RNA–Protein interactions for RNA: ENST00000416982.1

LINC01287-201, Transcript of long intergenic non-protein coding RNA 1287, humanhuman

TSL 2 BASIC

Gene LINC01287, Length 2,624 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01287-201ENST00000416982 BNIP1Q12981 228 aa11.05□□□□□ -0.64
LINC01287-201ENST00000416982 PFKFB3Q16875 520 aaPredicted RBP11.05□□□□□ -0.64
LINC01287-201ENST00000416982 DACT2Q5SW24 774 aa11.05□□□□□ -0.64
LINC01287-201ENST00000416982 HOOK3Q86VS8 718 aa11.05□□□□□ -0.64
LINC01287-201ENST00000416982 TSC22D3Q99576 134 aa11.05□□□□□ -0.64
LINC01287-201ENST00000416982 NUCKS1Q9H1E3 243 aaKnown RBP11.05□□□□□ -0.64
LINC01287-201ENST00000416982 SERPINB13Q9UIV8 391 aa11.05□□□□□ -0.64
LINC01287-201ENST00000416982 KCNK3O14649 394 aa11.05□□□□□ -0.64
LINC01287-201ENST00000416982 SNX3O60493 162 aa11.05□□□□□ -0.64
LINC01287-201ENST00000416982 NPTXRO95502 500 aa11.05□□□□□ -0.64
LINC01287-201ENST00000416982 FCER1AP12319 257 aa11.05□□□□□ -0.64
LINC01287-201ENST00000416982 USP11P51784 963 aa11.05□□□□□ -0.64
LINC01287-201ENST00000416982 PDE4DQ08499 809 aa11.05□□□□□ -0.64
LINC01287-201ENST00000416982 RPS6KA1Q15418 735 aa11.05□□□□□ -0.64
LINC01287-201ENST00000416982 TAF11Q15544 211 aa11.05□□□□□ -0.64
LINC01287-201ENST00000416982 CMPK2Q5EBM0 449 aa11.05□□□□□ -0.64
LINC01287-201ENST00000416982 CENPPQ6IPU0 288 aa11.05□□□□□ -0.64
LINC01287-201ENST00000416982 ANO7Q6IWH7 933 aa11.05□□□□□ -0.64
LINC01287-201ENST00000416982 ASRGL1Q7L266 308 aa11.05□□□□□ -0.64
LINC01287-201ENST00000416982 APLFQ8IW19 511 aaPredicted RBP11.05□□□□□ -0.64
LINC01287-201ENST00000416982 PROCA1Q8NCQ7 364 aaPredicted RBP11.05□□□□□ -0.64
LINC01287-201ENST00000416982 NEDD1Q8NHV4 660 aa11.05□□□□□ -0.64
LINC01287-201ENST00000416982 TAF4BQ92750 862 aa11.05□□□□□ -0.64
LINC01287-201ENST00000416982 SYN2Q92777 582 aaPredicted RBP11.05□□□□□ -0.64
LINC01287-201ENST00000416982 PGM2Q96G03 612 aa11.05□□□□□ -0.64
LINC01287-201ENST00000416982 DDX47Q9H0S4 455 aaKnown RBP11.05□□□□□ -0.64
LINC01287-201ENST00000416982 GPCPD1Q9NPB8 672 aa11.05□□□□□ -0.64
LINC01287-201ENST00000416982 ASB3Q9Y575 518 aa11.05□□□□□ -0.64
LINC01287-201ENST00000416982 CCDC88AQ3V6T2 1871 aa11.04□□□□□ -0.64
LINC01287-201ENST00000416982 BTNL10A8MVZ5 291 aa11.04□□□□□ -0.64
LINC01287-201ENST00000416982 MAP3K13O43283 966 aa11.04□□□□□ -0.64
LINC01287-201ENST00000416982 SERPING1P05155 500 aa11.04□□□□□ -0.64
LINC01287-201ENST00000416982 NUDT17P0C025 328 aa11.04□□□□□ -0.64
LINC01287-201ENST00000416982 DPEP1P16444 411 aa11.04□□□□□ -0.64
LINC01287-201ENST00000416982 SLC16A2P36021 539 aa11.04□□□□□ -0.64
LINC01287-201ENST00000416982 MSH2P43246 934 aa11.04□□□□□ -0.64
LINC01287-201ENST00000416982 SF3A3Q12874 501 aaKnown RBP eCLIP11.04□□□□□ -0.64
LINC01287-201ENST00000416982 PLS1Q14651 629 aa11.04□□□□□ -0.64
LINC01287-201ENST00000416982 SLC9C1Q4G0N8 1177 aa11.04□□□□□ -0.64
LINC01287-201ENST00000416982 TDRD12Q587J7 1177 aaKnown RBP11.04□□□□□ -0.64
LINC01287-201ENST00000416982 MTHFD1LQ6UB35 978 aa11.04□□□□□ -0.64
LINC01287-201ENST00000416982 GALNT15Q8N3T1 639 aa11.04□□□□□ -0.64
LINC01287-201ENST00000416982 KIAA0895Q8NCT3 520 aa11.04□□□□□ -0.64
LINC01287-201ENST00000416982 ATP8B4Q8TF62 1192 aa11.04□□□□□ -0.64
LINC01287-201ENST00000416982 ANKS1AQ92625 1134 aa11.04□□□□□ -0.64
LINC01287-201ENST00000416982 PRMT6Q96LA8 375 aaPredicted RBP11.04□□□□□ -0.64
LINC01287-201ENST00000416982 TRIM9Q9C026 710 aa11.04□□□□□ -0.64
LINC01287-201ENST00000416982 RAB17Q9H0T7 212 aa11.04□□□□□ -0.64
LINC01287-201ENST00000416982 MAGEF1Q9HAY2 307 aa11.04□□□□□ -0.64
LINC01287-201ENST00000416982 LUC7LQ9NQ29 371 aaKnown RBP11.04□□□□□ -0.64
LINC01287-201ENST00000416982 SLX4Q8IY92 1834 aa11.04□□□□□ -0.64
LINC01287-201ENST00000416982 GOLGA6L10A0A0M3HER8 536 aa11.04□□□□□ -0.64
LINC01287-201ENST00000416982 SPDYE3A6NKU9 549 aa11.04□□□□□ -0.64
LINC01287-201ENST00000416982 CCDC188H7C350 402 aa11.04□□□□□ -0.64
LINC01287-201ENST00000416982 PGRMC1O00264 195 aaKnown RBP11.04□□□□□ -0.64
LINC01287-201ENST00000416982 COPS2P61201 443 aa11.04□□□□□ -0.64
LINC01287-201ENST00000416982 KCNMA1Q12791 1236 aa11.04□□□□□ -0.64
LINC01287-201ENST00000416982 SLC18A3Q16572 532 aa11.04□□□□□ -0.64
LINC01287-201ENST00000416982 CCDC178Q5BJE1 867 aa11.04□□□□□ -0.64
LINC01287-201ENST00000416982 TTBK2Q6IQ55 1244 aa11.04□□□□□ -0.64
LINC01287-201ENST00000416982 PIGSQ96S52 555 aa11.04□□□□□ -0.64
LINC01287-201ENST00000416982 C7orf25Q9BPX7 421 aa11.04□□□□□ -0.64
LINC01287-201ENST00000416982 SELENOSQ9BQE4 189 aa11.04□□□□□ -0.64
LINC01287-201ENST00000416982 AP1M1Q9BXS5 423 aa11.04□□□□□ -0.64
LINC01287-201ENST00000416982 PACSIN1Q9BY11 444 aa11.04□□□□□ -0.64
LINC01287-201ENST00000416982 NSRP1Q9H0G5 558 aaKnown RBP11.04□□□□□ -0.64
LINC01287-201ENST00000416982 CUEDC2Q9H467 287 aa11.04□□□□□ -0.64
LINC01287-201ENST00000416982 SLITRK6Q9H5Y7 841 aa11.04□□□□□ -0.64
LINC01287-201ENST00000416982 DNAJC18Q9H819 358 aa11.04□□□□□ -0.64
LINC01287-201ENST00000416982 NOC2LQ9Y3T9 749 aaKnown RBP11.04□□□□□ -0.64
LINC01287-201ENST00000416982 LRRC42Q9Y546 428 aa11.04□□□□□ -0.64
LINC01287-201ENST00000416982 CLRN2A0PK11 232 aa11.03□□□□□ -0.64
LINC01287-201ENST00000416982 CEP104O60308 925 aa11.03□□□□□ -0.64
LINC01287-201ENST00000416982 SHBGP04278 402 aa11.03□□□□□ -0.64
LINC01287-201ENST00000416982 GNAZP19086 355 aa11.03□□□□□ -0.64
LINC01287-201ENST00000416982 SHMT1P34896 483 aa11.03□□□□□ -0.64
LINC01287-201ENST00000416982 TUBP50607 506 aa11.03□□□□□ -0.64
LINC01287-201ENST00000416982 GABPAQ06546 454 aa11.03□□□□□ -0.64
LINC01287-201ENST00000416982 GRM4Q14833 912 aa11.03□□□□□ -0.64
LINC01287-201ENST00000416982 SGSM1Q2NKQ1 1148 aa11.03□□□□□ -0.64
LINC01287-201ENST00000416982 CCDC38Q502W7 563 aa11.03□□□□□ -0.64
LINC01287-201ENST00000416982 STYK1Q6J9G0 422 aa11.03□□□□□ -0.64
LINC01287-201ENST00000416982 SH3BP5LQ7L8J4 393 aa11.03□□□□□ -0.64
LINC01287-201ENST00000416982 KIF2BQ8N4N8 673 aa11.03□□□□□ -0.64
LINC01287-201ENST00000416982 KLHL29Q96CT2 875 aa11.03□□□□□ -0.64
LINC01287-201ENST00000416982 UIMC1Q96RL1 719 aa11.03□□□□□ -0.64
LINC01287-201ENST00000416982 PLIN2Q99541 437 aa11.03□□□□□ -0.64
LINC01287-201ENST00000416982 PRMT1Q99873 361 aaKnown RBP11.03□□□□□ -0.64
LINC01287-201ENST00000416982 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.03□□□□□ -0.64
LINC01287-201ENST00000416982 ZNF287Q9HBT7 754 aa11.03□□□□□ -0.64
LINC01287-201ENST00000416982 FAM114A2Q9NRY5 505 aa11.03□□□□□ -0.64
LINC01287-201ENST00000416982 WDR70Q9NW82 654 aa11.03□□□□□ -0.64
LINC01287-201ENST00000416982 MTMR4Q9NYA4 1195 aa11.03□□□□□ -0.64
LINC01287-201ENST00000416982 CEP72Q9P209 647 aa11.03□□□□□ -0.64
LINC01287-201ENST00000416982 SNED1Q8TER0 1413 aa11.03□□□□□ -0.64
LINC01287-201ENST00000416982 ATAD5Q96QE3 1844 aa11.03□□□□□ -0.64
LINC01287-201ENST00000416982 PALM3A6NDB9 673 aaPredicted RBP11.03□□□□□ -0.64
LINC01287-201ENST00000416982 SPDYE5A6NIY4 337 aa11.03□□□□□ -0.64
LINC01287-201ENST00000416982 TPD52L2O43399 206 aaKnown RBP11.03□□□□□ -0.64
LINC01287-201ENST00000416982 FLOT1O75955 427 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms