□ 0.6
CCDC78-203ENST00000423653 NDUFV1P49821 464 aa18.81■□□□□ 0.6
CCDC78-203ENST00000423653 DRP2Q13474 957 aa18.81■□□□□ 0.6
CCDC78-203ENST00000423653 CAMK1Q14012 370 aa18.81■□□□□ 0.6
CCDC78-203ENST00000423653 ANO5Q75V66 913 aa18.81■□□□□ 0.6
CCDC78-203ENST00000423653 ECHDC2Q86YB7 292 aa18.81■□□□□ 0.6
CCDC78-203ENST00000423653 POTEDQ86YR6 584 aa18.81■□□□□ 0.6
CCDC78-203ENST00000423653 NSUN7Q8NE18 718 aaKnown RBP18.81■□□□□ 0.6
CCDC78-203ENST00000423653 RSPH1Q8WYR4 309 aa18.81■□□□□ 0.6
CCDC78-203ENST00000423653 LXNQ9BS40 222 aa18.81■□□□□ 0.6
CCDC78-203ENST00000423653 TLR9Q9NR96 1032 aa18.81■□□□□ 0.6
CCDC78-203ENST00000423653 TYW1Q9NV66 732 aaKnown RBP18.81■□□□□ 0.6
CCDC78-203ENST00000423653 PRKAG3Q9UGI9 489 aa18.81■□□□□ 0.6
CCDC78-203ENST00000423653 MYO7AQ13402 2215 aa18.81■□□□□ 0.6
CCDC78-203ENST00000423653 A0A0U1RQF3 1178 aa18.8■□□□□ 0.6
CCDC78-203ENST00000423653 GAS2O43903 313 aaKnown RBP18.8■□□□□ 0.6
CCDC78-203ENST00000423653 FGF18O76093 207 aa18.8■□□□□ 0.6
CCDC78-203ENST00000423653 DNAJB1P25685 340 aa18.8■□□□□ 0.6
CCDC78-203ENST00000423653 RFC5P40937 340 aa18.8■□□□□ 0.6
CCDC78-203ENST00000423653 POLGP54098 1239 aaPredicted RBP18.8■□□□□ 0.6
CCDC78-203ENST00000423653 NR5A1Q13285 461 aa18.8■□□□□ 0.6
CCDC78-203ENST00000423653 EPHA7Q15375 998 aa18.8■□□□□ 0.6
CCDC78-203ENST00000423653 PLA2G4FQ68DD2 849 aa18.8■□□□□ 0.6
CCDC78-203ENST00000423653 NCAPH2Q6IBW4 605 aa18.8■□□□□ 0.6
CCDC78-203ENST00000423653 PDE12Q6L8Q7 609 aaKnown RBP18.8■□□□□ 0.6
CCDC78-203ENST00000423653 RHPN2Q8IUC4 686 aa18.8■□□□□ 0.6
CCDC78-203ENST00000423653 GJD3Q8N144 294 aa18.8■□□□□ 0.6
CCDC78-203ENST00000423653 RNF169Q8NCN4 708 aa18.8■□□□□ 0.6
CCDC78-203ENST00000423653 SH2D3AQ9BRG2 576 aa18.8■□□□□ 0.6
CCDC78-203ENST00000423653 MRPL9Q9BYD2 267 aaKnown RBP18.8■□□□□ 0.6
CCDC78-203ENST00000423653 IGFLR1Q9H665 355 aa18.8■□□□□ 0.6
CCDC78-203ENST00000423653 CHST12Q9NRB3 414 aa18.8■□□□□ 0.6
CCDC78-203ENST00000423653 SUCLA2Q9P2R7 463 aaPredicted RBP18.8■□□□□ 0.6
CCDC78-203ENST00000423653 TBX10O75333 385 aa18.79■□□□□ 0.6
CCDC78-203ENST00000423653 EOMESO95936 686 aa18.79■□□□□ 0.6
CCDC78-203ENST00000423653 FDPSP14324 419 aaKnown RBP18.79■□□□□ 0.6
CCDC78-203ENST00000423653 FGFR4P22455 802 aa18.79■□□□□ 0.6
CCDC78-203ENST00000423653 LTBRP36941 435 aa18.79■□□□□ 0.6
CCDC78-203ENST00000423653 SMAD4Q13485 552 aaKnown RBP18.79■□□□□ 0.6
CCDC78-203ENST00000423653 OTUD6AQ7L8S5 288 aa18.79■□□□□ 0.6
CCDC78-203ENST00000423653 C4orf19Q8IY42 314 aa18.79■□□□□ 0.6
CCDC78-203ENST00000423653 EFHBQ8N7U6 833 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms