RNA–Protein interactions for RNA: ENST00000413593.5

TMEM248-202, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-202ENST00000413593 LAMA2P24043 3122 aaKnown RBP11.24□□□□□ -0.61
TMEM248-202ENST00000413593 A0A087WWV3 80 aa11.24□□□□□ -0.61
TMEM248-202ENST00000413593 LCHNA4D1U4 455 aa11.24□□□□□ -0.61
TMEM248-202ENST00000413593 GPR182O15218 404 aa11.24□□□□□ -0.61
TMEM248-202ENST00000413593 GAS2O43903 313 aaKnown RBP11.24□□□□□ -0.61
TMEM248-202ENST00000413593 XRCC6P12956 609 aaKnown RBP eCLIP11.24□□□□□ -0.61
TMEM248-202ENST00000413593 DARSP14868 501 aaKnown RBP11.24□□□□□ -0.61
TMEM248-202ENST00000413593 RARRES1P49788 294 aa11.24□□□□□ -0.61
TMEM248-202ENST00000413593 HTRA4P83105 476 aaPredicted RBP11.24□□□□□ -0.61
TMEM248-202ENST00000413593 CDC42EP1Q00587 391 aa11.24□□□□□ -0.61
TMEM248-202ENST00000413593 ODR4Q5SWX8 454 aa11.24□□□□□ -0.61
TMEM248-202ENST00000413593 POTEGQ6S5H5 508 aa11.24□□□□□ -0.61
TMEM248-202ENST00000413593 DTHD1Q6ZMT9 781 aa11.24□□□□□ -0.61
TMEM248-202ENST00000413593 RHPN2Q8IUC4 686 aa11.24□□□□□ -0.61
TMEM248-202ENST00000413593 NLRP7Q8WX94 980 aa11.24□□□□□ -0.61
TMEM248-202ENST00000413593 TMEM143Q96AN5 459 aa11.24□□□□□ -0.61
TMEM248-202ENST00000413593 CCDC43Q96MW1 224 aaKnown RBP11.24□□□□□ -0.61
TMEM248-202ENST00000413593 SCLT1Q96NL6 688 aa11.24□□□□□ -0.61
TMEM248-202ENST00000413593 RAB34Q9BZG1 259 aa11.24□□□□□ -0.61
TMEM248-202ENST00000413593 TSPYL2Q9H2G4 693 aaPredicted RBP11.24□□□□□ -0.61
TMEM248-202ENST00000413593 XPNPEP1Q9NQW7 623 aa11.24□□□□□ -0.61
TMEM248-202ENST00000413593 BMP2KQ9NSY1 1161 aaPredicted RBP11.24□□□□□ -0.61
TMEM248-202ENST00000413593 MTMR6Q9Y217 621 aa11.24□□□□□ -0.61
TMEM248-202ENST00000413593 SIP14410 1827 aa11.23□□□□□ -0.61
TMEM248-202ENST00000413593 KAT6AQ92794 2004 aa11.23□□□□□ -0.61
TMEM248-202ENST00000413593 A0A087WZ62 844 aa11.23□□□□□ -0.61
TMEM248-202ENST00000413593 MGEA5O60502 916 aa11.23□□□□□ -0.61
TMEM248-202ENST00000413593 DGAT1O75907 488 aa11.23□□□□□ -0.61
TMEM248-202ENST00000413593 UPP2O95045 317 aa11.23□□□□□ -0.61
TMEM248-202ENST00000413593 MUTP22033 750 aa11.23□□□□□ -0.61
TMEM248-202ENST00000413593 CCT6AP40227 531 aaKnown RBP11.23□□□□□ -0.61
TMEM248-202ENST00000413593 TAP1Q03518 808 aa11.23□□□□□ -0.61
TMEM248-202ENST00000413593 RESTQ13127 1097 aa11.23□□□□□ -0.61
TMEM248-202ENST00000413593 ARL6IP4Q66PJ3 421 aaKnown RBP11.23□□□□□ -0.61
TMEM248-202ENST00000413593 ZNF410Q86VK4 478 aa11.23□□□□□ -0.61
TMEM248-202ENST00000413593 KSR1Q8IVT5 923 aa11.23□□□□□ -0.61
TMEM248-202ENST00000413593 CRIPAKQ8N1N5 446 aa11.23□□□□□ -0.61
TMEM248-202ENST00000413593 SP7Q8TDD2 431 aaPredicted RBP11.23□□□□□ -0.61
TMEM248-202ENST00000413593 SNX29Q8TEQ0 813 aa11.23□□□□□ -0.61
TMEM248-202ENST00000413593 PRPF31Q8WWY3 499 aaKnown RBP11.23□□□□□ -0.61
TMEM248-202ENST00000413593 PSPC1Q8WXF1 523 aaKnown RBP11.23□□□□□ -0.61
TMEM248-202ENST00000413593 MYLIPQ8WY64 445 aa11.23□□□□□ -0.61
TMEM248-202ENST00000413593 NACC1Q96RE7 527 aa11.23□□□□□ -0.61
TMEM248-202ENST00000413593 FDXACB1Q9BRP7 624 aaPredicted RBP11.23□□□□□ -0.61
TMEM248-202ENST00000413593 GCOM2Q9BZD3 368 aaPredicted RBP11.23□□□□□ -0.61
TMEM248-202ENST00000413593 ATP6V0A4Q9HBG4 840 aa11.23□□□□□ -0.61
TMEM248-202ENST00000413593 DBR1Q9UK59 544 aaKnown RBP11.23□□□□□ -0.61
TMEM248-202ENST00000413593 STXBP5LQ9Y2K9 1186 aa11.23□□□□□ -0.61
TMEM248-202ENST00000413593 INSL6Q9Y581 213 aa11.23□□□□□ -0.61
TMEM248-202ENST00000413593 COL4A3BPQ9Y5P4 624 aa11.23□□□□□ -0.61
TMEM248-202ENST00000413593 STK24Q9Y6E0 443 aa11.23□□□□□ -0.61
TMEM248-202ENST00000413593 LINC01553A4QN01 128 aa11.22□□□□□ -0.61
TMEM248-202ENST00000413593 PP2D1A8MPX8 630 aa11.22□□□□□ -0.61
TMEM248-202ENST00000413593 STX6O43752 255 aa11.22□□□□□ -0.61
TMEM248-202ENST00000413593 USO1O60763 962 aaKnown RBP11.22□□□□□ -0.61
TMEM248-202ENST00000413593 BMP15O95972 392 aa11.22□□□□□ -0.61
TMEM248-202ENST00000413593 MYH9P35579 1960 aaKnown RBP11.22□□□□□ -0.61
TMEM248-202ENST00000413593 DSC3Q14574 896 aa11.22□□□□□ -0.61
TMEM248-202ENST00000413593 ECM1Q16610 540 aa11.22□□□□□ -0.61
TMEM248-202ENST00000413593 KRT79Q5XKE5 535 aa11.22□□□□□ -0.61
TMEM248-202ENST00000413593 SPRED2Q7Z698 418 aa11.22□□□□□ -0.61
TMEM248-202ENST00000413593 TCP11Q8WWU5 503 aa11.22□□□□□ -0.61
TMEM248-202ENST00000413593 NLRP4Q96MN2 994 aa11.22□□□□□ -0.61
TMEM248-202ENST00000413593 YME1L1Q96TA2 773 aa11.22□□□□□ -0.61
TMEM248-202ENST00000413593 MTRQ99707 1265 aa11.22□□□□□ -0.61
TMEM248-202ENST00000413593 ADAM2Q99965 735 aa11.22□□□□□ -0.61
TMEM248-202ENST00000413593 MMTAG2Q9BU76 263 aaKnown RBP11.22□□□□□ -0.61
TMEM248-202ENST00000413593 PRDM12Q9H4Q4 367 aa11.22□□□□□ -0.61
TMEM248-202ENST00000413593 RC3H2Q9HBD1 1191 aaKnown RBP11.22□□□□□ -0.61
TMEM248-202ENST00000413593 IFT122Q9HBG6 1241 aa11.22□□□□□ -0.61
TMEM248-202ENST00000413593 RGS18Q9NS28 235 aa11.22□□□□□ -0.61
TMEM248-202ENST00000413593 CHD9Q3L8U1 2897 aa11.22□□□□□ -0.61
TMEM248-202ENST00000413593 DENND3A2RUS2 1198 aa11.21□□□□□ -0.61
TMEM248-202ENST00000413593 VWA3AA6NCI4 1184 aa11.21□□□□□ -0.61
TMEM248-202ENST00000413593 C9IYK1 514 aa11.21□□□□□ -0.61
TMEM248-202ENST00000413593 CSDE1O75534 798 aaKnown RBP11.21□□□□□ -0.61
TMEM248-202ENST00000413593 HSP90AA1P07900 732 aaKnown RBP11.21□□□□□ -0.61
TMEM248-202ENST00000413593 FGFR4P22455 802 aa11.21□□□□□ -0.61
TMEM248-202ENST00000413593 SFPQP23246 707 aaKnown RBP eCLIP11.21□□□□□ -0.61
TMEM248-202ENST00000413593 CDC25AP30304 524 aa11.21□□□□□ -0.61
TMEM248-202ENST00000413593 SARSP49591 514 aaKnown RBP11.21□□□□□ -0.61
TMEM248-202ENST00000413593 LAMTOR4Q0VGL1 99 aa11.21□□□□□ -0.61
TMEM248-202ENST00000413593 SF3A1Q15459 793 aaKnown RBP11.21□□□□□ -0.61
TMEM248-202ENST00000413593 FAM173BQ6P4H8 233 aa11.21□□□□□ -0.61
TMEM248-202ENST00000413593 PADI6Q6TGC4 694 aa11.21□□□□□ -0.61
TMEM248-202ENST00000413593 SLC24A5Q71RS6 500 aa11.21□□□□□ -0.61
TMEM248-202ENST00000413593 NPAS4Q8IUM7 802 aa11.21□□□□□ -0.61
TMEM248-202ENST00000413593 INO80BQ9C086 356 aaPredicted RBP11.21□□□□□ -0.61
TMEM248-202ENST00000413593 CERS4Q9HA82 394 aa11.21□□□□□ -0.61
TMEM248-202ENST00000413593 C1orf112Q9NSG2 853 aa11.21□□□□□ -0.61
TMEM248-202ENST00000413593 KIAA1024Q9UPX6 916 aa11.21□□□□□ -0.61
TMEM248-202ENST00000413593 ARHGEF35A5YM69 484 aa11.2□□□□□ -0.62
TMEM248-202ENST00000413593 EPOPA6NHQ4 379 aa11.2□□□□□ -0.62
TMEM248-202ENST00000413593 ASAP2O43150 1006 aa11.2□□□□□ -0.62
TMEM248-202ENST00000413593 DGKIO75912 1065 aa11.2□□□□□ -0.62
TMEM248-202ENST00000413593 STAG3L1P0CL83 205 aa11.2□□□□□ -0.62
TMEM248-202ENST00000413593 SRGAP2CP0DJJ0 459 aa11.2□□□□□ -0.62
TMEM248-202ENST00000413593 FOSL2P15408 326 aa11.2□□□□□ -0.62
TMEM248-202ENST00000413593 ZSCAN20P17040 1043 aaPredicted RBP11.2□□□□□ -0.62
TMEM248-202ENST00000413593 ARL2P36404 184 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms