RNA–Protein interactions for RNA: ENST00000411913.1

HMGB3P2-201, Transcript of high mobility group box 3 pseudogene 2, humanhuman

BASIC

Gene HMGB3P2, Length 584 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P2-201ENST00000411913 SRGAP2CP0DJJ0 459 aa3.83□□□□□ -1.8
HMGB3P2-201ENST00000411913 APEX1P27695 318 aaKnown RBP3.83□□□□□ -1.8
HMGB3P2-201ENST00000411913 RABGGTBP53611 331 aa3.83□□□□□ -1.8
HMGB3P2-201ENST00000411913 TIGD2Q4W5G0 525 aa3.83□□□□□ -1.8
HMGB3P2-201ENST00000411913 MFSD5Q6N075 450 aa3.83□□□□□ -1.8
HMGB3P2-201ENST00000411913 LRRC55Q6ZSA7 311 aa3.83□□□□□ -1.8
HMGB3P2-201ENST00000411913 MAMDC2Q7Z304 686 aaPredicted RBP3.83□□□□□ -1.8
HMGB3P2-201ENST00000411913 RD3Q7Z3Z2 195 aa3.83□□□□□ -1.8
HMGB3P2-201ENST00000411913 ELOA2Q8IYF1 753 aaPredicted RBP3.83□□□□□ -1.8
HMGB3P2-201ENST00000411913 PCDH19Q8TAB3 1148 aa3.83□□□□□ -1.8
HMGB3P2-201ENST00000411913 GFM2Q969S9 779 aaKnown RBP3.83□□□□□ -1.8
HMGB3P2-201ENST00000411913 FAM193BQ96PV7 902 aaPredicted RBP3.83□□□□□ -1.8
HMGB3P2-201ENST00000411913 GPHA2Q96T91 129 aa3.83□□□□□ -1.8
HMGB3P2-201ENST00000411913 INO80BQ9C086 356 aaPredicted RBP3.83□□□□□ -1.8
HMGB3P2-201ENST00000411913 RCAN3Q9UKA8 241 aa3.83□□□□□ -1.8
HMGB3P2-201ENST00000411913 CBLCQ9ULV8 474 aa3.83□□□□□ -1.8
HMGB3P2-201ENST00000411913 PCDHA8Q9Y5H6 950 aa3.83□□□□□ -1.8
HMGB3P2-201ENST00000411913 WNT9AO14904 365 aa3.82□□□□□ -1.8
HMGB3P2-201ENST00000411913 IPO13O94829 963 aaKnown RBP3.82□□□□□ -1.8
HMGB3P2-201ENST00000411913 DNM2P50570 870 aa3.82□□□□□ -1.8
HMGB3P2-201ENST00000411913 GUCY1A3Q02108 690 aa3.82□□□□□ -1.8
HMGB3P2-201ENST00000411913 TCIRG1Q13488 830 aa3.82□□□□□ -1.8
HMGB3P2-201ENST00000411913 FAM47CQ5HY64 1035 aa3.82□□□□□ -1.8
HMGB3P2-201ENST00000411913 ZNF362Q5T0B9 420 aaPredicted RBP3.82□□□□□ -1.8
HMGB3P2-201ENST00000411913 YOD1Q5VVQ6 348 aaPredicted RBP3.82□□□□□ -1.8
HMGB3P2-201ENST00000411913 PAPD7Q5XG87 772 aaKnown RBP3.82□□□□□ -1.8
HMGB3P2-201ENST00000411913 BEND2Q8NDZ0 799 aa3.82□□□□□ -1.8
HMGB3P2-201ENST00000411913 CPT1CQ8TCG5 803 aa3.82□□□□□ -1.8
HMGB3P2-201ENST00000411913 ASB15Q8WXK1 588 aa3.82□□□□□ -1.8
HMGB3P2-201ENST00000411913 ARL8AQ96BM9 186 aa3.82□□□□□ -1.8
HMGB3P2-201ENST00000411913 SYNPO2LQ9H987 977 aa3.82□□□□□ -1.8
HMGB3P2-201ENST00000411913 RSAD1Q9HA92 442 aa3.82□□□□□ -1.8
HMGB3P2-201ENST00000411913 IL23AQ9NPF7 189 aa3.82□□□□□ -1.8
HMGB3P2-201ENST00000411913 SAE1Q9UBE0 346 aaPredicted RBP3.82□□□□□ -1.8
HMGB3P2-201ENST00000411913 SORCS3Q9UPU3 1222 aa3.82□□□□□ -1.8
HMGB3P2-201ENST00000411913 SPATA31A6Q5VVP1 1343 aa3.81□□□□□ -1.8
HMGB3P2-201ENST00000411913 C2orf78A6NCI8 922 aa3.81□□□□□ -1.8
HMGB3P2-201ENST00000411913 ZNF561-AS1K7EIQ3 104 aa3.81□□□□□ -1.8
HMGB3P2-201ENST00000411913 SCDO00767 359 aa3.81□□□□□ -1.8
HMGB3P2-201ENST00000411913 FOXP2O15409 715 aa3.81□□□□□ -1.8
HMGB3P2-201ENST00000411913 NR4A1P22736 598 aa3.81□□□□□ -1.8
HMGB3P2-201ENST00000411913 USP14P54578 494 aa3.81□□□□□ -1.8
HMGB3P2-201ENST00000411913 SEC23AQ15436 765 aa3.81□□□□□ -1.8
HMGB3P2-201ENST00000411913 NBPF6Q5VWK0 638 aa3.81□□□□□ -1.8
HMGB3P2-201ENST00000411913 KRT40Q6A162 431 aa3.81□□□□□ -1.8
HMGB3P2-201ENST00000411913 SUPT20HQ8NEM7 779 aa3.81□□□□□ -1.8
HMGB3P2-201ENST00000411913 NBPF4Q96M43 638 aa3.81□□□□□ -1.8
HMGB3P2-201ENST00000411913 BUD13Q9BRD0 619 aaKnown RBP eCLIP3.81□□□□□ -1.8
HMGB3P2-201ENST00000411913 MAGEL2Q9UJ55 1249 aa3.81□□□□□ -1.8
HMGB3P2-201ENST00000411913 DENND2AQ9ULE3 1009 aa3.81□□□□□ -1.8
HMGB3P2-201ENST00000411913 COX11Q9Y6N1 276 aa3.81□□□□□ -1.8
HMGB3P2-201ENST00000411913 COL4A3Q01955 1670 aa3.81□□□□□ -1.8
HMGB3P2-201ENST00000411913 CCDC66A2RUB6 948 aa3.8□□□□□ -1.8
HMGB3P2-201ENST00000411913 RECQL4O94761 1208 aa3.8□□□□□ -1.8
HMGB3P2-201ENST00000411913 SCAF4O95104 1147 aaKnown RBP3.8□□□□□ -1.8
HMGB3P2-201ENST00000411913 NAT1P18440 290 aa3.8□□□□□ -1.8
HMGB3P2-201ENST00000411913 TAP1Q03518 808 aa3.8□□□□□ -1.8
HMGB3P2-201ENST00000411913 PLEKHG4Q58EX7 1191 aa3.8□□□□□ -1.8
HMGB3P2-201ENST00000411913 HDGFL2Q7Z4V5 671 aaPredicted RBP3.8□□□□□ -1.8
HMGB3P2-201ENST00000411913 BCL6BQ8N143 479 aaPredicted RBP3.8□□□□□ -1.8
HMGB3P2-201ENST00000411913 LRRC47Q8N1G4 583 aaKnown RBP3.8□□□□□ -1.8
HMGB3P2-201ENST00000411913 ERCC4Q92889 916 aaPredicted RBP3.8□□□□□ -1.8
HMGB3P2-201ENST00000411913 C8orf37Q96NL8 207 aa3.8□□□□□ -1.8
HMGB3P2-201ENST00000411913 SMURF1Q9HCE7 757 aa3.8□□□□□ -1.8
HMGB3P2-201ENST00000411913 KCNH7Q9NS40 1196 aa3.8□□□□□ -1.8
HMGB3P2-201ENST00000411913 NCDNQ9UBB6 729 aa3.8□□□□□ -1.8
HMGB3P2-201ENST00000411913 ASB1Q9Y576 335 aa3.8□□□□□ -1.8
HMGB3P2-201ENST00000411913 HS3ST4Q9Y661 456 aa3.8□□□□□ -1.8
HMGB3P2-201ENST00000411913 LAG3P18627 525 aa3.79□□□□□ -1.8
HMGB3P2-201ENST00000411913 GNAT2P19087 354 aa3.79□□□□□ -1.8
HMGB3P2-201ENST00000411913 CLK3P49761 638 aaKnown RBP3.79□□□□□ -1.8
HMGB3P2-201ENST00000411913 TMEM132BQ14DG7 1078 aa3.79□□□□□ -1.8
HMGB3P2-201ENST00000411913 GAGE13Q4V321 117 aa3.79□□□□□ -1.8
HMGB3P2-201ENST00000411913 FBXO42Q6P3S6 717 aa3.79□□□□□ -1.8
HMGB3P2-201ENST00000411913 HTR3DQ70Z44 454 aa3.79□□□□□ -1.8
HMGB3P2-201ENST00000411913 ZC3H7AQ8IWR0 971 aaKnown RBP3.79□□□□□ -1.8
HMGB3P2-201ENST00000411913 CELF2-AS1Q8N7Q2 184 aa3.79□□□□□ -1.8
HMGB3P2-201ENST00000411913 MDGA1Q8NFP4 955 aa3.79□□□□□ -1.8
HMGB3P2-201ENST00000411913 PTPRN2Q92932 1015 aa3.79□□□□□ -1.8
HMGB3P2-201ENST00000411913 C16orf92Q96LL3 132 aa3.79□□□□□ -1.8
HMGB3P2-201ENST00000411913 ZNF512Q96ME7 567 aaPredicted RBP3.79□□□□□ -1.8
HMGB3P2-201ENST00000411913 ZNF408Q9H9D4 720 aa3.79□□□□□ -1.8
HMGB3P2-201ENST00000411913 SFMBT1Q9UHJ3 866 aa3.79□□□□□ -1.8
HMGB3P2-201ENST00000411913 GRXCR1A8MXD5 290 aa3.78□□□□□ -1.8
HMGB3P2-201ENST00000411913 GOLGA6L22H0YM25 854 aa3.78□□□□□ -1.8
HMGB3P2-201ENST00000411913 ARVCFO00192 962 aa3.78□□□□□ -1.8
HMGB3P2-201ENST00000411913 MAFO75444 373 aaPredicted RBP3.78□□□□□ -1.8
HMGB3P2-201ENST00000411913 GYPEP15421 78 aa3.78□□□□□ -1.8
HMGB3P2-201ENST00000411913 HK1P19367 917 aa3.78□□□□□ -1.8
HMGB3P2-201ENST00000411913 ERCC5P28715 1186 aaPredicted RBP3.78□□□□□ -1.8
HMGB3P2-201ENST00000411913 ADAM8P78325 824 aa3.78□□□□□ -1.8
HMGB3P2-201ENST00000411913 LACTBP83111 547 aaPredicted RBP3.78□□□□□ -1.8
HMGB3P2-201ENST00000411913 DDR2Q16832 855 aa3.78□□□□□ -1.8
HMGB3P2-201ENST00000411913 C1QL3Q5VWW1 255 aa3.78□□□□□ -1.8
HMGB3P2-201ENST00000411913 LCORLQ8N3X6 602 aa3.78□□□□□ -1.8
HMGB3P2-201ENST00000411913 CISD2Q8N5K1 135 aaKnown RBP3.78□□□□□ -1.8
HMGB3P2-201ENST00000411913 HNRNPLLQ8WVV9 542 aaKnown RBP3.78□□□□□ -1.8
HMGB3P2-201ENST00000411913 ST8SIA2Q92186 375 aa3.78□□□□□ -1.8
HMGB3P2-201ENST00000411913 IPO9Q96P70 1041 aaKnown RBP3.78□□□□□ -1.8
HMGB3P2-201ENST00000411913 CDC6Q99741 560 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms