RNA–Protein interactions for RNA: ENST00000419110.5

HMGB3-202, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 3

Gene HMGB3, Length 707 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-202ENST00000419110 AFAP1L1Q8TED9 768 aa6.58□□□□□ -1.36
HMGB3-202ENST00000419110 SLC7A3Q8WY07 619 aa6.58□□□□□ -1.36
HMGB3-202ENST00000419110 SEPT1Q8WYJ6 367 aa6.58□□□□□ -1.36
HMGB3-202ENST00000419110 GLG1Q92896 1179 aa6.58□□□□□ -1.36
HMGB3-202ENST00000419110 EMID1Q96A84 441 aaPredicted RBP6.58□□□□□ -1.36
HMGB3-202ENST00000419110 CEP170P1Q96L14 293 aa6.58□□□□□ -1.36
HMGB3-202ENST00000419110 CNOT6LQ96LI5 555 aaKnown RBP6.58□□□□□ -1.36
HMGB3-202ENST00000419110 JPH2Q9BR39 696 aaPredicted RBP6.58□□□□□ -1.36
HMGB3-202ENST00000419110 XPO4Q9C0E2 1151 aaKnown RBP6.58□□□□□ -1.36
HMGB3-202ENST00000419110 R3HDMLQ9H3Y0 253 aa6.58□□□□□ -1.36
HMGB3-202ENST00000419110 TBC1D7Q9P0N9 293 aa6.58□□□□□ -1.36
HMGB3-202ENST00000419110 IFNKQ9P0W0 207 aa6.58□□□□□ -1.36
HMGB3-202ENST00000419110 DDX41Q9UJV9 622 aaKnown RBP6.58□□□□□ -1.36
HMGB3-202ENST00000419110 MAPK8IP1Q9UQF2 711 aa6.58□□□□□ -1.36
HMGB3-202ENST00000419110 TRIP12Q14669 1992 aaPredicted RBP6.58□□□□□ -1.36
HMGB3-202ENST00000419110 ZMYM2Q9UBW7 1377 aa6.57□□□□□ -1.36
HMGB3-202ENST00000419110 PHLPP2Q6ZVD8 1323 aa6.57□□□□□ -1.36
HMGB3-202ENST00000419110 RSPH10B2B2RC85 870 aa6.57□□□□□ -1.36
HMGB3-202ENST00000419110 PES1O00541 588 aaKnown RBP6.57□□□□□ -1.36
HMGB3-202ENST00000419110 CALUO43852 315 aaPredicted RBP6.57□□□□□ -1.36
HMGB3-202ENST00000419110 ZNF862O60290 1169 aa6.57□□□□□ -1.36
HMGB3-202ENST00000419110 LGR5O75473 907 aa6.57□□□□□ -1.36
HMGB3-202ENST00000419110 GNA14O95837 355 aa6.57□□□□□ -1.36
HMGB3-202ENST00000419110 TPM1P09493 284 aa6.57□□□□□ -1.36
HMGB3-202ENST00000419110 RSPH10BP0C881 870 aa6.57□□□□□ -1.36
HMGB3-202ENST00000419110 MAPTP10636 758 aaKnown RBP6.57□□□□□ -1.36
HMGB3-202ENST00000419110 ATP1A3P13637 1013 aa6.57□□□□□ -1.36
HMGB3-202ENST00000419110 PLS3P13797 630 aa6.57□□□□□ -1.36
HMGB3-202ENST00000419110 SCP2P22307 547 aa6.57□□□□□ -1.36
HMGB3-202ENST00000419110 MTIF2P46199 727 aaKnown RBP6.57□□□□□ -1.36
HMGB3-202ENST00000419110 SMTNP53814 917 aa6.57□□□□□ -1.36
HMGB3-202ENST00000419110 UBASH3AP57075 661 aa6.57□□□□□ -1.36
HMGB3-202ENST00000419110 GSDMDP57764 484 aa6.57□□□□□ -1.36
HMGB3-202ENST00000419110 ARHGAP1Q07960 439 aa6.57□□□□□ -1.36
HMGB3-202ENST00000419110 HSP90AA2PQ14568 343 aaPredicted RBP6.57□□□□□ -1.36
HMGB3-202ENST00000419110 LY6KQ17RY6 165 aa6.57□□□□□ -1.36
HMGB3-202ENST00000419110 DEFB115Q30KQ5 88 aa6.57□□□□□ -1.36
HMGB3-202ENST00000419110 EDRF1Q3B7T1 1238 aa6.57□□□□□ -1.36
HMGB3-202ENST00000419110 CCDC40Q4G0X9 1142 aa6.57□□□□□ -1.36
HMGB3-202ENST00000419110 HS1BP3Q53T59 392 aa6.57□□□□□ -1.36
HMGB3-202ENST00000419110 BRDTQ58F21 947 aaPredicted RBP6.57□□□□□ -1.36
HMGB3-202ENST00000419110 HSP90AA4PQ58FG1 418 aa6.57□□□□□ -1.36
HMGB3-202ENST00000419110 ARSHQ5FYA8 562 aa6.57□□□□□ -1.36
HMGB3-202ENST00000419110 FAM102BQ5T8I3 360 aa6.57□□□□□ -1.36
HMGB3-202ENST00000419110 SWSAP1Q6NVH7 229 aa6.57□□□□□ -1.36
HMGB3-202ENST00000419110 CCDC62Q6P9F0 684 aa6.57□□□□□ -1.36
HMGB3-202ENST00000419110 LAPTM4BQ86VI4 370 aa6.57□□□□□ -1.36
HMGB3-202ENST00000419110 NELFCDQ8IXH7 590 aa6.57□□□□□ -1.36
HMGB3-202ENST00000419110 EXOC8Q8IYI6 725 aa6.57□□□□□ -1.36
HMGB3-202ENST00000419110 SPC24Q8NBT2 197 aa6.57□□□□□ -1.36
HMGB3-202ENST00000419110 OR6J1Q8NGC5 347 aa6.57□□□□□ -1.36
HMGB3-202ENST00000419110 PPTC7Q8NI37 304 aa6.57□□□□□ -1.36
HMGB3-202ENST00000419110 ATP8B4Q8TF62 1192 aa6.57□□□□□ -1.36
HMGB3-202ENST00000419110 HPS3Q969F9 1004 aa6.57□□□□□ -1.36
HMGB3-202ENST00000419110 IFT74Q96LB3 600 aa6.57□□□□□ -1.36
HMGB3-202ENST00000419110 CEP63Q96MT8 703 aa6.57□□□□□ -1.36
HMGB3-202ENST00000419110 GPR20Q99678 358 aa6.57□□□□□ -1.36
HMGB3-202ENST00000419110 POLR3FQ9H1D9 316 aaPredicted RBP6.57□□□□□ -1.36
HMGB3-202ENST00000419110 SMARCAD1Q9H4L7 1026 aa6.57□□□□□ -1.36
HMGB3-202ENST00000419110 C17orf75Q9HAS0 396 aa6.57□□□□□ -1.36
HMGB3-202ENST00000419110 CYP26B1Q9NR63 512 aa6.57□□□□□ -1.36
HMGB3-202ENST00000419110 TYW1Q9NV66 732 aaKnown RBP6.57□□□□□ -1.36
HMGB3-202ENST00000419110 FANCLQ9NW38 375 aa6.57□□□□□ -1.36
HMGB3-202ENST00000419110 NRBP1Q9UHY1 535 aa6.57□□□□□ -1.36
HMGB3-202ENST00000419110 EXOC7Q9UPT5 735 aa6.57□□□□□ -1.36
HMGB3-202ENST00000419110 IGKV6D-21A0A0A0MT36 114 aa6.56□□□□□ -1.36
HMGB3-202ENST00000419110 GSTTP1A0A1W2PQM5 241 aa6.56□□□□□ -1.36
HMGB3-202ENST00000419110 RBM47A0AV96 593 aaKnown RBP6.56□□□□□ -1.36
HMGB3-202ENST00000419110 TMEM150BA6NC51 233 aa6.56□□□□□ -1.36
HMGB3-202ENST00000419110 LGALS16A8MUM7 142 aa6.56□□□□□ -1.36
HMGB3-202ENST00000419110 SLC16A3O15427 465 aaKnown RBP6.56□□□□□ -1.36
HMGB3-202ENST00000419110 AOC2O75106 756 aa6.56□□□□□ -1.36
HMGB3-202ENST00000419110 ATG7O95352 703 aa6.56□□□□□ -1.36
HMGB3-202ENST00000419110 LGALS2P05162 132 aa6.56□□□□□ -1.36
HMGB3-202ENST00000419110 MMP3P08254 477 aa6.56□□□□□ -1.36
HMGB3-202ENST00000419110 ZNF286BP0CG31 522 aa6.56□□□□□ -1.36
HMGB3-202ENST00000419110 MYBP10242 640 aa6.56□□□□□ -1.36
HMGB3-202ENST00000419110 EPB41P11171 864 aaKnown RBP6.56□□□□□ -1.36
HMGB3-202ENST00000419110 PRKCSHP14314 528 aaPredicted RBP6.56□□□□□ -1.36
HMGB3-202ENST00000419110 CYP2B6P20813 491 aa6.56□□□□□ -1.36
HMGB3-202ENST00000419110 NR2F2P24468 414 aa6.56□□□□□ -1.36
HMGB3-202ENST00000419110 RPL13P26373 211 aaKnown RBP6.56□□□□□ -1.36
HMGB3-202ENST00000419110 MARK3P27448 753 aa6.56□□□□□ -1.36
HMGB3-202ENST00000419110 ADCYAP1R1P41586 468 aa6.56□□□□□ -1.36
HMGB3-202ENST00000419110 STAT5BP51692 787 aa6.56□□□□□ -1.36
HMGB3-202ENST00000419110 NPEPPSP55786 919 aa6.56□□□□□ -1.36
HMGB3-202ENST00000419110 RTP1P59025 263 aa6.56□□□□□ -1.36
HMGB3-202ENST00000419110 LACTBP83111 547 aaPredicted RBP6.56□□□□□ -1.36
HMGB3-202ENST00000419110 SP2Q02086 613 aa6.56□□□□□ -1.36
HMGB3-202ENST00000419110 TBC1D8BQ0IIM8 1120 aa6.56□□□□□ -1.36
HMGB3-202ENST00000419110 MAPK7Q13164 816 aa6.56□□□□□ -1.36
HMGB3-202ENST00000419110 ACVR2BQ13705 512 aa6.56□□□□□ -1.36
HMGB3-202ENST00000419110 TRIM14Q14142 442 aa6.56□□□□□ -1.36
HMGB3-202ENST00000419110 KRT31Q15323 416 aa6.56□□□□□ -1.36
HMGB3-202ENST00000419110 LRRC41Q15345 812 aa6.56□□□□□ -1.36
HMGB3-202ENST00000419110 DUSP28Q4G0W2 176 aa6.56□□□□□ -1.36
HMGB3-202ENST00000419110 ZCWPW2Q504Y3 356 aa6.56□□□□□ -1.36
HMGB3-202ENST00000419110 TCP11X2Q5H9J9 407 aa6.56□□□□□ -1.36
HMGB3-202ENST00000419110 MFSD14CQ5VZR4 134 aa6.56□□□□□ -1.36
HMGB3-202ENST00000419110 CENPPQ6IPU0 288 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms