RNA–Protein interactions for RNA: ENST00000415541.5

SIK3-203, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 3,816 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-203ENST00000415541 TTC26A0AVF1 554 aa8.45□□□□□ -1.06
SIK3-203ENST00000415541 FAM205CA6NFA0 338 aa8.45□□□□□ -1.06
SIK3-203ENST00000415541 LRRC10BA6NIK2 292 aa8.45□□□□□ -1.06
SIK3-203ENST00000415541 PRPF3O43395 683 aaKnown RBP8.45□□□□□ -1.06
SIK3-203ENST00000415541 UPP2O95045 317 aa8.45□□□□□ -1.06
SIK3-203ENST00000415541 NFIAQ12857 509 aa8.45□□□□□ -1.06
SIK3-203ENST00000415541 PTPAQ15257 358 aa8.45□□□□□ -1.06
SIK3-203ENST00000415541 SFMBT2Q5VUG0 894 aa8.45□□□□□ -1.06
SIK3-203ENST00000415541 CDC42EP5Q6NZY7 148 aa8.45□□□□□ -1.06
SIK3-203ENST00000415541 PIGWQ7Z7B1 504 aa8.45□□□□□ -1.06
SIK3-203ENST00000415541 GRAMD1CQ8IYS0 662 aa8.45□□□□□ -1.06
SIK3-203ENST00000415541 NOX5Q96PH1 765 aa8.45□□□□□ -1.06
SIK3-203ENST00000415541 IFIH1Q9BYX4 1025 aaKnown RBP8.45□□□□□ -1.06
SIK3-203ENST00000415541 TMOD4Q9NZQ9 345 aa8.45□□□□□ -1.06
SIK3-203ENST00000415541 COMMD3-BMI1R4GMX3 469 aa8.45□□□□□ -1.06
SIK3-203ENST00000415541 A0A1W2PQC6 194 aa8.44□□□□□ -1.06
SIK3-203ENST00000415541 GLI1P08151 1106 aa8.44□□□□□ -1.06
SIK3-203ENST00000415541 TROVE2P10155 538 aaKnown RBP eCLIP8.44□□□□□ -1.06
SIK3-203ENST00000415541 EIF4BP23588 611 aaKnown RBP8.44□□□□□ -1.06
SIK3-203ENST00000415541 RPL13P26373 211 aaKnown RBP8.44□□□□□ -1.06
SIK3-203ENST00000415541 PPARDQ03181 441 aa8.44□□□□□ -1.06
SIK3-203ENST00000415541 TBC1D10BQ4KMP7 808 aaPredicted RBP8.44□□□□□ -1.06
SIK3-203ENST00000415541 CIAPIN1Q6FI81 312 aa8.44□□□□□ -1.06
SIK3-203ENST00000415541 CCDC65Q8IXS2 484 aa8.44□□□□□ -1.06
SIK3-203ENST00000415541 RBBP8NLQ8NC74 664 aaPredicted RBP8.44□□□□□ -1.06
SIK3-203ENST00000415541 STK32AQ8WU08 396 aa8.44□□□□□ -1.06
SIK3-203ENST00000415541 CCDC17Q96LX7 622 aa8.44□□□□□ -1.06
SIK3-203ENST00000415541 OLFM3Q96PB7 478 aa8.44□□□□□ -1.06
SIK3-203ENST00000415541 KRT12Q99456 494 aa8.44□□□□□ -1.06
SIK3-203ENST00000415541 CCDC28BQ9BUN5 200 aa8.44□□□□□ -1.06
SIK3-203ENST00000415541 CSRNP2Q9H175 543 aa8.44□□□□□ -1.06
SIK3-203ENST00000415541 FOXP1Q9H334 677 aaPredicted RBP8.44□□□□□ -1.06
SIK3-203ENST00000415541 USP15Q9Y4E8 981 aaPredicted RBP8.44□□□□□ -1.06
SIK3-203ENST00000415541 PCDHA1Q9Y5I3 950 aa8.44□□□□□ -1.06
SIK3-203ENST00000415541 WDR19Q8NEZ3 1342 aa8.44□□□□□ -1.06
SIK3-203ENST00000415541 TJP1Q07157 1748 aa8.44□□□□□ -1.06
SIK3-203ENST00000415541 ESYT3A0FGR9 886 aa8.44□□□□□ -1.06
SIK3-203ENST00000415541 PALM3A6NDB9 673 aaPredicted RBP8.44□□□□□ -1.06
SIK3-203ENST00000415541 NVLO15381 856 aaKnown RBP8.44□□□□□ -1.06
SIK3-203ENST00000415541 SLURP2P0DP57 97 aa8.44□□□□□ -1.06
SIK3-203ENST00000415541 KCNA3P22001 575 aa8.44□□□□□ -1.06
SIK3-203ENST00000415541 MAGEA10P43363 369 aaPredicted RBP8.44□□□□□ -1.06
SIK3-203ENST00000415541 ZNF844Q08AG5 666 aa8.44□□□□□ -1.06
SIK3-203ENST00000415541 PABPC1LQ4VXU2 614 aaKnown RBP8.44□□□□□ -1.06
SIK3-203ENST00000415541 KRT79Q5XKE5 535 aa8.44□□□□□ -1.06
SIK3-203ENST00000415541 NFRKBQ6P4R8 1299 aa8.44□□□□□ -1.06
SIK3-203ENST00000415541 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.44□□□□□ -1.062e-7■■■■■ 278.5
SIK3-203ENST00000415541 ZNF579Q8NAF0 562 aaKnown RBP8.44□□□□□ -1.06
SIK3-203ENST00000415541 PSMB7Q99436 277 aa8.44□□□□□ -1.06
SIK3-203ENST00000415541 ISCUQ9H1K1 167 aa8.44□□□□□ -1.06
SIK3-203ENST00000415541 ZNF408Q9H9D4 720 aa8.44□□□□□ -1.06
SIK3-203ENST00000415541 ARHGEF3Q9NR81 526 aa8.44□□□□□ -1.06
SIK3-203ENST00000415541 UTP6Q9NYH9 597 aaKnown RBP8.44□□□□□ -1.06
SIK3-203ENST00000415541 KRT16P08779 473 aa8.44□□□□□ -1.06
SIK3-203ENST00000415541 RASSF2P50749 326 aa8.44□□□□□ -1.06
SIK3-203ENST00000415541 CACNA2D1P54289 1103 aa8.44□□□□□ -1.06
SIK3-203ENST00000415541 PAK1Q13153 545 aa8.44□□□□□ -1.06
SIK3-203ENST00000415541 KPNB1Q14974 876 aaKnown RBP8.44□□□□□ -1.06
SIK3-203ENST00000415541 SLC44A4Q53GD3 710 aa8.44□□□□□ -1.06
SIK3-203ENST00000415541 TCP11X2Q5H9J9 407 aa8.44□□□□□ -1.06
SIK3-203ENST00000415541 KRT25Q7Z3Z0 450 aa8.44□□□□□ -1.06
SIK3-203ENST00000415541 AGGF1Q8N302 714 aaeCLIP8.44□□□□□ -1.06
SIK3-203ENST00000415541 PIGOQ8TEQ8 1089 aa8.44□□□□□ -1.06
SIK3-203ENST00000415541 CASKIN2Q8WXE0 1202 aa8.44□□□□□ -1.06
SIK3-203ENST00000415541 PTPRN2Q92932 1015 aa8.44□□□□□ -1.06
SIK3-203ENST00000415541 FAM81BQ96LP2 452 aa8.44□□□□□ -1.06
SIK3-203ENST00000415541 PURBQ96QR8 312 aaKnown RBP8.44□□□□□ -1.06
SIK3-203ENST00000415541 NUDCD1Q96RS6 583 aa8.44□□□□□ -1.06
SIK3-203ENST00000415541 PDGFDQ9GZP0 370 aaPredicted RBP8.44□□□□□ -1.06
SIK3-203ENST00000415541 LACRTQ9GZZ8 138 aa8.44□□□□□ -1.06
SIK3-203ENST00000415541 THAP9Q9H5L6 903 aa8.44□□□□□ -1.06
SIK3-203ENST00000415541 PSTPIP2Q9H939 334 aa8.44□□□□□ -1.06
SIK3-203ENST00000415541 RWDD2AQ9UIY3 292 aa8.44□□□□□ -1.06
SIK3-203ENST00000415541 INTUQ9ULD6 942 aa8.44□□□□□ -1.06
SIK3-203ENST00000415541 AKR1B10O60218 316 aa8.43□□□□□ -1.06
SIK3-203ENST00000415541 RARAP10276 462 aa8.43□□□□□ -1.06
SIK3-203ENST00000415541 RASA1P20936 1047 aa8.43□□□□□ -1.06
SIK3-203ENST00000415541 CXCR5P32302 372 aa8.43□□□□□ -1.06
SIK3-203ENST00000415541 TECP42680 631 aa8.43□□□□□ -1.06
SIK3-203ENST00000415541 DNM2P50570 870 aa8.43□□□□□ -1.06
SIK3-203ENST00000415541 SP4Q02446 784 aa8.43□□□□□ -1.06
SIK3-203ENST00000415541 SMYD1Q8NB12 490 aa8.43□□□□□ -1.06
SIK3-203ENST00000415541 KANSL2Q9H9L4 492 aa8.43□□□□□ -1.06
SIK3-203ENST00000415541 PCDH18Q9HCL0 1135 aa8.43□□□□□ -1.06
SIK3-203ENST00000415541 KCNMB3Q9NPA1 279 aa8.43□□□□□ -1.06
SIK3-203ENST00000415541 LRWD1Q9UFC0 647 aa8.43□□□□□ -1.06
SIK3-203ENST00000415541 ZNF148Q9UQR1 794 aa8.43□□□□□ -1.06
SIK3-203ENST00000415541 SH3GLB1Q9Y371 365 aa8.43□□□□□ -1.06
SIK3-203ENST00000415541 CCDC169A6NNP5 214 aa8.43□□□□□ -1.06
SIK3-203ENST00000415541 O00370 1275 aa8.43□□□□□ -1.06
SIK3-203ENST00000415541 CHMP2AO43633 222 aa8.43□□□□□ -1.06
SIK3-203ENST00000415541 RCN2Q14257 317 aa8.43□□□□□ -1.06
SIK3-203ENST00000415541 MAP7D1Q3KQU3 841 aa8.43□□□□□ -1.06
SIK3-203ENST00000415541 STRIP1Q5VSL9 837 aa8.43□□□□□ -1.06
SIK3-203ENST00000415541 MAEAQ7L5Y9 396 aa8.43□□□□□ -1.06
SIK3-203ENST00000415541 LRRC34Q8IZ02 419 aa8.43□□□□□ -1.06
SIK3-203ENST00000415541 KIF2BQ8N4N8 673 aa8.43□□□□□ -1.06
SIK3-203ENST00000415541 MB21D1Q8N884 522 aa8.43□□□□□ -1.06
SIK3-203ENST00000415541 STKLD1Q8NE28 680 aa8.43□□□□□ -1.06
SIK3-203ENST00000415541 WDR60Q8WVS4 1066 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms