RNA–Protein interactions for RNA: ENST00000419007.5

SEMA3B-203, Transcript of semaphorin 3B, humanhuman

TSL 2

Gene SEMA3B, Length 3,283 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-203ENST00000419007 POLD1P28340 1107 aa16.47■□□□□ 0.23
SEMA3B-203ENST00000419007 CDC42EP5Q6NZY7 148 aa16.47■□□□□ 0.23
SEMA3B-203ENST00000419007 C1orf131Q8NDD1 294 aaKnown RBP16.47■□□□□ 0.23
SEMA3B-203ENST00000419007 SELENOSQ9BQE4 189 aa16.47■□□□□ 0.23
SEMA3B-203ENST00000419007 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.47■□□□□ 0.23
SEMA3B-203ENST00000419007 IGSF9BQ9UPX0 1349 aa16.46■□□□□ 0.23
SEMA3B-203ENST00000419007 RBM5P52756 815 aaKnown RBP eCLIP16.46■□□□□ 0.236e-6■□□□□ 9
SEMA3B-203ENST00000419007 ACTN3Q08043 901 aaPredicted RBP16.46■□□□□ 0.23
SEMA3B-203ENST00000419007 EPM2AIP1Q7L775 607 aaPredicted RBP16.46■□□□□ 0.23
SEMA3B-203ENST00000419007 CACNA2D3Q8IZS8 1091 aa16.46■□□□□ 0.23
SEMA3B-203ENST00000419007 ZC3H12CQ9C0D7 883 aaKnown RBP16.46■□□□□ 0.23
SEMA3B-203ENST00000419007 FAM114A2Q9NRY5 505 aa16.46■□□□□ 0.23
SEMA3B-203ENST00000419007 F8VZ95 297 aa16.46■□□□□ 0.23
SEMA3B-203ENST00000419007 SOX5P35711 763 aa16.46■□□□□ 0.23
SEMA3B-203ENST00000419007 JAM2P57087 298 aa16.46■□□□□ 0.23
SEMA3B-203ENST00000419007 DR1Q01658 176 aa16.46■□□□□ 0.23
SEMA3B-203ENST00000419007 SEC16BQ96JE7 1060 aa16.46■□□□□ 0.23
SEMA3B-203ENST00000419007 PSMD1Q99460 953 aa16.46■□□□□ 0.23
SEMA3B-203ENST00000419007 EIF2AK1Q9BQI3 630 aaKnown RBP16.46■□□□□ 0.23
SEMA3B-203ENST00000419007 VCPKMTQ9H867 229 aa16.46■□□□□ 0.23
SEMA3B-203ENST00000419007 CHORDC1Q9UHD1 332 aaPredicted RBP16.46■□□□□ 0.23
SEMA3B-203ENST00000419007 PNMA2Q9UL42 364 aa16.46■□□□□ 0.23
SEMA3B-203ENST00000419007 SNX24Q9Y343 169 aa16.46■□□□□ 0.23
SEMA3B-203ENST00000419007 EML1O00423 815 aa16.46■□□□□ 0.22
SEMA3B-203ENST00000419007 MSH4O15457 936 aa16.46■□□□□ 0.22
SEMA3B-203ENST00000419007 TNFAIP3P21580 790 aa16.46■□□□□ 0.22
SEMA3B-203ENST00000419007 AADACL2Q6P093 401 aa16.46■□□□□ 0.22
SEMA3B-203ENST00000419007 CCDC91Q7Z6B0 441 aa16.46■□□□□ 0.22
SEMA3B-203ENST00000419007 YTHDF3Q7Z739 585 aaKnown RBP16.46■□□□□ 0.22
SEMA3B-203ENST00000419007 SLFN11Q7Z7L1 901 aa16.46■□□□□ 0.22
SEMA3B-203ENST00000419007 EIF1ADQ8N9N8 165 aaKnown RBP16.46■□□□□ 0.22
SEMA3B-203ENST00000419007 HES6Q96HZ4 224 aa16.46■□□□□ 0.22
SEMA3B-203ENST00000419007 AMNQ9BXJ7 453 aa16.46■□□□□ 0.22
SEMA3B-203ENST00000419007 TAS2R14Q9NYV8 317 aa16.46■□□□□ 0.22
SEMA3B-203ENST00000419007 STXBP5LQ9Y2K9 1186 aa16.46■□□□□ 0.22
SEMA3B-203ENST00000419007 ATXN2Q99700 1313 aaKnown RBP16.45■□□□□ 0.22
SEMA3B-203ENST00000419007 GOLGA6L10A0A0M3HER8 536 aa16.45■□□□□ 0.22
SEMA3B-203ENST00000419007 BBOX1O75936 387 aa16.45■□□□□ 0.22
SEMA3B-203ENST00000419007 RDXP35241 583 aaKnown RBP16.45■□□□□ 0.22
SEMA3B-203ENST00000419007 PSMC2P35998 433 aaKnown RBP16.45■□□□□ 0.22
SEMA3B-203ENST00000419007 FBXO11Q86XK2 927 aa16.45■□□□□ 0.22
SEMA3B-203ENST00000419007 ARHGEF26Q96DR7 871 aa16.45■□□□□ 0.22
SEMA3B-203ENST00000419007 KLC4Q9NSK0 619 aa16.45■□□□□ 0.22
SEMA3B-203ENST00000419007 DAAM1Q9Y4D1 1078 aa16.45■□□□□ 0.22
SEMA3B-203ENST00000419007 CYP3A7-CYP3A51PA0A087WV96 503 aa16.45■□□□□ 0.22
SEMA3B-203ENST00000419007 TGFB1I1O43294 461 aa16.45■□□□□ 0.22
SEMA3B-203ENST00000419007 CAND2O75155 1236 aa16.45■□□□□ 0.22
SEMA3B-203ENST00000419007 GDF11O95390 407 aa16.45■□□□□ 0.22
SEMA3B-203ENST00000419007 CYP3A7P24462 503 aa16.45■□□□□ 0.22
SEMA3B-203ENST00000419007 SPRED3Q2MJR0 410 aa16.45■□□□□ 0.22
SEMA3B-203ENST00000419007 CERKLQ49MI3 558 aaPredicted RBP16.45■□□□□ 0.22
SEMA3B-203ENST00000419007 RASGEF1CQ8N431 466 aa16.45■□□□□ 0.22
SEMA3B-203ENST00000419007 RFFLQ8WZ73 363 aa16.45■□□□□ 0.22
SEMA3B-203ENST00000419007 CCDC113Q9H0I3 377 aa16.45■□□□□ 0.22
SEMA3B-203ENST00000419007 RAB17Q9H0T7 212 aa16.45■□□□□ 0.22
SEMA3B-203ENST00000419007 THAP2Q9H0W7 228 aa16.45■□□□□ 0.22
SEMA3B-203ENST00000419007 CTNND1O60716 968 aaKnown RBP16.44■□□□□ 0.22
SEMA3B-203ENST00000419007 SHBGP04278 402 aa16.44■□□□□ 0.22
SEMA3B-203ENST00000419007 LMNB1P20700 586 aa16.44■□□□□ 0.22
SEMA3B-203ENST00000419007 UBXN2AP68543 259 aa16.44■□□□□ 0.22
SEMA3B-203ENST00000419007 AP3B2Q13367 1082 aa16.44■□□□□ 0.22
SEMA3B-203ENST00000419007 GKAP1Q5VSY0 366 aaPredicted RBP16.44■□□□□ 0.22
SEMA3B-203ENST00000419007 PALB2Q86YC2 1186 aa16.44■□□□□ 0.22
SEMA3B-203ENST00000419007 SPICE1Q8N0Z3 855 aa16.44■□□□□ 0.22
SEMA3B-203ENST00000419007 ERVK-5Q9HDB9 667 aa16.44■□□□□ 0.22
SEMA3B-203ENST00000419007 ZBTB48P10074 688 aaPredicted RBP16.44■□□□□ 0.22
SEMA3B-203ENST00000419007 LLGL1Q15334 1064 aa16.44■□□□□ 0.22
SEMA3B-203ENST00000419007 DCAF12L1Q5VU92 463 aa16.44■□□□□ 0.22
SEMA3B-203ENST00000419007 RINT1Q6NUQ1 792 aa16.44■□□□□ 0.22
SEMA3B-203ENST00000419007 OSBPL7Q9BZF2 842 aa16.44■□□□□ 0.22
SEMA3B-203ENST00000419007 SLC40A1Q9NP59 571 aa16.44■□□□□ 0.22
SEMA3B-203ENST00000419007 PCDHAC2Q9Y5I4 1007 aa16.44■□□□□ 0.22
SEMA3B-203ENST00000419007 MYO3BQ8WXR4 1341 aa16.44■□□□□ 0.22
SEMA3B-203ENST00000419007 A0A0A6YYK5 440 aaPredicted RBP16.44■□□□□ 0.22
SEMA3B-203ENST00000419007 SLC16A3O15427 465 aaKnown RBP16.44■□□□□ 0.22
SEMA3B-203ENST00000419007 FMO5P49326 533 aa16.44■□□□□ 0.22
SEMA3B-203ENST00000419007 CBWD6Q4V339 395 aa16.44■□□□□ 0.22
SEMA3B-203ENST00000419007 CBWD3Q5JTY5 395 aa16.44■□□□□ 0.22
SEMA3B-203ENST00000419007 CBWD5Q5RIA9 395 aa16.44■□□□□ 0.22
SEMA3B-203ENST00000419007 SWT1Q5T5J6 900 aaKnown RBP16.44■□□□□ 0.22
SEMA3B-203ENST00000419007 AGBL2Q5U5Z8 902 aa16.44■□□□□ 0.22
SEMA3B-203ENST00000419007 MAEAQ7L5Y9 396 aa16.44■□□□□ 0.22
SEMA3B-203ENST00000419007 HS2ST1Q7LGA3 356 aa16.44■□□□□ 0.22
SEMA3B-203ENST00000419007 LENG9Q96B70 501 aa16.44■□□□□ 0.22
SEMA3B-203ENST00000419007 PAGR1Q9BTK6 254 aa16.44■□□□□ 0.22
SEMA3B-203ENST00000419007 ICA1Q05084 483 aa16.43■□□□□ 0.22
SEMA3B-203ENST00000419007 CHADLQ6NUI6 762 aa16.43■□□□□ 0.22
SEMA3B-203ENST00000419007 CEP57Q86XR8 500 aa16.43■□□□□ 0.22
SEMA3B-203ENST00000419007 TEKT1Q969V4 418 aa16.43■□□□□ 0.22
SEMA3B-203ENST00000419007 FRMD4BQ9Y2L6 1034 aa16.43■□□□□ 0.22
SEMA3B-203ENST00000419007 F5H6K3 240 aa16.43■□□□□ 0.22
SEMA3B-203ENST00000419007 DNM1LO00429 736 aa16.43■□□□□ 0.22
SEMA3B-203ENST00000419007 SLCO1A2P46721 670 aa16.43■□□□□ 0.22
SEMA3B-203ENST00000419007 KLRC3Q07444 240 aa16.43■□□□□ 0.22
SEMA3B-203ENST00000419007 C6orf89Q6UWU4 347 aa16.43■□□□□ 0.22
SEMA3B-203ENST00000419007 SYCP3Q8IZU3 236 aa16.43■□□□□ 0.22
SEMA3B-203ENST00000419007 DNAJC18Q9H819 358 aa16.43■□□□□ 0.22
SEMA3B-203ENST00000419007 HAUS2Q9NVX0 235 aa16.43■□□□□ 0.22
SEMA3B-203ENST00000419007 CTTNBP2NLQ9P2B4 639 aa16.43■□□□□ 0.22
SEMA3B-203ENST00000419007 ARFGEF1Q9Y6D6 1849 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms