RNA–Protein interactions for RNA: ENST00000413364.6

LITAF-203, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 2 BASIC

Gene LITAF, Length 2,292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-203ENST00000413364 JAKMIP2Q96AA8 810 aa14.19□□□□□ -0.14
LITAF-203ENST00000413364 CCDC42Q96M95 316 aa14.19□□□□□ -0.14
LITAF-203ENST00000413364 TAAR1Q96RJ0 339 aa14.19□□□□□ -0.14
LITAF-203ENST00000413364 PARVGQ9HBI0 331 aa14.19□□□□□ -0.14
LITAF-203ENST00000413364 POLD4Q9HCU8 107 aa14.19□□□□□ -0.14
LITAF-203ENST00000413364 CHCHD3Q9NX63 227 aaKnown RBP14.19□□□□□ -0.14
LITAF-203ENST00000413364 CEP72Q9P209 647 aa14.19□□□□□ -0.14
LITAF-203ENST00000413364 TRIM10Q9UDY6 481 aa14.19□□□□□ -0.14
LITAF-203ENST00000413364 CDC23Q9UJX2 597 aa14.19□□□□□ -0.14
LITAF-203ENST00000413364 GUCA1BQ9UMX6 200 aa14.19□□□□□ -0.14
LITAF-203ENST00000413364 LRRC53A6NM62 1247 aa14.18□□□□□ -0.14
LITAF-203ENST00000413364 NR3C1P04150 777 aa14.18□□□□□ -0.14
LITAF-203ENST00000413364 RPL13P26373 211 aaKnown RBP14.18□□□□□ -0.14
LITAF-203ENST00000413364 CLNS1AP54105 237 aaKnown RBP14.18□□□□□ -0.14
LITAF-203ENST00000413364 ITGB3BPQ13352 177 aaPredicted RBP14.18□□□□□ -0.14
LITAF-203ENST00000413364 CCDC122Q5T0U0 273 aa14.18□□□□□ -0.14
LITAF-203ENST00000413364 CACNA2D4Q7Z3S7 1137 aa14.18□□□□□ -0.14
LITAF-203ENST00000413364 SPATS2Q86XZ4 545 aaKnown RBP14.18□□□□□ -0.14
LITAF-203ENST00000413364 TRPM4Q8TD43 1214 aa14.18□□□□□ -0.14
LITAF-203ENST00000413364 ATG4CQ96DT6 458 aa14.18□□□□□ -0.14
LITAF-203ENST00000413364 THOC1Q96FV9 657 aaKnown RBP14.18□□□□□ -0.14
LITAF-203ENST00000413364 C12orf42Q96LP6 360 aa14.18□□□□□ -0.14
LITAF-203ENST00000413364 LSM14BQ9BX40 385 aaKnown RBP14.18□□□□□ -0.14
LITAF-203ENST00000413364 GPRC5DQ9NZD1 345 aa14.18□□□□□ -0.14
LITAF-203ENST00000413364 ARHGAP20Q9P2F6 1191 aa14.18□□□□□ -0.14
LITAF-203ENST00000413364 ARMCX3Q9UH62 379 aaPredicted RBP14.18□□□□□ -0.14
LITAF-203ENST00000413364 ARHGEF35A5YM69 484 aa14.18□□□□□ -0.14
LITAF-203ENST00000413364 SFI1A8K8P3 1242 aa14.18□□□□□ -0.14
LITAF-203ENST00000413364 DDX39AO00148 427 aaKnown RBP14.18□□□□□ -0.14
LITAF-203ENST00000413364 SLC16A3O15427 465 aaKnown RBP14.18□□□□□ -0.14
LITAF-203ENST00000413364 NOL4O94818 638 aa14.18□□□□□ -0.14
LITAF-203ENST00000413364 P4HBP07237 508 aaKnown RBP14.18□□□□□ -0.14
LITAF-203ENST00000413364 TUBBP07437 444 aa14.18□□□□□ -0.14
LITAF-203ENST00000413364 EIF2AK2P19525 551 aaKnown RBP14.18□□□□□ -0.14
LITAF-203ENST00000413364 MTMR1Q13613 665 aa14.18□□□□□ -0.14
LITAF-203ENST00000413364 BEND6Q5SZJ8 279 aaPredicted RBP14.18□□□□□ -0.14
LITAF-203ENST00000413364 PRAMEF18Q5VWM3 479 aa14.18□□□□□ -0.14
LITAF-203ENST00000413364 TRIM74Q86UV6 250 aa14.18□□□□□ -0.14
LITAF-203ENST00000413364 TRIM73Q86UV7 250 aa14.18□□□□□ -0.14
LITAF-203ENST00000413364 AFAP1L1Q8TED9 768 aa14.18□□□□□ -0.14
LITAF-203ENST00000413364 GBP3Q9H0R5 595 aa14.18□□□□□ -0.14
LITAF-203ENST00000413364 BATF3Q9NR55 127 aa14.18□□□□□ -0.14
LITAF-203ENST00000413364 PKD2L1Q9P0L9 805 aa14.18□□□□□ -0.14
LITAF-203ENST00000413364 UBE4BO95155 1302 aa14.18□□□□□ -0.14
LITAF-203ENST00000413364 KRT86O43790 486 aa14.17□□□□□ -0.14
LITAF-203ENST00000413364 FSBPO95073 299 aa14.17□□□□□ -0.14
LITAF-203ENST00000413364 PLEKP08567 350 aaPredicted RBP14.17□□□□□ -0.14
LITAF-203ENST00000413364 KCNH2Q12809 1159 aa14.17□□□□□ -0.14
LITAF-203ENST00000413364 PGM5Q15124 567 aa14.17□□□□□ -0.14
LITAF-203ENST00000413364 SPA17Q15506 151 aa14.17□□□□□ -0.14
LITAF-203ENST00000413364 NFIL3Q16649 462 aa14.17□□□□□ -0.14
LITAF-203ENST00000413364 RNF207Q6ZRF8 634 aa14.17□□□□□ -0.14
LITAF-203ENST00000413364 CCDC50Q8IVM0 306 aa14.17□□□□□ -0.14
LITAF-203ENST00000413364 EHBP1Q8NDI1 1231 aa14.17□□□□□ -0.14
LITAF-203ENST00000413364 SYN2Q92777 582 aaPredicted RBP14.17□□□□□ -0.14
LITAF-203ENST00000413364 FAM204AQ9H8W3 233 aa14.17□□□□□ -0.14
LITAF-203ENST00000413364 METTL14Q9HCE5 456 aaKnown RBP14.17□□□□□ -0.14
LITAF-203ENST00000413364 MYO6Q9UM54 1294 aa14.17□□□□□ -0.14
LITAF-203ENST00000413364 PPP2R3BQ9Y5P8 575 aa14.17□□□□□ -0.14
LITAF-203ENST00000413364 C19orf81C9J6K1 198 aa14.17□□□□□ -0.14
LITAF-203ENST00000413364 TGFB1I1O43294 461 aa14.17□□□□□ -0.14
LITAF-203ENST00000413364 LCA5LO95447 670 aa14.17□□□□□ -0.14
LITAF-203ENST00000413364 NMT1P30419 496 aaKnown RBP14.17□□□□□ -0.14
LITAF-203ENST00000413364 EIF4A3P38919 411 aaKnown RBP14.17□□□□□ -0.14
LITAF-203ENST00000413364 EPS15P42566 896 aa14.17□□□□□ -0.14
LITAF-203ENST00000413364 VAV2P52735 878 aa14.17□□□□□ -0.14
LITAF-203ENST00000413364 KCNA1Q09470 495 aa14.17□□□□□ -0.14
LITAF-203ENST00000413364 STXBP4Q6ZWJ1 553 aa14.17□□□□□ -0.14
LITAF-203ENST00000413364 REPS2Q8NFH8 660 aa14.17□□□□□ -0.14
LITAF-203ENST00000413364 ZNF526Q8TF50 670 aaPredicted RBP14.17□□□□□ -0.14
LITAF-203ENST00000413364 WNK4Q96J92 1243 aa14.17□□□□□ -0.14
LITAF-203ENST00000413364 FIZ1Q96SL8 496 aa14.17□□□□□ -0.14
LITAF-203ENST00000413364 RMDN3Q96TC7 470 aa14.17□□□□□ -0.14
LITAF-203ENST00000413364 PDCD2LQ9BRP1 358 aa14.17□□□□□ -0.14
LITAF-203ENST00000413364 CRACR2AQ9BSW2 395 aa14.17□□□□□ -0.14
LITAF-203ENST00000413364 ZSWIM4Q9H7M6 989 aa14.17□□□□□ -0.14
LITAF-203ENST00000413364 PXMP2Q9NR77 195 aa14.17□□□□□ -0.14
LITAF-203ENST00000413364 RNF146Q9NTX7 359 aa14.17□□□□□ -0.14
LITAF-203ENST00000413364 TBC1D22BQ9NU19 505 aa14.17□□□□□ -0.14
LITAF-203ENST00000413364 GGA3Q9NZ52 723 aa14.17□□□□□ -0.14
LITAF-203ENST00000413364 ZHX2Q9Y6X8 837 aa14.17□□□□□ -0.14
LITAF-203ENST00000413364 ZMYM2Q9UBW7 1377 aa14.17□□□□□ -0.14
LITAF-203ENST00000413364 RCCD1A6NED2 376 aa14.16□□□□□ -0.14
LITAF-203ENST00000413364 ZNF263O14978 683 aa14.16□□□□□ -0.14
LITAF-203ENST00000413364 AKAP3O75969 853 aa14.16□□□□□ -0.14
LITAF-203ENST00000413364 EPB41P11171 864 aaKnown RBP14.16□□□□□ -0.14
LITAF-203ENST00000413364 EZRP15311 586 aaKnown RBP14.16□□□□□ -0.14
LITAF-203ENST00000413364 KIF11P52732 1056 aa14.16□□□□□ -0.14
LITAF-203ENST00000413364 OAZ1P54368 228 aa14.16□□□□□ -0.14
LITAF-203ENST00000413364 HMGCS2P54868 508 aa14.16□□□□□ -0.14
LITAF-203ENST00000413364 CYP27A1Q02318 531 aa14.16□□□□□ -0.14
LITAF-203ENST00000413364 NSMFQ6X4W1 530 aa14.16□□□□□ -0.14
LITAF-203ENST00000413364 ZNF720Q7Z2F6 126 aa14.16□□□□□ -0.14
LITAF-203ENST00000413364 SAAL1Q96ER3 474 aa14.16□□□□□ -0.14
LITAF-203ENST00000413364 TSGA10Q9BZW7 698 aa14.16□□□□□ -0.14
LITAF-203ENST00000413364 LACRTQ9GZZ8 138 aa14.16□□□□□ -0.14
LITAF-203ENST00000413364 TFR2Q9UP52 801 aa14.16□□□□□ -0.14
LITAF-203ENST00000413364 PARP14Q460N5 1801 aa14.16□□□□□ -0.14
LITAF-203ENST00000413364 SHOX2O60902 331 aaPredicted RBP14.16□□□□□ -0.14
LITAF-203ENST00000413364 LYPLA2O95372 231 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms