RNA–Protein interactions for RNA: ENST00000420746.1

TRIM39-206, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 708 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-206ENST00000420746 IGBP1P78318 339 aa10.4□□□□□ -0.74
TRIM39-206ENST00000420746 C1QBPQ07021 282 aaKnown RBP10.4□□□□□ -0.74
TRIM39-206ENST00000420746 TMEM62Q0P6H9 643 aa10.4□□□□□ -0.74
TRIM39-206ENST00000420746 TRAF1Q13077 416 aa10.4□□□□□ -0.74
TRIM39-206ENST00000420746 HTR4Q13639 388 aa10.4□□□□□ -0.74
TRIM39-206ENST00000420746 ALX1Q15699 326 aa10.4□□□□□ -0.74
TRIM39-206ENST00000420746 ELMSAN1Q6PJG2 1045 aa10.4□□□□□ -0.74
TRIM39-206ENST00000420746 MAMSTRQ6ZN01 415 aa10.4□□□□□ -0.74
TRIM39-206ENST00000420746 DDX53Q86TM3 631 aaKnown RBP10.4□□□□□ -0.74
TRIM39-206ENST00000420746 DGKHQ86XP1 1220 aa10.4□□□□□ -0.74
TRIM39-206ENST00000420746 MAP4K1Q92918 833 aa10.4□□□□□ -0.74
TRIM39-206ENST00000420746 MYADMQ96S97 322 aa10.4□□□□□ -0.74
TRIM39-206ENST00000420746 NELL2Q99435 816 aa10.4□□□□□ -0.74
TRIM39-206ENST00000420746 MYL10Q9BUA6 226 aa10.4□□□□□ -0.74
TRIM39-206ENST00000420746 TMEM121BQ9BXQ6 578 aaPredicted RBP10.4□□□□□ -0.74
TRIM39-206ENST00000420746 EMILIN2Q9BXX0 1053 aa10.4□□□□□ -0.74
TRIM39-206ENST00000420746 MRPL9Q9BYD2 267 aaKnown RBP10.4□□□□□ -0.74
TRIM39-206ENST00000420746 BCL11AQ9H165 835 aa10.4□□□□□ -0.74
TRIM39-206ENST00000420746 JMJD4Q9H9V9 463 aa10.4□□□□□ -0.74
TRIM39-206ENST00000420746 LTB4R2Q9NPC1 389 aa10.4□□□□□ -0.74
TRIM39-206ENST00000420746 TOMM22Q9NS69 142 aa10.4□□□□□ -0.74
TRIM39-206ENST00000420746 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.4□□□□□ -0.74
TRIM39-206ENST00000420746 DPP7Q9UHL4 492 aa10.4□□□□□ -0.74
TRIM39-206ENST00000420746 ST3GAL5Q9UNP4 418 aa10.4□□□□□ -0.74
TRIM39-206ENST00000420746 NOC2LQ9Y3T9 749 aaKnown RBP10.4□□□□□ -0.74
TRIM39-206ENST00000420746 TELO2Q9Y4R8 837 aa10.4□□□□□ -0.74
TRIM39-206ENST00000420746 ZFP37Q9Y6Q3 630 aaPredicted RBP10.4□□□□□ -0.74
TRIM39-206ENST00000420746 IGF2RP11717 2491 aa10.4□□□□□ -0.75
TRIM39-206ENST00000420746 ATXN8OSP0DMR3 200 aa10.39□□□□□ -0.75
TRIM39-206ENST00000420746 TDGF1P13385 188 aa10.39□□□□□ -0.75
TRIM39-206ENST00000420746 LAMP2P13473 410 aa10.39□□□□□ -0.75
TRIM39-206ENST00000420746 SP4Q02446 784 aa10.39□□□□□ -0.75
TRIM39-206ENST00000420746 DSC3Q14574 896 aa10.39□□□□□ -0.75
TRIM39-206ENST00000420746 PPP2R5DQ14738 602 aa10.39□□□□□ -0.75
TRIM39-206ENST00000420746 MLF2Q15773 248 aaPredicted RBP10.39□□□□□ -0.75
TRIM39-206ENST00000420746 RRP12Q5JTH9 1297 aaKnown RBP10.39□□□□□ -0.75
TRIM39-206ENST00000420746 ZMYM1Q5SVZ6 1142 aa10.39□□□□□ -0.75
TRIM39-206ENST00000420746 MTMR8Q96EF0 704 aa10.39□□□□□ -0.75
TRIM39-206ENST00000420746 GPATCH3Q96I76 525 aa10.39□□□□□ -0.75
TRIM39-206ENST00000420746 ZFP91Q96JP5 570 aaPredicted RBP10.39□□□□□ -0.75
TRIM39-206ENST00000420746 KLHL5Q96PQ7 755 aa10.39□□□□□ -0.75
TRIM39-206ENST00000420746 IER2Q9BTL4 223 aa10.39□□□□□ -0.75
TRIM39-206ENST00000420746 ITPR1Q14643 2758 aa10.39□□□□□ -0.75
TRIM39-206ENST00000420746 MIA3Q5JRA6 1907 aa10.39□□□□□ -0.75
TRIM39-206ENST00000420746 LOC400499M0QZD8 3231 aa10.38□□□□□ -0.75
TRIM39-206ENST00000420746 BPTFQ12830 3046 aa10.38□□□□□ -0.75
TRIM39-206ENST00000420746 GSTTP1A0A1W2PQM5 241 aa10.38□□□□□ -0.75
TRIM39-206ENST00000420746 FAM170BA6NMN3 283 aa10.38□□□□□ -0.75
TRIM39-206ENST00000420746 DHX16O60231 1041 aaKnown RBP10.38□□□□□ -0.75
TRIM39-206ENST00000420746 GDF9O60383 454 aa10.38□□□□□ -0.75
TRIM39-206ENST00000420746 METAP2P50579 478 aaKnown RBP eCLIP10.38□□□□□ -0.75
TRIM39-206ENST00000420746 BCAR1P56945 870 aa10.38□□□□□ -0.75
TRIM39-206ENST00000420746 UBXN2BQ14CS0 331 aa10.38□□□□□ -0.75
TRIM39-206ENST00000420746 WTAPQ15007 396 aa10.38□□□□□ -0.75
TRIM39-206ENST00000420746 ZBTB41Q5SVQ8 909 aa10.38□□□□□ -0.75
TRIM39-206ENST00000420746 SIRT2Q8IXJ6 389 aa10.38□□□□□ -0.75
TRIM39-206ENST00000420746 PNMA1Q8ND90 353 aa10.38□□□□□ -0.75
TRIM39-206ENST00000420746 TMEM40Q8WWA1 233 aa10.38□□□□□ -0.75
TRIM39-206ENST00000420746 BBXQ8WY36 941 aaPredicted RBP10.38□□□□□ -0.75
TRIM39-206ENST00000420746 ZBTB10Q96DT7 871 aa10.38□□□□□ -0.75
TRIM39-206ENST00000420746 CDHR1Q96JP9 859 aa10.38□□□□□ -0.75
TRIM39-206ENST00000420746 LRRCC1Q9C099 1032 aa10.38□□□□□ -0.75
TRIM39-206ENST00000420746 NUMBLQ9Y6R0 609 aa10.38□□□□□ -0.75
TRIM39-206ENST00000420746 WDFY3Q8IZQ1 3526 aa10.38□□□□□ -0.75
TRIM39-206ENST00000420746 DMXL2Q8TDJ6 3036 aa10.38□□□□□ -0.75
TRIM39-206ENST00000420746 ZBTB5O15062 677 aa10.37□□□□□ -0.75
TRIM39-206ENST00000420746 KCNA2P16389 499 aa10.37□□□□□ -0.75
TRIM39-206ENST00000420746 KLRC2P26717 231 aa10.37□□□□□ -0.75
TRIM39-206ENST00000420746 GPC5P78333 572 aa10.37□□□□□ -0.75
TRIM39-206ENST00000420746 PFKPQ01813 784 aa10.37□□□□□ -0.75
TRIM39-206ENST00000420746 SNW1Q13573 536 aaKnown RBP10.37□□□□□ -0.75
TRIM39-206ENST00000420746 CCDC178Q5BJE1 867 aa10.37□□□□□ -0.75
TRIM39-206ENST00000420746 PCNX4Q63HM2 1172 aa10.37□□□□□ -0.75
TRIM39-206ENST00000420746 TSSK4Q6SA08 328 aa10.37□□□□□ -0.75
TRIM39-206ENST00000420746 MTHFD1LQ6UB35 978 aa10.37□□□□□ -0.75
TRIM39-206ENST00000420746 NLRX1Q86UT6 975 aa10.37□□□□□ -0.75
TRIM39-206ENST00000420746 FAM228AQ86W67 206 aa10.37□□□□□ -0.75
TRIM39-206ENST00000420746 FCHSD1Q86WN1 690 aa10.37□□□□□ -0.75
TRIM39-206ENST00000420746 ECHDC2Q86YB7 292 aa10.37□□□□□ -0.75
TRIM39-206ENST00000420746 AUTS2Q8WXX7 1259 aa10.37□□□□□ -0.75
TRIM39-206ENST00000420746 GPRASP2Q96D09 838 aa10.37□□□□□ -0.75
TRIM39-206ENST00000420746 IGSF21Q96ID5 467 aa10.37□□□□□ -0.75
TRIM39-206ENST00000420746 SMG1Q96Q15 3661 aaKnown RBP10.37□□□□□ -0.75
TRIM39-206ENST00000420746 RXFP3Q9NSD7 469 aa10.37□□□□□ -0.75
TRIM39-206ENST00000420746 IGSF5Q9NSI5 407 aa10.37□□□□□ -0.75
TRIM39-206ENST00000420746 WASF3Q9UPY6 502 aa10.37□□□□□ -0.75
TRIM39-206ENST00000420746 MTF2Q9Y483 593 aaPredicted RBP10.37□□□□□ -0.75
TRIM39-206ENST00000420746 C2orf16Q68DN1 1984 aa10.37□□□□□ -0.75
TRIM39-206ENST00000420746 ZMYM6O95789 1325 aa10.36□□□□□ -0.75
TRIM39-206ENST00000420746 HELZ2Q9BYK8 2649 aaKnown RBP10.36□□□□□ -0.75
TRIM39-206ENST00000420746 CCDC195A0A1B0GUA6 201 aa10.36□□□□□ -0.75
TRIM39-206ENST00000420746 PPP1R11O60927 126 aaPredicted RBP10.36□□□□□ -0.75
TRIM39-206ENST00000420746 KCNK5O95279 499 aa10.36□□□□□ -0.75
TRIM39-206ENST00000420746 C1RP00736 705 aa10.36□□□□□ -0.75
TRIM39-206ENST00000420746 PARP1P09874 1014 aaKnown RBP10.36□□□□□ -0.75
TRIM39-206ENST00000420746 CNR2P34972 360 aa10.36□□□□□ -0.75
TRIM39-206ENST00000420746 CRYBB1P53674 252 aaPredicted RBP10.36□□□□□ -0.75
TRIM39-206ENST00000420746 PLCB4Q15147 1175 aa10.36□□□□□ -0.75
TRIM39-206ENST00000420746 SLC44A4Q53GD3 710 aa10.36□□□□□ -0.75
TRIM39-206ENST00000420746 CLLU1OSQ5K130 101 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms