RNA–Protein interactions for RNA: ENST00000420482.5

PTPN4-202, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-202ENST00000420482 INO80BQ9C086 356 aaPredicted RBP23.96■■□□□ 1.43
PTPN4-202ENST00000420482 ADAMTS10Q9H324 1103 aa23.96■■□□□ 1.43
PTPN4-202ENST00000420482 MYO7AQ13402 2215 aa23.95■■□□□ 1.42
PTPN4-202ENST00000420482 DDX11L8A8MPP1 907 aa23.95■■□□□ 1.42
PTPN4-202ENST00000420482 BAG4O95429 457 aaKnown RBP23.95■■□□□ 1.42
PTPN4-202ENST00000420482 FAM189BP81408 668 aa23.95■■□□□ 1.42
PTPN4-202ENST00000420482 PPP2R5CQ13362 524 aa23.95■■□□□ 1.42
PTPN4-202ENST00000420482 COL19A1Q14993 1142 aa23.95■■□□□ 1.42
PTPN4-202ENST00000420482 TARBP2Q15633 366 aaKnown RBP23.95■■□□□ 1.42
PTPN4-202ENST00000420482 FAM122AQ96E09 287 aa23.95■■□□□ 1.42
PTPN4-202ENST00000420482 DACT1Q9NYF0 836 aa23.95■■□□□ 1.42
PTPN4-202ENST00000420482 GRXCR2A6NFK2 248 aa23.94■■□□□ 1.42
PTPN4-202ENST00000420482 H3BQ06 376 aaPredicted RBP23.94■■□□□ 1.42
PTPN4-202ENST00000420482 SLC37A4O43826 429 aa23.94■■□□□ 1.42
PTPN4-202ENST00000420482 ITGB1P05556 798 aa23.94■■□□□ 1.42
PTPN4-202ENST00000420482 CENPBP07199 599 aaPredicted RBP23.94■■□□□ 1.42
PTPN4-202ENST00000420482 DARSP14868 501 aaKnown RBP23.94■■□□□ 1.42
PTPN4-202ENST00000420482 KRT2P35908 639 aa23.94■■□□□ 1.42
PTPN4-202ENST00000420482 QARSP47897 775 aaKnown RBP23.94■■□□□ 1.42
PTPN4-202ENST00000420482 UBE3AQ05086 875 aa23.94■■□□□ 1.42
PTPN4-202ENST00000420482 TRIM29Q14134 588 aa23.94■■□□□ 1.42
PTPN4-202ENST00000420482 DSC3Q14574 896 aa23.94■■□□□ 1.42
PTPN4-202ENST00000420482 TMEM31Q5JXX7 168 aa23.94■■□□□ 1.42
PTPN4-202ENST00000420482 SPPL3Q8TCT6 385 aa23.94■■□□□ 1.42
PTPN4-202ENST00000420482 KCNMB3Q9NPA1 279 aa23.94■■□□□ 1.42
PTPN4-202ENST00000420482 CD320Q9NPF0 282 aa23.94■■□□□ 1.42
PTPN4-202ENST00000420482 PPME1Q9Y570 386 aa23.94■■□□□ 1.42
PTPN4-202ENST00000420482 CSPG5O95196 566 aa23.93■■□□□ 1.42
PTPN4-202ENST00000420482 LAG3P18627 525 aa23.93■■□□□ 1.42
PTPN4-202ENST00000420482 SFPQP23246 707 aaKnown RBP eCLIP23.93■■□□□ 1.42
PTPN4-202ENST00000420482 GATMP50440 423 aa23.93■■□□□ 1.42
PTPN4-202ENST00000420482 NEK4P51957 841 aa23.93■■□□□ 1.42
PTPN4-202ENST00000420482 FAM102BQ5T8I3 360 aa23.93■■□□□ 1.42
PTPN4-202ENST00000420482 SLFN12Q8IYM2 578 aa23.93■■□□□ 1.42
PTPN4-202ENST00000420482 POF1BQ8WVV4 589 aa23.93■■□□□ 1.42
PTPN4-202ENST00000420482 GTF3C6Q969F1 213 aa23.93■■□□□ 1.42
PTPN4-202ENST00000420482 TMEM117Q9H0C3 514 aa23.93■■□□□ 1.42
PTPN4-202ENST00000420482 ARIH1Q9Y4X5 557 aaPredicted RBP23.93■■□□□ 1.42
PTPN4-202ENST00000420482 KIAA1671Q9BY89 1806 aa23.93■■□□□ 1.42
PTPN4-202ENST00000420482 FSD2A1L4K1 749 aa23.92■■□□□ 1.42
PTPN4-202ENST00000420482 MAFO75444 373 aaPredicted RBP23.92■■□□□ 1.42
PTPN4-202ENST00000420482 P4HBP07237 508 aaKnown RBP23.92■■□□□ 1.42
PTPN4-202ENST00000420482 SSTR3P32745 418 aaPredicted RBP23.92■■□□□ 1.42
PTPN4-202ENST00000420482 HYAL1Q12794 435 aa23.92■■□□□ 1.42
PTPN4-202ENST00000420482 ZNF410Q86VK4 478 aa23.92■■□□□ 1.42
PTPN4-202ENST00000420482 FAM178BQ8IXR5 827 aa23.92■■□□□ 1.42
PTPN4-202ENST00000420482 THNSL1Q8IYQ7 743 aa23.92■■□□□ 1.42
PTPN4-202ENST00000420482 SLC7A3Q8WY07 619 aa23.92■■□□□ 1.42
PTPN4-202ENST00000420482 IGFLR1Q9H665 355 aa23.92■■□□□ 1.42
PTPN4-202ENST00000420482 C11orf16Q9NQ32 467 aa23.92■■□□□ 1.42
PTPN4-202ENST00000420482 CHST12Q9NRB3 414 aa23.92■■□□□ 1.42
PTPN4-202ENST00000420482 IGKV6-21A0A0C4DH24 114 aa23.91■■□□□ 1.42
PTPN4-202ENST00000420482 GPR37L1O60883 481 aa23.91■■□□□ 1.42
PTPN4-202ENST00000420482 CTDNEP1O95476 244 aa23.91■■□□□ 1.42
PTPN4-202ENST00000420482 EOMESO95936 686 aa23.91■■□□□ 1.42
PTPN4-202ENST00000420482 IL9P15248 144 aa23.91■■□□□ 1.42
PTPN4-202ENST00000420482 ME3Q16798 604 aa23.91■■□□□ 1.42
PTPN4-202ENST00000420482 CTC1Q2NKJ3 1217 aa23.91■■□□□ 1.42
PTPN4-202ENST00000420482 OTUD6AQ7L8S5 288 aa23.91■■□□□ 1.42
PTPN4-202ENST00000420482 MICAL1Q8TDZ2 1067 aa23.91■■□□□ 1.42
PTPN4-202ENST00000420482 RSPH1Q8WYR4 309 aa23.91■■□□□ 1.42
PTPN4-202ENST00000420482 TYW1Q9NV66 732 aaKnown RBP23.91■■□□□ 1.42
PTPN4-202ENST00000420482 SUCLA2Q9P2R7 463 aaPredicted RBP23.91■■□□□ 1.42
PTPN4-202ENST00000420482 PRKAG3Q9UGI9 489 aa23.91■■□□□ 1.42
PTPN4-202ENST00000420482 VAV3Q9UKW4 847 aa23.91■■□□□ 1.42
PTPN4-202ENST00000420482 PI4K2BG5E9Z4 385 aa23.9■■□□□ 1.42
PTPN4-202ENST00000420482 FGFR1P11362 822 aa23.9■■□□□ 1.42
PTPN4-202ENST00000420482 SKIP12755 728 aa23.9■■□□□ 1.42
PTPN4-202ENST00000420482 PDE12Q6L8Q7 609 aaKnown RBP23.9■■□□□ 1.42
PTPN4-202ENST00000420482 ECHDC2Q86YB7 292 aa23.9■■□□□ 1.42
PTPN4-202ENST00000420482 RHPN2Q8IUC4 686 aa23.9■■□□□ 1.42
PTPN4-202ENST00000420482 GJD3Q8N144 294 aa23.9■■□□□ 1.42
PTPN4-202ENST00000420482 LRRC43Q8N309 656 aa23.9■■□□□ 1.42
PTPN4-202ENST00000420482 NECAB1Q8N987 351 aa23.9■■□□□ 1.42
PTPN4-202ENST00000420482 OXER1Q8TDS5 423 aa23.9■■□□□ 1.42
PTPN4-202ENST00000420482 ZNF668Q96K58 619 aaPredicted RBP23.9■■□□□ 1.42
PTPN4-202ENST00000420482 CYP26B1Q9NR63 512 aa23.9■■□□□ 1.42
PTPN4-202ENST00000420482 GJB4Q9NTQ9 266 aa23.9■■□□□ 1.42
PTPN4-202ENST00000420482 PUF60Q9UHX1 559 aaKnown RBP23.9■■□□□ 1.42
PTPN4-202ENST00000420482 HCN4Q9Y3Q4 1203 aa23.9■■□□□ 1.42
PTPN4-202ENST00000420482 FNDC1Q4ZHG4 1894 aaPredicted RBP23.9■■□□□ 1.42
PTPN4-202ENST00000420482 A0A0U1RQF3 1178 aa23.89■■□□□ 1.41
PTPN4-202ENST00000420482 FGF18O76093 207 aa23.89■■□□□ 1.41
PTPN4-202ENST00000420482 STBD1O95210 358 aa23.89■■□□□ 1.41
PTPN4-202ENST00000420482 PPM1AP35813 382 aa23.89■■□□□ 1.41
PTPN4-202ENST00000420482 NDUFV1P49821 464 aa23.89■■□□□ 1.41
PTPN4-202ENST00000420482 CAMK1Q14012 370 aa23.89■■□□□ 1.41
PTPN4-202ENST00000420482 EPHA7Q15375 998 aa23.89■■□□□ 1.41
PTPN4-202ENST00000420482 ANO5Q75V66 913 aa23.89■■□□□ 1.41
PTPN4-202ENST00000420482 COLGALT1Q8NBJ5 622 aa23.89■■□□□ 1.41
PTPN4-202ENST00000420482 RNF169Q8NCN4 708 aa23.89■■□□□ 1.41
PTPN4-202ENST00000420482 CEP170P1Q96L14 293 aa23.89■■□□□ 1.41
PTPN4-202ENST00000420482 TLR9Q9NR96 1032 aa23.89■■□□□ 1.41
PTPN4-202ENST00000420482 TMEM150BA6NC51 233 aa23.88■■□□□ 1.41
PTPN4-202ENST00000420482 EML1O00423 815 aa23.88■■□□□ 1.41
PTPN4-202ENST00000420482 GAS2O43903 313 aaKnown RBP23.88■■□□□ 1.41
PTPN4-202ENST00000420482 RFC5P40937 340 aa23.88■■□□□ 1.41
PTPN4-202ENST00000420482 POLGP54098 1239 aaPredicted RBP23.88■■□□□ 1.41
PTPN4-202ENST00000420482 CEP89Q96ST8 783 aa23.88■■□□□ 1.41
PTPN4-202ENST00000420482 SH2D3AQ9BRG2 576 aa23.88■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms