RNA–Protein interactions for RNA: ENST00000422379.2

HPS4-204, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 1,942 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-204ENST00000422379 OTUD6AQ7L8S5 288 aa9.91□□□□□ -0.82
HPS4-204ENST00000422379 CCDC65Q8IXS2 484 aa9.91□□□□□ -0.82
HPS4-204ENST00000422379 PLCD3Q8N3E9 789 aa9.91□□□□□ -0.82
HPS4-204ENST00000422379 LRRC71Q8N4P6 559 aa9.91□□□□□ -0.82
HPS4-204ENST00000422379 ASAP3Q8TDY4 903 aa9.91□□□□□ -0.82
HPS4-204ENST00000422379 EEF2KMTQ96G04 330 aa9.91□□□□□ -0.82
HPS4-204ENST00000422379 STRA6Q9BX79 667 aa9.91□□□□□ -0.82
HPS4-204ENST00000422379 LRRC27Q9C0I9 530 aa9.91□□□□□ -0.82
HPS4-204ENST00000422379 KCND2Q9NZV8 630 aa9.91□□□□□ -0.82
HPS4-204ENST00000422379 CTNND2Q9UQB3 1225 aa9.91□□□□□ -0.82
HPS4-204ENST00000422379 TRPC6Q9Y210 931 aa9.91□□□□□ -0.82
HPS4-204ENST00000422379 Q9Y3F1 56 aa9.91□□□□□ -0.82
HPS4-204ENST00000422379 ZMYM2Q9UBW7 1377 aa9.91□□□□□ -0.82
HPS4-204ENST00000422379 HAS3O00219 553 aa9.9□□□□□ -0.82
HPS4-204ENST00000422379 DKC1O60832 514 aaKnown RBP eCLIP9.9□□□□□ -0.82
HPS4-204ENST00000422379 MAFO75444 373 aaPredicted RBP9.9□□□□□ -0.82
HPS4-204ENST00000422379 PPP1R37O75864 691 aa9.9□□□□□ -0.82
HPS4-204ENST00000422379 DGAT1O75907 488 aa9.9□□□□□ -0.82
HPS4-204ENST00000422379 C22orf31O95567 290 aa9.9□□□□□ -0.82
HPS4-204ENST00000422379 MYCP01106 439 aaPredicted RBP9.9□□□□□ -0.82
HPS4-204ENST00000422379 MYL3P08590 195 aa9.9□□□□□ -0.82
HPS4-204ENST00000422379 SLC26A2P50443 739 aa9.9□□□□□ -0.82
HPS4-204ENST00000422379 IGBP1P78318 339 aa9.9□□□□□ -0.82
HPS4-204ENST00000422379 MTFR1Q15390 333 aa9.9□□□□□ -0.82
HPS4-204ENST00000422379 CXCL17Q6UXB2 119 aa9.9□□□□□ -0.82
HPS4-204ENST00000422379 MYCT1Q8N699 235 aa9.9□□□□□ -0.82
HPS4-204ENST00000422379 LINC01465Q8N7H1 131 aa9.9□□□□□ -0.82
HPS4-204ENST00000422379 SLAIN1Q8ND83 568 aa9.9□□□□□ -0.82
HPS4-204ENST00000422379 KLHDC9Q8NEP7 349 aa9.9□□□□□ -0.82
HPS4-204ENST00000422379 DUSP9Q99956 384 aaKnown RBP9.9□□□□□ -0.82
HPS4-204ENST00000422379 AP5M1Q9H0R1 490 aa9.9□□□□□ -0.82
HPS4-204ENST00000422379 PARVGQ9HBI0 331 aa9.9□□□□□ -0.82
HPS4-204ENST00000422379 XPNPEP3Q9NQH7 507 aa9.9□□□□□ -0.82
HPS4-204ENST00000422379 OLFML3Q9NRN5 406 aa9.9□□□□□ -0.82
HPS4-204ENST00000422379 DDX20Q9UHI6 824 aaKnown RBP9.9□□□□□ -0.82
HPS4-204ENST00000422379 ODF2LQ9ULJ1 636 aa9.9□□□□□ -0.82
HPS4-204ENST00000422379 PYCARDQ9ULZ3 195 aa9.9□□□□□ -0.82
HPS4-204ENST00000422379 LAMA2P24043 3122 aaKnown RBP9.9□□□□□ -0.82
HPS4-204ENST00000422379 GRIN2DO15399 1336 aa9.9□□□□□ -0.82
HPS4-204ENST00000422379 TBCAO75347 108 aaKnown RBP9.9□□□□□ -0.83
HPS4-204ENST00000422379 PRPF6O94906 941 aaKnown RBP9.9□□□□□ -0.83
HPS4-204ENST00000422379 FAM13AO94988 1023 aa9.9□□□□□ -0.83
HPS4-204ENST00000422379 RARBP10826 455 aa9.9□□□□□ -0.83
HPS4-204ENST00000422379 ATP1A3P13637 1013 aa9.9□□□□□ -0.83
HPS4-204ENST00000422379 PLS3P13797 630 aa9.9□□□□□ -0.83
HPS4-204ENST00000422379 GLRA2P23416 452 aa9.9□□□□□ -0.83
HPS4-204ENST00000422379 ARL2P36404 184 aa9.9□□□□□ -0.83
HPS4-204ENST00000422379 NPTX2P47972 431 aa9.9□□□□□ -0.83
HPS4-204ENST00000422379 POLGP54098 1239 aaPredicted RBP9.9□□□□□ -0.83
HPS4-204ENST00000422379 PEX3P56589 373 aa9.9□□□□□ -0.83
HPS4-204ENST00000422379 CHMP4BP1P59074 171 aa9.9□□□□□ -0.83
HPS4-204ENST00000422379 ZNF200P98182 395 aaPredicted RBP9.9□□□□□ -0.83
HPS4-204ENST00000422379 KIAA0753Q2KHM9 967 aa9.9□□□□□ -0.83
HPS4-204ENST00000422379 ZCWPW2Q504Y3 356 aa9.9□□□□□ -0.83
HPS4-204ENST00000422379 COBLL1Q53SF7 1204 aa9.9□□□□□ -0.83
HPS4-204ENST00000422379 HSP90AA4PQ58FG1 418 aa9.9□□□□□ -0.83
HPS4-204ENST00000422379 GNASQ5JWF2 1037 aa9.9□□□□□ -0.83
HPS4-204ENST00000422379 ODR4Q5SWX8 454 aa9.9□□□□□ -0.83
HPS4-204ENST00000422379 TTI2Q6NXR4 508 aa9.9□□□□□ -0.83
HPS4-204ENST00000422379 NELFCDQ8IXH7 590 aa9.9□□□□□ -0.83
HPS4-204ENST00000422379 C17orf53Q8N3J3 647 aaPredicted RBP9.9□□□□□ -0.83
HPS4-204ENST00000422379 NELFBQ8WX92 580 aa9.9□□□□□ -0.83
HPS4-204ENST00000422379 FAM167AQ96KS9 214 aa9.9□□□□□ -0.83
HPS4-204ENST00000422379 XPO4Q9C0E2 1151 aaKnown RBP9.9□□□□□ -0.83
HPS4-204ENST00000422379 UNC93B1Q9H1C4 597 aa9.9□□□□□ -0.83
HPS4-204ENST00000422379 POLR3FQ9H1D9 316 aaPredicted RBP9.9□□□□□ -0.83
HPS4-204ENST00000422379 ATP6V0A4Q9HBG4 840 aa9.9□□□□□ -0.83
HPS4-204ENST00000422379 NRBP2Q9NSY0 501 aa9.9□□□□□ -0.83
HPS4-204ENST00000422379 SETD4Q9NVD3 440 aa9.9□□□□□ -0.83
HPS4-204ENST00000422379 IFNKQ9P0W0 207 aa9.9□□□□□ -0.83
HPS4-204ENST00000422379 USP20Q9Y2K6 914 aa9.9□□□□□ -0.83
HPS4-204ENST00000422379 COL4A3BPQ9Y5P4 624 aa9.9□□□□□ -0.83
HPS4-204ENST00000422379 LOXHD1Q8IVV2 1947 aa9.89□□□□□ -0.83
HPS4-204ENST00000422379 TISP43B9A030 160 aa9.89□□□□□ -0.83
HPS4-204ENST00000422379 SLC16A4O15374 487 aa9.89□□□□□ -0.83
HPS4-204ENST00000422379 HBP1O60381 514 aa9.89□□□□□ -0.83
HPS4-204ENST00000422379 EDN1P05305 212 aa9.89□□□□□ -0.83
HPS4-204ENST00000422379 SMIM10L2AP0DMW4 78 aa9.89□□□□□ -0.83
HPS4-204ENST00000422379 SMIM10L2BP0DMW5 78 aa9.89□□□□□ -0.83
HPS4-204ENST00000422379 CPT1AP50416 773 aa9.89□□□□□ -0.83
HPS4-204ENST00000422379 CLCN3P51790 818 aa9.89□□□□□ -0.83
HPS4-204ENST00000422379 LBX1P52954 281 aa9.89□□□□□ -0.83
HPS4-204ENST00000422379 LRMPQ12912 555 aa9.89□□□□□ -0.83
HPS4-204ENST00000422379 MFSD10Q14728 455 aa9.89□□□□□ -0.83
HPS4-204ENST00000422379 ANKRD40Q6AI12 368 aa9.89□□□□□ -0.83
HPS4-204ENST00000422379 TAS1R3Q7RTX0 852 aa9.89□□□□□ -0.83
HPS4-204ENST00000422379 ZNF720Q7Z2F6 126 aa9.89□□□□□ -0.83
HPS4-204ENST00000422379 IRF2BP1Q8IU81 584 aa9.89□□□□□ -0.83
HPS4-204ENST00000422379 GUF1Q8N442 669 aaKnown RBP9.89□□□□□ -0.83
HPS4-204ENST00000422379 LMBR1Q8WVP7 490 aa9.89□□□□□ -0.83
HPS4-204ENST00000422379 ZNF668Q96K58 619 aaPredicted RBP9.89□□□□□ -0.83
HPS4-204ENST00000422379 CCDC43Q96MW1 224 aaKnown RBP9.89□□□□□ -0.83
HPS4-204ENST00000422379 KCTD10Q9H3F6 313 aa9.89□□□□□ -0.83
HPS4-204ENST00000422379 MRPL44Q9H9J2 332 aaKnown RBP9.89□□□□□ -0.83
HPS4-204ENST00000422379 SAMSN1Q9NSI8 373 aaKnown RBP9.89□□□□□ -0.83
HPS4-204ENST00000422379 FANCLQ9NW38 375 aa9.89□□□□□ -0.83
HPS4-204ENST00000422379 DACH1Q9UI36 760 aa9.89□□□□□ -0.83
HPS4-204ENST00000422379 TGFB1I1O43294 461 aa9.88□□□□□ -0.83
HPS4-204ENST00000422379 OFD1O75665 1012 aa9.88□□□□□ -0.83
HPS4-204ENST00000422379 HSPA1AP0DMV8 641 aaKnown RBP9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms