RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 MAP7D2Q96T17 732 aa17■□□□□ 0.31
UBXN4-203ENST00000416538 NIFKQ9BYG3 293 aaKnown RBP17■□□□□ 0.31
UBXN4-203ENST00000416538 NSUN3Q9H649 340 aaKnown RBP17■□□□□ 0.31
UBXN4-203ENST00000416538 CD320Q9NPF0 282 aa17■□□□□ 0.31
UBXN4-203ENST00000416538 IGKV6-21A0A0C4DH24 114 aa16.99■□□□□ 0.31
UBXN4-203ENST00000416538 H3BQ06 376 aaPredicted RBP16.99■□□□□ 0.31
UBXN4-203ENST00000416538 CSDE1O75534 798 aaKnown RBP16.99■□□□□ 0.31
UBXN4-203ENST00000416538 STAG3L1P0CL83 205 aa16.99■□□□□ 0.31
UBXN4-203ENST00000416538 IL9P15248 144 aa16.99■□□□□ 0.31
UBXN4-203ENST00000416538 IRS1P35568 1242 aa16.99■□□□□ 0.31
UBXN4-203ENST00000416538 TBC1D8BQ0IIM8 1120 aa16.99■□□□□ 0.31
UBXN4-203ENST00000416538 ANKRD1Q15327 319 aa16.99■□□□□ 0.31
UBXN4-203ENST00000416538 LEXMQ3ZCV2 418 aa16.99■□□□□ 0.31
UBXN4-203ENST00000416538 PPP4R3AQ6IN85 833 aa16.99■□□□□ 0.31
UBXN4-203ENST00000416538 ZNF579Q8NAF0 562 aaKnown RBP16.99■□□□□ 0.31
UBXN4-203ENST00000416538 NEK9Q8TD19 979 aa16.99■□□□□ 0.31
UBXN4-203ENST00000416538 PLAGL2Q9UPG8 496 aa16.99■□□□□ 0.31
UBXN4-203ENST00000416538 RWDD3Q9Y3V2 267 aa16.99■□□□□ 0.31
UBXN4-203ENST00000416538 PCDHGC5Q9Y5F6 944 aa16.99■□□□□ 0.31
UBXN4-203ENST00000416538 DENND3A2RUS2 1198 aa16.98■□□□□ 0.31
UBXN4-203ENST00000416538 GPR182O15218 404 aa16.98■□□□□ 0.31
UBXN4-203ENST00000416538 CCNT1O60563 726 aaKnown RBP16.98■□□□□ 0.31
UBXN4-203ENST00000416538 DARSP14868 501 aaKnown RBP16.98■□□□□ 0.31
UBXN4-203ENST00000416538 ATF7P17544 494 aaPredicted RBP16.98■□□□□ 0.31
UBXN4-203ENST00000416538 LTBRP36941 435 aa16.98■□□□□ 0.31
UBXN4-203ENST00000416538 NEK4P51957 841 aa16.98■□□□□ 0.31
UBXN4-203ENST00000416538 FAM189BP81408 668 aa16.98■□□□□ 0.31
UBXN4-203ENST00000416538 DLX2Q07687 328 aaPredicted RBP16.98■□□□□ 0.31
UBXN4-203ENST00000416538 HYAL1Q12794 435 aa16.98■□□□□ 0.31
UBXN4-203ENST00000416538 XKR3Q5GH77 459 aa16.98■□□□□ 0.31
UBXN4-203ENST00000416538 SLC24A5Q71RS6 500 aa16.98■□□□□ 0.31
UBXN4-203ENST00000416538 ADGRD2Q7Z7M1 963 aa16.98■□□□□ 0.31
UBXN4-203ENST00000416538 KLHL23Q8NBE8 558 aa16.98■□□□□ 0.31
UBXN4-203ENST00000416538 SPPL3Q8TCT6 385 aa16.98■□□□□ 0.31
UBXN4-203ENST00000416538 C1orf112Q9NSG2 853 aa16.98■□□□□ 0.31
UBXN4-203ENST00000416538 NRBP2Q9NSY0 501 aa16.98■□□□□ 0.31
UBXN4-203ENST00000416538 LRFN2Q9ULH4 789 aa16.98■□□□□ 0.31
UBXN4-203ENST00000416538 LINC01565O15544 149 aa16.97■□□□□ 0.31
UBXN4-203ENST00000416538 TBX10O75333 385 aa16.97■□□□□ 0.31
UBXN4-203ENST00000416538 GCFC2P16383 781 aaKnown RBP16.97■□□□□ 0.31
UBXN4-203ENST00000416538 EIF4BP23588 611 aaKnown RBP16.97■□□□□ 0.31
UBXN4-203ENST00000416538 KRT2P35908 639 aa16.97■□□□□ 0.31
UBXN4-203ENST00000416538 NPEPPSP55786 919 aa16.97■□□□□ 0.31
UBXN4-203ENST00000416538 C8orf34Q49A92 452 aa16.97■□□□□ 0.31
UBXN4-203ENST00000416538 P2RX5Q93086 422 aa16.97■□□□□ 0.31
UBXN4-203ENST00000416538 PABPC5Q96DU9 382 aaKnown RBP16.97■□□□□ 0.31
UBXN4-203ENST00000416538 KIF2CQ99661 725 aa16.97■□□□□ 0.31
UBXN4-203ENST00000416538 PLVAPQ9BX97 442 aa16.97■□□□□ 0.31
UBXN4-203ENST00000416538 LMAN2LQ9H0V9 348 aa16.97■□□□□ 0.31
UBXN4-203ENST00000416538 PCDHB7Q9Y5E2 793 aa16.97■□□□□ 0.31
UBXN4-203ENST00000416538 C5orf42Q9H799 3197 aa16.96■□□□□ 0.31
UBXN4-203ENST00000416538 TBKBP1A7MCY6 615 aa16.96■□□□□ 0.31
UBXN4-203ENST00000416538 PSMC5P62195 406 aa16.96■□□□□ 0.31
UBXN4-203ENST00000416538 CTC1Q2NKJ3 1217 aa16.96■□□□□ 0.31
UBXN4-203ENST00000416538 CLLU1OSQ5K130 101 aa16.96■□□□□ 0.31
UBXN4-203ENST00000416538 LRRC55Q6ZSA7 311 aa16.96■□□□□ 0.31
UBXN4-203ENST00000416538 KSR1Q8IVT5 923 aa16.96■□□□□ 0.31
UBXN4-203ENST00000416538 FAM20AQ96MK3 541 aa16.96■□□□□ 0.31
UBXN4-203ENST00000416538 CWH43Q9H720 699 aa16.96■□□□□ 0.31
UBXN4-203ENST00000416538 TMEM161AQ9NX61 479 aa16.96■□□□□ 0.31
UBXN4-203ENST00000416538 RGL1Q9NZL6 768 aa16.96■□□□□ 0.31
UBXN4-203ENST00000416538 A0A087WZ62 844 aa16.95■□□□□ 0.3
UBXN4-203ENST00000416538 DDX11L8A8MPP1 907 aa16.95■□□□□ 0.3
UBXN4-203ENST00000416538 BTBD18B2RXH4 712 aa16.95■□□□□ 0.3
UBXN4-203ENST00000416538 ZBTB39O15060 712 aa16.95■□□□□ 0.3
UBXN4-203ENST00000416538 TBX3O15119 743 aa16.95■□□□□ 0.3
UBXN4-203ENST00000416538 MAFO75444 373 aaPredicted RBP16.95■□□□□ 0.3
UBXN4-203ENST00000416538 XBP1P17861 261 aa16.95■□□□□ 0.3
UBXN4-203ENST00000416538 TMOD1P28289 359 aa16.95■□□□□ 0.3
UBXN4-203ENST00000416538 ZNF598Q86UK7 904 aaKnown RBP16.95■□□□□ 0.3
UBXN4-203ENST00000416538 ECHDC2Q86YB7 292 aa16.95■□□□□ 0.3
UBXN4-203ENST00000416538 DIS3L2Q8IYB7 885 aaKnown RBP16.95■□□□□ 0.3
UBXN4-203ENST00000416538 POF1BQ8WVV4 589 aa16.95■□□□□ 0.3
UBXN4-203ENST00000416538 NLRP7Q8WX94 980 aa16.95■□□□□ 0.3
UBXN4-203ENST00000416538 WASF1Q92558 559 aa16.95■□□□□ 0.3
UBXN4-203ENST00000416538 FDXACB1Q9BRP7 624 aaPredicted RBP16.95■□□□□ 0.3
UBXN4-203ENST00000416538 LXNQ9BS40 222 aa16.95■□□□□ 0.3
UBXN4-203ENST00000416538 ELAC1Q9H777 363 aaKnown RBP16.95■□□□□ 0.3
UBXN4-203ENST00000416538 CYP26B1Q9NR63 512 aa16.95■□□□□ 0.3
UBXN4-203ENST00000416538 BMP2KQ9NSY1 1161 aaPredicted RBP16.95■□□□□ 0.3
UBXN4-203ENST00000416538 CLDND1Q9NY35 253 aa16.95■□□□□ 0.3
UBXN4-203ENST00000416538 PBX3P40426 434 aa16.94■□□□□ 0.3
UBXN4-203ENST00000416538 QARSP47897 775 aaKnown RBP16.94■□□□□ 0.3
UBXN4-203ENST00000416538 ODR4Q5SWX8 454 aa16.94■□□□□ 0.3
UBXN4-203ENST00000416538 NCAPH2Q6IBW4 605 aa16.94■□□□□ 0.3
UBXN4-203ENST00000416538 PTCRAQ6ISU1 281 aaPredicted RBP16.94■□□□□ 0.3
UBXN4-203ENST00000416538 COLGALT1Q8NBJ5 622 aa16.94■□□□□ 0.3
UBXN4-203ENST00000416538 DYDC2Q96IM9 177 aa16.94■□□□□ 0.3
UBXN4-203ENST00000416538 SCLT1Q96NL6 688 aa16.94■□□□□ 0.3
UBXN4-203ENST00000416538 CASD1Q96PB1 797 aa16.94■□□□□ 0.3
UBXN4-203ENST00000416538 ATP6V0A4Q9HBG4 840 aa16.94■□□□□ 0.3
UBXN4-203ENST00000416538 TYW1Q9NV66 732 aaKnown RBP16.94■□□□□ 0.3
UBXN4-203ENST00000416538 GRXCR2A6NFK2 248 aa16.93■□□□□ 0.3
UBXN4-203ENST00000416538 GLP2RO95838 553 aa16.93■□□□□ 0.3
UBXN4-203ENST00000416538 GUCY1B3Q02153 619 aa16.93■□□□□ 0.3
UBXN4-203ENST00000416538 CYP4A11Q02928 519 aa16.93■□□□□ 0.3
UBXN4-203ENST00000416538 CTTNQ14247 550 aaKnown RBP16.93■□□□□ 0.3
UBXN4-203ENST00000416538 EPHA7Q15375 998 aa16.93■□□□□ 0.3
UBXN4-203ENST00000416538 CLUL1Q15846 466 aa16.93■□□□□ 0.3
UBXN4-203ENST00000416538 EP400NLQ6ZTU2 488 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms