RNA–Protein interactions for RNA: ENST00000412393.5

LINC00342-201, long intergenic non-protein coding RNA 342, humanhuman

TSL 3 BASIC

Gene LINC00342, Length 654 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-201ENST00000412393 ADGRA2Q96PE1 1338 aa6.3□□□□□ -1.4
LINC00342-201ENST00000412393 PRAMEF27A3QJZ7 478 aa6.3□□□□□ -1.4
LINC00342-201ENST00000412393 GOLIM4O00461 696 aa6.3□□□□□ -1.4
LINC00342-201ENST00000412393 HLA-DOAP06340 250 aa6.3□□□□□ -1.4
LINC00342-201ENST00000412393 ASNSP08243 561 aa6.3□□□□□ -1.4
LINC00342-201ENST00000412393 ZGLP1P0C6A0 271 aa6.3□□□□□ -1.4
LINC00342-201ENST00000412393 CYP2C8P10632 490 aa6.3□□□□□ -1.4
LINC00342-201ENST00000412393 PRMT2P55345 433 aa6.3□□□□□ -1.4
LINC00342-201ENST00000412393 ETF1P62495 437 aaKnown RBP6.3□□□□□ -1.4
LINC00342-201ENST00000412393 NFKB2Q00653 900 aa6.3□□□□□ -1.4
LINC00342-201ENST00000412393 SPP2Q13103 211 aa6.3□□□□□ -1.4
LINC00342-201ENST00000412393 SLC4A8Q2Y0W8 1093 aa6.3□□□□□ -1.4
LINC00342-201ENST00000412393 GGNQ86UU5 652 aa6.3□□□□□ -1.4
LINC00342-201ENST00000412393 DNAJC2Q99543 621 aaKnown RBP6.3□□□□□ -1.4
LINC00342-201ENST00000412393 ARHGAP39Q9C0H5 1083 aa6.3□□□□□ -1.4
LINC00342-201ENST00000412393 FBRSQ9HAH7 460 aa6.3□□□□□ -1.4
LINC00342-201ENST00000412393 AS3MTQ9HBK9 375 aa6.3□□□□□ -1.4
LINC00342-201ENST00000412393 GCM1Q9NP62 436 aa6.3□□□□□ -1.4
LINC00342-201ENST00000412393 GPATCH2Q9NW75 528 aa6.3□□□□□ -1.4
LINC00342-201ENST00000412393 PTCH2Q9Y6C5 1203 aa6.3□□□□□ -1.4
LINC00342-201ENST00000412393 CARNS1A5YM72 827 aa6.29□□□□□ -1.4
LINC00342-201ENST00000412393 PDE6AP16499 860 aa6.29□□□□□ -1.4
LINC00342-201ENST00000412393 ATP5JP18859 108 aa6.29□□□□□ -1.4
LINC00342-201ENST00000412393 HOXD10P28358 340 aa6.29□□□□□ -1.4
LINC00342-201ENST00000412393 CTGFP29279 349 aa6.29□□□□□ -1.4
LINC00342-201ENST00000412393 PSMC4P43686 418 aa6.29□□□□□ -1.4
LINC00342-201ENST00000412393 KRTAP10-2P60368 255 aa6.29□□□□□ -1.4
LINC00342-201ENST00000412393 SLC9C1Q4G0N8 1177 aa6.29□□□□□ -1.4
LINC00342-201ENST00000412393 SLC9C2Q5TAH2 1124 aa6.29□□□□□ -1.4
LINC00342-201ENST00000412393 NXPE4Q6UWF7 544 aa6.29□□□□□ -1.4
LINC00342-201ENST00000412393 METTL16Q86W50 562 aaKnown RBP6.29□□□□□ -1.4
LINC00342-201ENST00000412393 SMCR8Q8TEV9 937 aaPredicted RBP6.29□□□□□ -1.4
LINC00342-201ENST00000412393 ARMC5Q96C12 935 aa6.29□□□□□ -1.4
LINC00342-201ENST00000412393 EDC3Q96F86 508 aaKnown RBP6.29□□□□□ -1.4
LINC00342-201ENST00000412393 RIOK1Q9BRS2 568 aaKnown RBP6.29□□□□□ -1.4
LINC00342-201ENST00000412393 CRNKL1Q9BZJ0 848 aaKnown RBP6.29□□□□□ -1.4
LINC00342-201ENST00000412393 LRRCC1Q9C099 1032 aa6.29□□□□□ -1.4
LINC00342-201ENST00000412393 BOLA2Q9H3K6 86 aa6.29□□□□□ -1.4
LINC00342-201ENST00000412393 TMPRSS5Q9H3S3 457 aa6.29□□□□□ -1.4
LINC00342-201ENST00000412393 DNAJC18Q9H819 358 aa6.29□□□□□ -1.4
LINC00342-201ENST00000412393 GINM1Q9NU53 330 aa6.29□□□□□ -1.4
LINC00342-201ENST00000412393 PAG1Q9NWQ8 432 aa6.29□□□□□ -1.4
LINC00342-201ENST00000412393 ZBTB21Q9ULJ3 1066 aa6.29□□□□□ -1.4
LINC00342-201ENST00000412393 AGTPBP1Q9UPW5 1226 aa6.29□□□□□ -1.4
LINC00342-201ENST00000412393 SLC45A1Q9Y2W3 748 aa6.29□□□□□ -1.4
LINC00342-201ENST00000412393 ZNF532Q9HCE3 1301 aa6.28□□□□□ -1.4
LINC00342-201ENST00000412393 SMARCA5O60264 1052 aaPredicted RBP6.28□□□□□ -1.4
LINC00342-201ENST00000412393 PTMSP20962 102 aa6.28□□□□□ -1.4
LINC00342-201ENST00000412393 TPP2P29144 1249 aaPredicted RBP6.28□□□□□ -1.4
LINC00342-201ENST00000412393 TRHRP34981 398 aaPredicted RBP6.28□□□□□ -1.4
LINC00342-201ENST00000412393 MRE11P49959 708 aa6.28□□□□□ -1.4
LINC00342-201ENST00000412393 HMGCS2P54868 508 aa6.28□□□□□ -1.4
LINC00342-201ENST00000412393 PABPC4Q13310 644 aaKnown RBP eCLIP6.28□□□□□ -1.4
LINC00342-201ENST00000412393 NKG7Q16617 165 aa6.28□□□□□ -1.4
LINC00342-201ENST00000412393 TREML2Q5T2D2 321 aa6.28□□□□□ -1.4
LINC00342-201ENST00000412393 PRAMEF13Q5VWM6 474 aa6.28□□□□□ -1.4
LINC00342-201ENST00000412393 LRFN4Q6PJG9 635 aa6.28□□□□□ -1.4
LINC00342-201ENST00000412393 RIN3Q8TB24 985 aa6.28□□□□□ -1.4
LINC00342-201ENST00000412393 SH3TC2Q8TF17 1288 aa6.28□□□□□ -1.4
LINC00342-201ENST00000412393 ZNF333Q96JL9 665 aa6.28□□□□□ -1.4
LINC00342-201ENST00000412393 SIGLEC10Q96LC7 697 aa6.28□□□□□ -1.4
LINC00342-201ENST00000412393 HAUS7Q99871 368 aa6.28□□□□□ -1.4
LINC00342-201ENST00000412393 DCTPP1Q9H773 170 aa6.28□□□□□ -1.4
LINC00342-201ENST00000412393 TMOD4Q9NZQ9 345 aa6.28□□□□□ -1.4
LINC00342-201ENST00000412393 SRRDQ9UH36 339 aa6.28□□□□□ -1.4
LINC00342-201ENST00000412393 SERPINB13Q9UIV8 391 aa6.28□□□□□ -1.4
LINC00342-201ENST00000412393 MYPNQ86TC9 1320 aa6.27□□□□□ -1.41
LINC00342-201ENST00000412393 TCRBV5S4A2TA0A5A2 114 aa6.27□□□□□ -1.41
LINC00342-201ENST00000412393 C19orf81C9J6K1 198 aa6.27□□□□□ -1.41
LINC00342-201ENST00000412393 XRCC6P12956 609 aaKnown RBP eCLIP6.27□□□□□ -1.41
LINC00342-201ENST00000412393 ADD2P35612 726 aa6.27□□□□□ -1.41
LINC00342-201ENST00000412393 GCLCP48506 637 aaPredicted RBP6.27□□□□□ -1.41
LINC00342-201ENST00000412393 PLCD1P51178 756 aa6.27□□□□□ -1.41
LINC00342-201ENST00000412393 BACE1P56817 501 aa6.27□□□□□ -1.41
LINC00342-201ENST00000412393 DUSP4Q13115 394 aa6.27□□□□□ -1.41
LINC00342-201ENST00000412393 INPP5AQ14642 412 aa6.27□□□□□ -1.41
LINC00342-201ENST00000412393 FAM110CQ1W6H9 321 aa6.27□□□□□ -1.41
LINC00342-201ENST00000412393 SHROOM1Q2M3G4 852 aaPredicted RBP6.27□□□□□ -1.41
LINC00342-201ENST00000412393 ZXDCQ2QGD7 858 aaPredicted RBP6.27□□□□□ -1.41
LINC00342-201ENST00000412393 SPATS1Q496A3 300 aa6.27□□□□□ -1.41
LINC00342-201ENST00000412393 CLEC17AQ6ZS10 378 aa6.27□□□□□ -1.41
LINC00342-201ENST00000412393 LCORLQ8N3X6 602 aa6.27□□□□□ -1.41
LINC00342-201ENST00000412393 RAET1EQ8TD07 263 aa6.27□□□□□ -1.41
LINC00342-201ENST00000412393 SDR42E1Q8WUS8 393 aa6.27□□□□□ -1.41
LINC00342-201ENST00000412393 KRTAP9-8Q9BYQ0 159 aa6.27□□□□□ -1.41
LINC00342-201ENST00000412393 GPR62Q9BZJ7 368 aa6.27□□□□□ -1.41
LINC00342-201ENST00000412393 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.27□□□□□ -1.41
LINC00342-201ENST00000412393 ASCC2Q9H1I8 757 aaPredicted RBP6.27□□□□□ -1.41
LINC00342-201ENST00000412393 DUSP15Q9H1R2 295 aaPredicted RBP6.27□□□□□ -1.41
LINC00342-201ENST00000412393 ARMT1Q9H993 441 aa6.27□□□□□ -1.41
LINC00342-201ENST00000412393 CABP5Q9NP86 173 aa6.27□□□□□ -1.41
LINC00342-201ENST00000412393 RRAGDQ9NQL2 400 aaPredicted RBP6.27□□□□□ -1.41
LINC00342-201ENST00000412393 MCM9Q9NXL9 1143 aa6.27□□□□□ -1.41
LINC00342-201ENST00000412393 DUSP13Q9UII6 198 aa6.27□□□□□ -1.41
LINC00342-201ENST00000412393 IRAK3Q9Y616 596 aa6.27□□□□□ -1.41
LINC00342-201ENST00000412393 PLXNB2O15031 1838 aa6.27□□□□□ -1.41
LINC00342-201ENST00000412393 TNRC18O15417 2968 aaPredicted RBP6.27□□□□□ -1.41
LINC00342-201ENST00000412393 TNPO2O14787 897 aaKnown RBP6.26□□□□□ -1.41
LINC00342-201ENST00000412393 GIPC1O14908 333 aa6.26□□□□□ -1.41
LINC00342-201ENST00000412393 PAGE1O75459 146 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms