RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 PRAMEF25A6NGN4 478 aa5.06□□□□□ -1.6
HMGB3P20-201ENST00000417997 FAM90A27PA6NNH2 459 aa5.06□□□□□ -1.6
HMGB3P20-201ENST00000417997 H0Y858 1186 aa5.06□□□□□ -1.6
HMGB3P20-201ENST00000417997 CCER2I3L3R5 266 aa5.06□□□□□ -1.6
HMGB3P20-201ENST00000417997 MAN2B1O00754 1011 aa5.06□□□□□ -1.6
HMGB3P20-201ENST00000417997 KNG1P01042 644 aa5.06□□□□□ -1.6
HMGB3P20-201ENST00000417997 COL6A1P12109 1028 aa5.06□□□□□ -1.6
HMGB3P20-201ENST00000417997 JAM2P57087 298 aa5.06□□□□□ -1.6
HMGB3P20-201ENST00000417997 PPP2CBP62714 309 aa5.06□□□□□ -1.6
HMGB3P20-201ENST00000417997 PPP2CAP67775 309 aa5.06□□□□□ -1.6
HMGB3P20-201ENST00000417997 ADAM17P78536 824 aa5.06□□□□□ -1.6
HMGB3P20-201ENST00000417997 ZXDCQ2QGD7 858 aaPredicted RBP5.06□□□□□ -1.6
HMGB3P20-201ENST00000417997 Q6ZUG5 572 aa5.06□□□□□ -1.6
HMGB3P20-201ENST00000417997 C16orf59Q7L2K0 433 aa5.06□□□□□ -1.6
HMGB3P20-201ENST00000417997 SAMD11Q96NU1 681 aa5.06□□□□□ -1.6
HMGB3P20-201ENST00000417997 KRTAP4-11Q9BYQ6 195 aa5.06□□□□□ -1.6
HMGB3P20-201ENST00000417997 PPP4R1LQ9P1A2 415 aa5.06□□□□□ -1.6
HMGB3P20-201ENST00000417997 KTN1Q86UP2 1357 aaKnown RBP5.05□□□□□ -1.6
HMGB3P20-201ENST00000417997 ESYT3A0FGR9 886 aa5.05□□□□□ -1.6
HMGB3P20-201ENST00000417997 ARVCFO00192 962 aa5.05□□□□□ -1.6
HMGB3P20-201ENST00000417997 KLHL18O94889 574 aa5.05□□□□□ -1.6
HMGB3P20-201ENST00000417997 AMY2AP04746 511 aa5.05□□□□□ -1.6
HMGB3P20-201ENST00000417997 CHGBP05060 677 aa5.05□□□□□ -1.6
HMGB3P20-201ENST00000417997 AMY2BP19961 511 aa5.05□□□□□ -1.6
HMGB3P20-201ENST00000417997 RBL2Q08999 1139 aa5.05□□□□□ -1.6
HMGB3P20-201ENST00000417997 DBPQ10586 325 aaPredicted RBP5.05□□□□□ -1.6
HMGB3P20-201ENST00000417997 CNGB1Q14028 1251 aaPredicted RBP5.05□□□□□ -1.6
HMGB3P20-201ENST00000417997 SF3A1Q15459 793 aaKnown RBP5.05□□□□□ -1.6
HMGB3P20-201ENST00000417997 FIGNQ5HY92 759 aa5.05□□□□□ -1.6
HMGB3P20-201ENST00000417997 SOGA3Q5TF21 947 aa5.05□□□□□ -1.6
HMGB3P20-201ENST00000417997 PKN3Q6P5Z2 889 aa5.05□□□□□ -1.6
HMGB3P20-201ENST00000417997 CIR1Q86X95 450 aaPredicted RBP5.05□□□□□ -1.6
HMGB3P20-201ENST00000417997 IFNL2Q8IZJ0 200 aa5.05□□□□□ -1.6
HMGB3P20-201ENST00000417997 MAGEB10Q96LZ2 347 aaPredicted RBP5.05□□□□□ -1.6
HMGB3P20-201ENST00000417997 TESK2Q96S53 571 aa5.05□□□□□ -1.6
HMGB3P20-201ENST00000417997 DNAJC2Q99543 621 aaKnown RBP5.05□□□□□ -1.6
HMGB3P20-201ENST00000417997 PTPN18Q99952 460 aa5.05□□□□□ -1.6
HMGB3P20-201ENST00000417997 SLC52A2Q9HAB3 445 aa5.05□□□□□ -1.6
HMGB3P20-201ENST00000417997 KCND1Q9NSA2 647 aa5.05□□□□□ -1.6
HMGB3P20-201ENST00000417997 ADAM29Q9UKF5 820 aa5.05□□□□□ -1.6
HMGB3P20-201ENST00000417997 JAG2Q9Y219 1238 aa5.05□□□□□ -1.6
HMGB3P20-201ENST00000417997 EID1Q9Y6B2 187 aa5.05□□□□□ -1.6
HMGB3P20-201ENST00000417997 XRN1Q8IZH2 1706 aaKnown RBP5.05□□□□□ -1.6
HMGB3P20-201ENST00000417997 ARHGAP23Q9P227 1491 aa5.05□□□□□ -1.6
HMGB3P20-201ENST00000417997 LRPPRCP42704 1394 aaKnown RBP5.04□□□□□ -1.6
HMGB3P20-201ENST00000417997 PLEKHG1Q9ULL1 1385 aa5.04□□□□□ -1.6
HMGB3P20-201ENST00000417997 ADGRB2O60241 1585 aa5.04□□□□□ -1.6
HMGB3P20-201ENST00000417997 EVC2Q86UK5 1308 aa5.04□□□□□ -1.6
HMGB3P20-201ENST00000417997 WNT9AO14904 365 aa5.04□□□□□ -1.6
HMGB3P20-201ENST00000417997 RASGRP1O95267 797 aa5.04□□□□□ -1.6
HMGB3P20-201ENST00000417997 IL18BPO95998 194 aa5.04□□□□□ -1.6
HMGB3P20-201ENST00000417997 ZNF20P17024 532 aa5.04□□□□□ -1.6
HMGB3P20-201ENST00000417997 LONRF2Q1L5Z9 754 aa5.04□□□□□ -1.6
HMGB3P20-201ENST00000417997 WDR72Q3MJ13 1102 aa5.04□□□□□ -1.6
HMGB3P20-201ENST00000417997 ZNF568Q3ZCX4 644 aa5.04□□□□□ -1.6
HMGB3P20-201ENST00000417997 ZC3H12BQ5HYM0 836 aaKnown RBP5.04□□□□□ -1.6
HMGB3P20-201ENST00000417997 LRP10Q7Z4F1 713 aa5.04□□□□□ -1.6
HMGB3P20-201ENST00000417997 ZSWIM2Q8NEG5 633 aa5.04□□□□□ -1.6
HMGB3P20-201ENST00000417997 WDR48Q8TAF3 677 aa5.04□□□□□ -1.6
HMGB3P20-201ENST00000417997 PDGFDQ9GZP0 370 aaPredicted RBP5.04□□□□□ -1.6
HMGB3P20-201ENST00000417997 DEF6Q9H4E7 631 aa5.04□□□□□ -1.6
HMGB3P20-201ENST00000417997 POGKQ9P215 609 aa5.04□□□□□ -1.6
HMGB3P20-201ENST00000417997 STK26Q9P289 416 aa5.04□□□□□ -1.6
HMGB3P20-201ENST00000417997 SFMBT1Q9UHJ3 866 aa5.04□□□□□ -1.6
HMGB3P20-201ENST00000417997 COQ6Q9Y2Z9 468 aa5.04□□□□□ -1.6
HMGB3P20-201ENST00000417997 AKAP12Q02952 1782 aa5.04□□□□□ -1.6
HMGB3P20-201ENST00000417997 TOPAZ1Q8N9V7 1692 aa5.03□□□□□ -1.6
HMGB3P20-201ENST00000417997 ZNF561-AS1K7EIQ3 104 aa5.03□□□□□ -1.6
HMGB3P20-201ENST00000417997 EFCAB14O75071 495 aa5.03□□□□□ -1.6
HMGB3P20-201ENST00000417997 GJA4P35212 333 aa5.03□□□□□ -1.6
HMGB3P20-201ENST00000417997 EPHB4P54760 987 aa5.03□□□□□ -1.6
HMGB3P20-201ENST00000417997 ICAM4Q14773 271 aa5.03□□□□□ -1.6
HMGB3P20-201ENST00000417997 CPZQ66K79 652 aa5.03□□□□□ -1.6
HMGB3P20-201ENST00000417997 DPP8Q6V1X1 898 aaPredicted RBP5.03□□□□□ -1.6
HMGB3P20-201ENST00000417997 TTC9BQ8N6N2 239 aa5.03□□□□□ -1.6
HMGB3P20-201ENST00000417997 KISS1RQ969F8 398 aaPredicted RBP5.03□□□□□ -1.6
HMGB3P20-201ENST00000417997 LRRC37BQ96QE4 947 aa5.03□□□□□ -1.6
HMGB3P20-201ENST00000417997 PRKRIP1Q9H875 184 aaPredicted RBP5.03□□□□□ -1.6
HMGB3P20-201ENST00000417997 PTPN22Q9Y2R2 807 aa5.03□□□□□ -1.6
HMGB3P20-201ENST00000417997 SETD1BQ9UPS6 1966 aaKnown RBP5.03□□□□□ -1.6
HMGB3P20-201ENST00000417997 MON2Q7Z3U7 1717 aa5.03□□□□□ -1.6
HMGB3P20-201ENST00000417997 CHD2O14647 1828 aaKnown RBP5.02□□□□□ -1.61
HMGB3P20-201ENST00000417997 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.02□□□□□ -1.61
HMGB3P20-201ENST00000417997 SCDO00767 359 aa5.02□□□□□ -1.61
HMGB3P20-201ENST00000417997 GPR42O15529 346 aa5.02□□□□□ -1.61
HMGB3P20-201ENST00000417997 PTGS1P23219 599 aa5.02□□□□□ -1.61
HMGB3P20-201ENST00000417997 CSF2RBP32927 897 aa5.02□□□□□ -1.61
HMGB3P20-201ENST00000417997 ADCY8P40145 1251 aa5.02□□□□□ -1.61
HMGB3P20-201ENST00000417997 RRADP55042 308 aa5.02□□□□□ -1.61
HMGB3P20-201ENST00000417997 SAFB2Q14151 953 aaKnown RBP eCLIP5.02□□□□□ -1.61
HMGB3P20-201ENST00000417997 USP10Q14694 798 aaKnown RBP5.02□□□□□ -1.61
HMGB3P20-201ENST00000417997 SLFN13Q68D06 897 aa5.02□□□□□ -1.61
HMGB3P20-201ENST00000417997 THEMISQ8N1K5 641 aaPredicted RBP5.02□□□□□ -1.61
HMGB3P20-201ENST00000417997 SLC7A14Q8TBB6 771 aa5.02□□□□□ -1.61
HMGB3P20-201ENST00000417997 DVL3Q92997 716 aaPredicted RBP5.02□□□□□ -1.61
HMGB3P20-201ENST00000417997 GNRHR2Q96P88 292 aa5.02□□□□□ -1.61
HMGB3P20-201ENST00000417997 LMF1Q96S06 567 aa5.02□□□□□ -1.61
HMGB3P20-201ENST00000417997 SSBP3Q9BWW4 388 aaPredicted RBP5.02□□□□□ -1.61
HMGB3P20-201ENST00000417997 PANK3Q9H999 370 aa5.02□□□□□ -1.61
HMGB3P20-201ENST00000417997 SMURF1Q9HCE7 757 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms