RNA–Protein interactions for RNA: ENST00000414411.3

DDB1-202, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,904 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-202ENST00000414411 TSEN34Q9BSV6 310 aaKnown RBP11.03□□□□□ -0.64
DDB1-202ENST00000414411 MFRPQ9BY79 579 aa11.03□□□□□ -0.64
DDB1-202ENST00000414411 NIFKQ9BYG3 293 aaKnown RBP11.03□□□□□ -0.64
DDB1-202ENST00000414411 STK17AQ9UEE5 414 aa11.03□□□□□ -0.64
DDB1-202ENST00000414411 DNM3Q9UQ16 869 aa11.03□□□□□ -0.64
DDB1-202ENST00000414411 NFE2L3Q9Y4A8 694 aa11.03□□□□□ -0.64
DDB1-202ENST00000414411 KAT6AQ92794 2004 aa11.02□□□□□ -0.64
DDB1-202ENST00000414411 NRDCO43847 1150 aa11.02□□□□□ -0.65
DDB1-202ENST00000414411 SGPL1O95470 568 aa11.02□□□□□ -0.65
DDB1-202ENST00000414411 EYA4O95677 639 aa11.02□□□□□ -0.65
DDB1-202ENST00000414411 ASGR1P07306 291 aa11.02□□□□□ -0.65
DDB1-202ENST00000414411 ERCC5P28715 1186 aaPredicted RBP11.02□□□□□ -0.65
DDB1-202ENST00000414411 YWHABP31946 246 aaKnown RBP11.02□□□□□ -0.65
DDB1-202ENST00000414411 TARBP2Q15633 366 aaKnown RBP11.02□□□□□ -0.65
DDB1-202ENST00000414411 E4F1Q66K89 784 aaPredicted RBP11.02□□□□□ -0.65
DDB1-202ENST00000414411 ARRDC4Q8NCT1 418 aa11.02□□□□□ -0.65
DDB1-202ENST00000414411 PIGOQ8TEQ8 1089 aa11.02□□□□□ -0.65
DDB1-202ENST00000414411 ATP8B4Q8TF62 1192 aa11.02□□□□□ -0.65
DDB1-202ENST00000414411 PAGE5Q96GU1 130 aa11.02□□□□□ -0.65
DDB1-202ENST00000414411 CEP89Q96ST8 783 aa11.02□□□□□ -0.65
DDB1-202ENST00000414411 MTRQ99707 1265 aa11.02□□□□□ -0.65
DDB1-202ENST00000414411 ANKEF1Q9NU02 776 aa11.02□□□□□ -0.65
DDB1-202ENST00000414411 INTS13Q9NVM9 706 aa11.02□□□□□ -0.65
DDB1-202ENST00000414411 KBTBD4Q9NVX7 518 aa11.02□□□□□ -0.65
DDB1-202ENST00000414411 DBR1Q9UK59 544 aaKnown RBP11.02□□□□□ -0.65
DDB1-202ENST00000414411 TMEM150BA6NC51 233 aa11.01□□□□□ -0.65
DDB1-202ENST00000414411 ZBTB42B2RXF5 422 aa11.01□□□□□ -0.65
DDB1-202ENST00000414411 ZEB2O60315 1214 aa11.01□□□□□ -0.65
DDB1-202ENST00000414411 OATP04181 439 aa11.01□□□□□ -0.65
DDB1-202ENST00000414411 MYL3P08590 195 aa11.01□□□□□ -0.65
DDB1-202ENST00000414411 STAT6P42226 847 aa11.01□□□□□ -0.65
DDB1-202ENST00000414411 CT47A1Q5JQC4 288 aaPredicted RBP11.01□□□□□ -0.65
DDB1-202ENST00000414411 CXCL17Q6UXB2 119 aa11.01□□□□□ -0.65
DDB1-202ENST00000414411 SYT2Q8N9I0 419 aaPredicted RBP11.01□□□□□ -0.65
DDB1-202ENST00000414411 RASSF8Q8NHQ8 419 aa11.01□□□□□ -0.65
DDB1-202ENST00000414411 U2AF1L4Q8WU68 220 aaKnown RBP11.01□□□□□ -0.65
DDB1-202ENST00000414411 LARP4BQ92615 738 aaKnown RBP11.01□□□□□ -0.65
DDB1-202ENST00000414411 RAD54LQ92698 747 aa11.01□□□□□ -0.65
DDB1-202ENST00000414411 FAM167AQ96KS9 214 aa11.01□□□□□ -0.65
DDB1-202ENST00000414411 MED15Q96RN5 788 aa11.01□□□□□ -0.65
DDB1-202ENST00000414411 MTG1Q9BT17 334 aaPredicted RBP11.01□□□□□ -0.65
DDB1-202ENST00000414411 CUEDC2Q9H467 287 aa11.01□□□□□ -0.65
DDB1-202ENST00000414411 NRBP2Q9NSY0 501 aa11.01□□□□□ -0.65
DDB1-202ENST00000414411 TRMT1Q9NXH9 659 aaKnown RBP11.01□□□□□ -0.65
DDB1-202ENST00000414411 ZNF215Q9UL58 517 aaPredicted RBP11.01□□□□□ -0.65
DDB1-202ENST00000414411 LOXHD1Q8IVV2 1947 aa11.01□□□□□ -0.65
DDB1-202ENST00000414411 MOXD2PA6NHM9 499 aa11.01□□□□□ -0.65
DDB1-202ENST00000414411 KIF2AO00139 706 aaPredicted RBP11.01□□□□□ -0.65
DDB1-202ENST00000414411 PLA2G4BP0C869 781 aa11.01□□□□□ -0.65
DDB1-202ENST00000414411 AFMP43652 599 aa11.01□□□□□ -0.65
DDB1-202ENST00000414411 GJA8P48165 433 aa11.01□□□□□ -0.65
DDB1-202ENST00000414411 RARRES1P49788 294 aa11.01□□□□□ -0.65
DDB1-202ENST00000414411 ACLYP53396 1101 aa11.01□□□□□ -0.65
DDB1-202ENST00000414411 SLC12A3P55017 1021 aa11.01□□□□□ -0.65
DDB1-202ENST00000414411 DPYDQ12882 1025 aa11.01□□□□□ -0.65
DDB1-202ENST00000414411 KIAA0753Q2KHM9 967 aa11.01□□□□□ -0.65
DDB1-202ENST00000414411 OTUD6AQ7L8S5 288 aa11.01□□□□□ -0.65
DDB1-202ENST00000414411 CCDC112Q8NEF3 446 aa11.01□□□□□ -0.65
DDB1-202ENST00000414411 GSDMAQ96QA5 445 aa11.01□□□□□ -0.65
DDB1-202ENST00000414411 BHMT2Q9H2M3 363 aa11.01□□□□□ -0.65
DDB1-202ENST00000414411 TRIP12Q14669 1992 aaPredicted RBP11□□□□□ -0.65
DDB1-202ENST00000414411 DNM1LO00429 736 aa11□□□□□ -0.65
DDB1-202ENST00000414411 HBP1O60381 514 aa11□□□□□ -0.65
DDB1-202ENST00000414411 CABYRO75952 493 aa11□□□□□ -0.65
DDB1-202ENST00000414411 MARK3P27448 753 aa11□□□□□ -0.65
DDB1-202ENST00000414411 PSEN2P49810 448 aa11□□□□□ -0.65
DDB1-202ENST00000414411 NPEPPSP55786 919 aa11□□□□□ -0.65
DDB1-202ENST00000414411 MCM6Q14566 821 aa11□□□□□ -0.65
DDB1-202ENST00000414411 MFSD10Q14728 455 aa11□□□□□ -0.65
DDB1-202ENST00000414411 PLA2G4FQ68DD2 849 aa11□□□□□ -0.65
DDB1-202ENST00000414411 TRMT1LQ7Z2T5 733 aaKnown RBP11□□□□□ -0.65
DDB1-202ENST00000414411 KIF12Q96FN5 646 aa11□□□□□ -0.65
DDB1-202ENST00000414411 PPP1R13BQ96KQ4 1090 aa11□□□□□ -0.65
DDB1-202ENST00000414411 SH2D3AQ9BRG2 576 aa11□□□□□ -0.65
DDB1-202ENST00000414411 TMX1Q9H3N1 280 aa11□□□□□ -0.65
DDB1-202ENST00000414411 PDLIM7Q9NR12 457 aa11□□□□□ -0.65
DDB1-202ENST00000414411 CYP26B1Q9NR63 512 aa11□□□□□ -0.65
DDB1-202ENST00000414411 PHF24Q9UPV7 400 aa11□□□□□ -0.65
DDB1-202ENST00000414411 GRIN2DO15399 1336 aa11□□□□□ -0.65
DDB1-202ENST00000414411 INSRRP14616 1297 aa10.99□□□□□ -0.65
DDB1-202ENST00000414411 HOXC8P31273 242 aa10.99□□□□□ -0.65
DDB1-202ENST00000414411 CUL4BQ13620 913 aa10.99□□□□□ -0.65
DDB1-202ENST00000414411 HSP90AA4PQ58FG1 418 aa10.99□□□□□ -0.65
DDB1-202ENST00000414411 ARSHQ5FYA8 562 aa10.99□□□□□ -0.65
DDB1-202ENST00000414411 XKR9Q5GH70 373 aa10.99□□□□□ -0.65
DDB1-202ENST00000414411 RINT1Q6NUQ1 792 aa10.99□□□□□ -0.65
DDB1-202ENST00000414411 C1orf186Q6ZWK4 172 aa10.99□□□□□ -0.65
DDB1-202ENST00000414411 SV2BQ7L1I2 683 aa10.99□□□□□ -0.65
DDB1-202ENST00000414411 KATNAL1Q9BW62 490 aa10.99□□□□□ -0.65
DDB1-202ENST00000414411 MAGEF1Q9HAY2 307 aa10.99□□□□□ -0.65
DDB1-202ENST00000414411 SEPT9Q9UHD8 586 aaPredicted RBP10.99□□□□□ -0.65
DDB1-202ENST00000414411 PPME1Q9Y570 386 aa10.99□□□□□ -0.65
DDB1-202ENST00000414411 ARID2Q68CP9 1835 aa10.99□□□□□ -0.65
DDB1-202ENST00000414411 EVPLQ92817 2033 aa10.99□□□□□ -0.65
DDB1-202ENST00000414411 CAPN2P17655 700 aa10.99□□□□□ -0.65
DDB1-202ENST00000414411 CASP1P29466 404 aa10.99□□□□□ -0.65
DDB1-202ENST00000414411 ADAM17P78536 824 aa10.99□□□□□ -0.65
DDB1-202ENST00000414411 TBX2Q13207 712 aaPredicted RBP10.99□□□□□ -0.65
DDB1-202ENST00000414411 SYCP1Q15431 976 aa10.99□□□□□ -0.65
DDB1-202ENST00000414411 NBPF20Q3BBV1 942 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms