RNA–Protein interactions for RNA: ENST00000412056.5

CPNE1-206, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 998 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-206ENST00000412056 SLC26A4O43511 780 aa15.52■□□□□ 0.08
CPNE1-206ENST00000412056 GAS2O43903 313 aaKnown RBP15.52■□□□□ 0.08
CPNE1-206ENST00000412056 CUTAO60888 179 aa15.52■□□□□ 0.08
CPNE1-206ENST00000412056 FGBP02675 491 aa15.52■□□□□ 0.08
CPNE1-206ENST00000412056 DNM2P50570 870 aa15.52■□□□□ 0.08
CPNE1-206ENST00000412056 CNKSR3Q6P9H4 555 aa15.52■□□□□ 0.08
CPNE1-206ENST00000412056 MAEAQ7L5Y9 396 aa15.52■□□□□ 0.08
CPNE1-206ENST00000412056 RHPN2Q8IUC4 686 aa15.52■□□□□ 0.08
CPNE1-206ENST00000412056 EXOC8Q8IYI6 725 aa15.52■□□□□ 0.08
CPNE1-206ENST00000412056 TDHQ8IZJ6 230 aa15.52■□□□□ 0.08
CPNE1-206ENST00000412056 DBF4BQ8NFT6 615 aa15.52■□□□□ 0.08
CPNE1-206ENST00000412056 RASSF8Q8NHQ8 419 aa15.52■□□□□ 0.08
CPNE1-206ENST00000412056 KCNG4Q8TDN1 519 aa15.52■□□□□ 0.08
CPNE1-206ENST00000412056 RNPC3Q96LT9 517 aaKnown RBP15.52■□□□□ 0.08
CPNE1-206ENST00000412056 AGO3Q9H9G7 860 aaKnown RBP15.52■□□□□ 0.08
CPNE1-206ENST00000412056 RCOR1Q9UKL0 485 aa15.52■□□□□ 0.08
CPNE1-206ENST00000412056 CIZ1Q9ULV3 898 aaPredicted RBP15.52■□□□□ 0.08
CPNE1-206ENST00000412056 DNM3Q9UQ16 869 aa15.52■□□□□ 0.08
CPNE1-206ENST00000412056 TRIOBPQ9H2D6 2365 aa15.51■□□□□ 0.07
CPNE1-206ENST00000412056 CD52P31358 61 aa15.51■□□□□ 0.07
CPNE1-206ENST00000412056 PLEKHG4Q58EX7 1191 aa15.51■□□□□ 0.07
CPNE1-206ENST00000412056 AXDND1Q5T1B0 1012 aaPredicted RBP15.51■□□□□ 0.07
CPNE1-206ENST00000412056 TSHZ1Q6ZSZ6 1077 aa15.51■□□□□ 0.07
CPNE1-206ENST00000412056 KSR1Q8IVT5 923 aa15.51■□□□□ 0.07
CPNE1-206ENST00000412056 ASAP3Q8TDY4 903 aa15.51■□□□□ 0.07
CPNE1-206ENST00000412056 LEO1Q8WVC0 666 aaPredicted RBP15.51■□□□□ 0.07
CPNE1-206ENST00000412056 TCP11Q8WWU5 503 aa15.51■□□□□ 0.07
CPNE1-206ENST00000412056 PSPC1Q8WXF1 523 aaKnown RBP15.51■□□□□ 0.07
CPNE1-206ENST00000412056 HERVK_113Q902F9 699 aa15.51■□□□□ 0.07
CPNE1-206ENST00000412056 SPATA32Q96LK8 384 aa15.51■□□□□ 0.07
CPNE1-206ENST00000412056 NLRP4Q96MN2 994 aa15.51■□□□□ 0.07
CPNE1-206ENST00000412056 SCLT1Q96NL6 688 aa15.51■□□□□ 0.07
CPNE1-206ENST00000412056 IFIH1Q9BYX4 1025 aaKnown RBP15.51■□□□□ 0.07
CPNE1-206ENST00000412056 POLR3FQ9H1D9 316 aaPredicted RBP15.51■□□□□ 0.07
CPNE1-206ENST00000412056 GPRC5CQ9NQ84 441 aa15.51■□□□□ 0.07
CPNE1-206ENST00000412056 BLOC1S4Q9NUP1 217 aa15.51■□□□□ 0.07
CPNE1-206ENST00000412056 CXXC1Q9P0U4 656 aaPredicted RBP15.51■□□□□ 0.07
CPNE1-206ENST00000412056 PCDHA7Q9UN72 937 aa15.51■□□□□ 0.07
CPNE1-206ENST00000412056 COL4A3BPQ9Y5P4 624 aa15.51■□□□□ 0.07
CPNE1-206ENST00000412056 A0A087WZ62 844 aa15.5■□□□□ 0.07
CPNE1-206ENST00000412056 A0A087X0B3 334 aa15.5■□□□□ 0.07
CPNE1-206ENST00000412056 ZBBXA8MT70 800 aa15.5■□□□□ 0.07
CPNE1-206ENST00000412056 SSBP05455 408 aaKnown RBP eCLIP15.5■□□□□ 0.07
CPNE1-206ENST00000412056 ACTN1P12814 892 aa15.5■□□□□ 0.07
CPNE1-206ENST00000412056 CYP11B2P19099 503 aa15.5■□□□□ 0.07
CPNE1-206ENST00000412056 TXLNAP40222 546 aa15.5■□□□□ 0.07
CPNE1-206ENST00000412056 ME1P48163 572 aa15.5■□□□□ 0.07
CPNE1-206ENST00000412056 CRYBB1P53674 252 aaPredicted RBP15.5■□□□□ 0.07
CPNE1-206ENST00000412056 LAMTOR4Q0VGL1 99 aa15.5■□□□□ 0.07
CPNE1-206ENST00000412056 RASIP1Q5U651 963 aa15.5■□□□□ 0.07
CPNE1-206ENST00000412056 SHC4Q6S5L8 630 aa15.5■□□□□ 0.07
CPNE1-206ENST00000412056 MCPH1Q8NEM0 835 aa15.5■□□□□ 0.07
CPNE1-206ENST00000412056 PRPF31Q8WWY3 499 aaKnown RBP15.5■□□□□ 0.07
CPNE1-206ENST00000412056 NLRP7Q8WX94 980 aa15.5■□□□□ 0.07
CPNE1-206ENST00000412056 SEPT8Q92599 483 aa15.5■□□□□ 0.07
CPNE1-206ENST00000412056 FDXACB1Q9BRP7 624 aaPredicted RBP15.5■□□□□ 0.07
CPNE1-206ENST00000412056 RUSC1Q9BVN2 902 aa15.5■□□□□ 0.07
CPNE1-206ENST00000412056 GDPD2Q9HCC8 539 aa15.5■□□□□ 0.07
CPNE1-206ENST00000412056 NOC2LQ9Y3T9 749 aaKnown RBP15.5■□□□□ 0.07
CPNE1-206ENST00000412056 SQORQ9Y6N5 450 aa15.5■□□□□ 0.07
CPNE1-206ENST00000412056 A0A1W2PPC1 479 aa15.49■□□□□ 0.07
CPNE1-206ENST00000412056 PLA2G4BP0C869 781 aa15.49■□□□□ 0.07
CPNE1-206ENST00000412056 DARSP14868 501 aaKnown RBP15.49■□□□□ 0.07
CPNE1-206ENST00000412056 ARL2P36404 184 aa15.49■□□□□ 0.07
CPNE1-206ENST00000412056 SLC12A3P55017 1021 aa15.49■□□□□ 0.07
CPNE1-206ENST00000412056 MCM6Q14566 821 aa15.49■□□□□ 0.07
CPNE1-206ENST00000412056 FAM102BQ5T8I3 360 aa15.49■□□□□ 0.07
CPNE1-206ENST00000412056 RINT1Q6NUQ1 792 aa15.49■□□□□ 0.07
CPNE1-206ENST00000412056 ZNF410Q86VK4 478 aa15.49■□□□□ 0.07
CPNE1-206ENST00000412056 FAM228AQ86W67 206 aa15.49■□□□□ 0.07
CPNE1-206ENST00000412056 KCTD17Q8N5Z5 321 aa15.49■□□□□ 0.07
CPNE1-206ENST00000412056 SYT2Q8N9I0 419 aaPredicted RBP15.49■□□□□ 0.07
CPNE1-206ENST00000412056 USP38Q8NB14 1042 aa15.49■□□□□ 0.07
CPNE1-206ENST00000412056 RAD54LQ92698 747 aa15.49■□□□□ 0.07
CPNE1-206ENST00000412056 POLD4Q9HCU8 107 aa15.49■□□□□ 0.07
CPNE1-206ENST00000412056 ERVK-5Q9HDB9 667 aa15.49■□□□□ 0.07
CPNE1-206ENST00000412056 CCDC39Q9UFE4 941 aa15.49■□□□□ 0.07
CPNE1-206ENST00000412056 TTC3P53804 2025 aa15.49■□□□□ 0.07
CPNE1-206ENST00000412056 CSDE1O75534 798 aaKnown RBP15.48■□□□□ 0.07
CPNE1-206ENST00000412056 RPS6KA5O75582 802 aa15.48■□□□□ 0.07
CPNE1-206ENST00000412056 BAIAP3O94812 1187 aa15.48■□□□□ 0.07
CPNE1-206ENST00000412056 FGFR4P22455 802 aa15.48■□□□□ 0.07
CPNE1-206ENST00000412056 GLRA2P23416 452 aa15.48■□□□□ 0.07
CPNE1-206ENST00000412056 PAK2Q13177 524 aa15.48■□□□□ 0.07
CPNE1-206ENST00000412056 CAPSQ13938 189 aa15.48■□□□□ 0.07
CPNE1-206ENST00000412056 DHX8Q14562 1220 aaKnown RBP15.48■□□□□ 0.07
CPNE1-206ENST00000412056 C1orf186Q6ZWK4 172 aa15.48■□□□□ 0.07
CPNE1-206ENST00000412056 ZNF710Q8N1W2 664 aa15.48■□□□□ 0.07
CPNE1-206ENST00000412056 PDILTQ8N807 584 aa15.48■□□□□ 0.07
CPNE1-206ENST00000412056 RNF149Q8NC42 400 aa15.48■□□□□ 0.07
CPNE1-206ENST00000412056 BSNDQ8WZ55 320 aa15.48■□□□□ 0.07
CPNE1-206ENST00000412056 LARP4BQ92615 738 aaKnown RBP15.48■□□□□ 0.07
CPNE1-206ENST00000412056 APBB2Q92870 758 aa15.48■□□□□ 0.07
CPNE1-206ENST00000412056 PANK2Q9BZ23 570 aa15.48■□□□□ 0.07
CPNE1-206ENST00000412056 GCOM2Q9BZD3 368 aaPredicted RBP15.48■□□□□ 0.07
CPNE1-206ENST00000412056 MTIF3Q9H2K0 278 aaKnown RBP15.48■□□□□ 0.07
CPNE1-206ENST00000412056 CHMP5Q9NZZ3 219 aa15.48■□□□□ 0.07
CPNE1-206ENST00000412056 STK17AQ9UEE5 414 aa15.48■□□□□ 0.07
CPNE1-206ENST00000412056 PADI3Q9ULW8 664 aa15.48■□□□□ 0.07
CPNE1-206ENST00000412056 ABHD14A-ACY1A0A1B0GW23 586 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms