RNA–Protein interactions for RNA: ENST00000421263.1

VARS2-202, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 460 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-202ENST00000421263 EYA4O95677 639 aa21.29■■□□□ 1
VARS2-202ENST00000421263 FGFR1P11362 822 aa21.29■■□□□ 1
VARS2-202ENST00000421263 ALADP13716 330 aa21.29■■□□□ 1
VARS2-202ENST00000421263 DARSP14868 501 aaKnown RBP21.29■■□□□ 1
VARS2-202ENST00000421263 ZSCAN20P17040 1043 aaPredicted RBP21.29■■□□□ 1
VARS2-202ENST00000421263 IBSPP21815 317 aaPredicted RBP21.29■■□□□ 1
VARS2-202ENST00000421263 TBC1D8BQ0IIM8 1120 aa21.29■■□□□ 1
VARS2-202ENST00000421263 SCRN1Q12765 414 aa21.29■■□□□ 1
VARS2-202ENST00000421263 NONOQ15233 471 aaKnown RBP eCLIP21.29■■□□□ 1
VARS2-202ENST00000421263 XKR3Q5GH77 459 aa21.29■■□□□ 1
VARS2-202ENST00000421263 CASD1Q96PB1 797 aa21.29■■□□□ 1
VARS2-202ENST00000421263 TMEM117Q9H0C3 514 aa21.29■■□□□ 1
VARS2-202ENST00000421263 CLEC1BQ9P126 229 aa21.29■■□□□ 1
VARS2-202ENST00000421263 ARIH1Q9Y4X5 557 aaPredicted RBP21.29■■□□□ 1
VARS2-202ENST00000421263 C5orf42Q9H799 3197 aa21.29■■□□□ 1
VARS2-202ENST00000421263 FGF18O76093 207 aa21.28■■□□□ 1
VARS2-202ENST00000421263 CSPG5O95196 566 aa21.28■■□□□ 1
VARS2-202ENST00000421263 CDC42EP1Q00587 391 aa21.28■■□□□ 1
VARS2-202ENST00000421263 SMAD4Q13485 552 aaKnown RBP21.28■■□□□ 1
VARS2-202ENST00000421263 CSPP1Q1MSJ5 1256 aa21.28■■□□□ 1
VARS2-202ENST00000421263 INF2Q27J81 1249 aa21.28■■□□□ 1
VARS2-202ENST00000421263 SPOUT1Q5T280 376 aaKnown RBP21.28■■□□□ 1
VARS2-202ENST00000421263 LRRC55Q6ZSA7 311 aa21.28■■□□□ 1
VARS2-202ENST00000421263 KRT25Q7Z3Z0 450 aa21.28■■□□□ 1
VARS2-202ENST00000421263 ECHDC2Q86YB7 292 aa21.28■■□□□ 1
VARS2-202ENST00000421263 COLGALT1Q8NBJ5 622 aa21.28■■□□□ 1
VARS2-202ENST00000421263 HCSTQ9UBK5 93 aa21.28■■□□□ 1
VARS2-202ENST00000421263 CD207Q9UJ71 328 aa21.28■■□□□ 1
VARS2-202ENST00000421263 KCNJ14Q9UNX9 436 aa21.28■■□□□ 1
VARS2-202ENST00000421263 A0A0U1RQF3 1178 aa21.27■■□□□ 1
VARS2-202ENST00000421263 HOXA2O43364 376 aa21.27■■□□□ 1
VARS2-202ENST00000421263 PLCB3Q01970 1234 aa21.27■■□□□ 1
VARS2-202ENST00000421263 COASYQ13057 564 aa21.27■■□□□ 1
VARS2-202ENST00000421263 DRP2Q13474 957 aa21.27■■□□□ 1
VARS2-202ENST00000421263 CLUL1Q15846 466 aa21.27■■□□□ 1
VARS2-202ENST00000421263 ZNF668Q96K58 619 aaPredicted RBP21.27■■□□□ 1
VARS2-202ENST00000421263 DDX25Q9UHL0 483 aaKnown RBP21.27■■□□□ 1
VARS2-202ENST00000421263 LZTS1Q9Y250 596 aa21.27■■□□□ 1
VARS2-202ENST00000421263 FAM86C2PA6NEL3 165 aa21.26■□□□□ 0.99
VARS2-202ENST00000421263 FSCN2O14926 492 aa21.26■□□□□ 0.99
VARS2-202ENST00000421263 PFKFB2O60825 505 aa21.26■□□□□ 0.99
VARS2-202ENST00000421263 MAFO75444 373 aaPredicted RBP21.26■□□□□ 0.99
VARS2-202ENST00000421263 CDKL5O76039 1030 aa21.26■□□□□ 0.99
VARS2-202ENST00000421263 LAG3P18627 525 aa21.26■□□□□ 0.99
VARS2-202ENST00000421263 NRIP1P48552 1158 aa21.26■□□□□ 0.99
VARS2-202ENST00000421263 ERVFC1P60507 584 aa21.26■□□□□ 0.99
VARS2-202ENST00000421263 MTERF2Q49AM1 385 aa21.26■□□□□ 0.99
VARS2-202ENST00000421263 PPP4R3AQ6IN85 833 aa21.26■□□□□ 0.99
VARS2-202ENST00000421263 PDE12Q6L8Q7 609 aaKnown RBP21.26■□□□□ 0.99
VARS2-202ENST00000421263 ZNF598Q86UK7 904 aaKnown RBP21.26■□□□□ 0.99
VARS2-202ENST00000421263 FAM20AQ96MK3 541 aa21.26■□□□□ 0.99
VARS2-202ENST00000421263 SLKQ9H2G2 1235 aaPredicted RBP21.26■□□□□ 0.99
VARS2-202ENST00000421263 KCNMB3Q9NPA1 279 aa21.26■□□□□ 0.99
VARS2-202ENST00000421263 TLR9Q9NR96 1032 aa21.26■□□□□ 0.99
VARS2-202ENST00000421263 SEPT9Q9UHD8 586 aaPredicted RBP21.26■□□□□ 0.99
VARS2-202ENST00000421263 TPCN1Q9ULQ1 816 aa21.26■□□□□ 0.99
VARS2-202ENST00000421263 PCDHGC5Q9Y5F6 944 aa21.26■□□□□ 0.99
VARS2-202ENST00000421263 STK36Q9NRP7 1315 aa21.26■□□□□ 0.99
VARS2-202ENST00000421263 TMEM150BA6NC51 233 aa21.25■□□□□ 0.99
VARS2-202ENST00000421263 EML1O00423 815 aa21.25■□□□□ 0.99
VARS2-202ENST00000421263 SLC37A4O43826 429 aa21.25■□□□□ 0.99
VARS2-202ENST00000421263 GLP2RO95838 553 aa21.25■□□□□ 0.99
VARS2-202ENST00000421263 EOMESO95936 686 aa21.25■□□□□ 0.99
VARS2-202ENST00000421263 NDUFV1P49821 464 aa21.25■□□□□ 0.99
VARS2-202ENST00000421263 PSMC5P62195 406 aa21.25■□□□□ 0.99
VARS2-202ENST00000421263 PPP2R5CQ13362 524 aa21.25■□□□□ 0.99
VARS2-202ENST00000421263 ANO5Q75V66 913 aa21.25■□□□□ 0.99
VARS2-202ENST00000421263 RBM23Q86U06 439 aaKnown RBP21.25■□□□□ 0.99
VARS2-202ENST00000421263 THNSL1Q8IYQ7 743 aa21.25■□□□□ 0.99
VARS2-202ENST00000421263 TLE6Q9H808 572 aa21.25■□□□□ 0.99
VARS2-202ENST00000421263 CHST12Q9NRB3 414 aa21.25■□□□□ 0.99
VARS2-202ENST00000421263 VAV3Q9UKW4 847 aa21.25■□□□□ 0.99
VARS2-202ENST00000421263 PRR33A8MZF0 331 aa21.24■□□□□ 0.99
VARS2-202ENST00000421263 DCXO43602 365 aa21.24■□□□□ 0.99
VARS2-202ENST00000421263 CTDNEP1O95476 244 aa21.24■□□□□ 0.99
VARS2-202ENST00000421263 FGFR4P22455 802 aa21.24■□□□□ 0.99
VARS2-202ENST00000421263 PLA2G5P39877 138 aa21.24■□□□□ 0.99
VARS2-202ENST00000421263 DNM2P50570 870 aa21.24■□□□□ 0.99
VARS2-202ENST00000421263 ANAPC15P60006 121 aa21.24■□□□□ 0.99
VARS2-202ENST00000421263 LETM2Q2VYF4 491 aa21.24■□□□□ 0.99
VARS2-202ENST00000421263 SMRP1Q8NCR6 262 aa21.24■□□□□ 0.99
VARS2-202ENST00000421263 MICAL1Q8TDZ2 1067 aa21.24■□□□□ 0.99
VARS2-202ENST00000421263 NLRP7Q8WX94 980 aa21.24■□□□□ 0.99
VARS2-202ENST00000421263 MRPS27Q92552 414 aaKnown RBP21.24■□□□□ 0.99
VARS2-202ENST00000421263 SH2D3AQ9BRG2 576 aa21.24■□□□□ 0.99
VARS2-202ENST00000421263 TRAIPQ9BWF2 469 aa21.24■□□□□ 0.99
VARS2-202ENST00000421263 GCOM2Q9BZD3 368 aaPredicted RBP21.24■□□□□ 0.99
VARS2-202ENST00000421263 CCDC194A0A1B0GVG4 234 aa21.23■□□□□ 0.99
VARS2-202ENST00000421263 DDX11L8A8MPP1 907 aa21.23■□□□□ 0.99
VARS2-202ENST00000421263 TBX3O15119 743 aa21.23■□□□□ 0.99
VARS2-202ENST00000421263 CSDE1O75534 798 aaKnown RBP21.23■□□□□ 0.99
VARS2-202ENST00000421263 GCFC2P16383 781 aaKnown RBP21.23■□□□□ 0.99
VARS2-202ENST00000421263 ATF7P17544 494 aaPredicted RBP21.23■□□□□ 0.99
VARS2-202ENST00000421263 XBP1P17861 261 aa21.23■□□□□ 0.99
VARS2-202ENST00000421263 KCNC3Q14003 757 aa21.23■□□□□ 0.99
VARS2-202ENST00000421263 CLLU1OSQ5K130 101 aa21.23■□□□□ 0.99
VARS2-202ENST00000421263 KCNT2Q6UVM3 1135 aa21.23■□□□□ 0.99
VARS2-202ENST00000421263 NEK8Q86SG6 692 aa21.23■□□□□ 0.99
VARS2-202ENST00000421263 POP1Q99575 1024 aaKnown RBP21.23■□□□□ 0.99
VARS2-202ENST00000421263 CDCA3Q99618 268 aaPredicted RBP21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms