RNA–Protein interactions for RNA: ENST00000411092.1

RNU6-55P-201, Transcript of RNA, U6 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU6-55P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-55P-201ENST00000411092 RAB11FIP3O75154 756 aa4.17□□□□□ -1.74
RNU6-55P-201ENST00000411092 CAVIN2O95810 425 aa4.17□□□□□ -1.74
RNU6-55P-201ENST00000411092 PTMAP06454 111 aaKnown RBP4.17□□□□□ -1.74
RNU6-55P-201ENST00000411092 HMOX1P09601 288 aa4.17□□□□□ -1.74
RNU6-55P-201ENST00000411092 FGRP09769 529 aa4.17□□□□□ -1.74
RNU6-55P-201ENST00000411092 TCF3P15923 654 aa4.17□□□□□ -1.74
RNU6-55P-201ENST00000411092 MX1P20591 662 aa4.17□□□□□ -1.74
RNU6-55P-201ENST00000411092 GRIA2P42262 883 aa4.17□□□□□ -1.74
RNU6-55P-201ENST00000411092 NEK4P51957 841 aa4.17□□□□□ -1.74
RNU6-55P-201ENST00000411092 UBE2HP62256 183 aa4.17□□□□□ -1.74
RNU6-55P-201ENST00000411092 NKX3-2P78367 333 aa4.17□□□□□ -1.74
RNU6-55P-201ENST00000411092 CHAF1AQ13111 956 aaPredicted RBP4.17□□□□□ -1.74
RNU6-55P-201ENST00000411092 ADAM9Q13443 819 aa4.17□□□□□ -1.74
RNU6-55P-201ENST00000411092 SAFB2Q14151 953 aaKnown RBP eCLIP4.17□□□□□ -1.74
RNU6-55P-201ENST00000411092 TESK1Q15569 626 aa4.17□□□□□ -1.74
RNU6-55P-201ENST00000411092 CHRNA2Q15822 529 aa4.17□□□□□ -1.74
RNU6-55P-201ENST00000411092 ZXDCQ2QGD7 858 aaPredicted RBP4.17□□□□□ -1.74
RNU6-55P-201ENST00000411092 SLC10A6Q3KNW5 377 aa4.17□□□□□ -1.74
RNU6-55P-201ENST00000411092 EEPD1Q7L9B9 569 aa4.17□□□□□ -1.74
RNU6-55P-201ENST00000411092 TXNDC5Q8NBS9 432 aaKnown RBP4.17□□□□□ -1.74
RNU6-55P-201ENST00000411092 ARRDC4Q8NCT1 418 aa4.17□□□□□ -1.74
RNU6-55P-201ENST00000411092 C1orf159Q96HA4 380 aa4.17□□□□□ -1.74
RNU6-55P-201ENST00000411092 RBM15Q96T37 977 aaKnown RBP eCLIP4.17□□□□□ -1.74
RNU6-55P-201ENST00000411092 CCDC94Q9BW85 323 aaPredicted RBP4.17□□□□□ -1.74
RNU6-55P-201ENST00000411092 STK31Q9BXU1 1019 aa4.17□□□□□ -1.74
RNU6-55P-201ENST00000411092 LRRCC1Q9C099 1032 aa4.17□□□□□ -1.74
RNU6-55P-201ENST00000411092 NGRNQ9NPE2 291 aaKnown RBP4.17□□□□□ -1.74
RNU6-55P-201ENST00000411092 DIAPH3Q9NSV4 1193 aa4.17□□□□□ -1.74
RNU6-55P-201ENST00000411092 SPTLC3Q9NUV7 552 aa4.17□□□□□ -1.74
RNU6-55P-201ENST00000411092 CLDND1Q9NY35 253 aa4.17□□□□□ -1.74
RNU6-55P-201ENST00000411092 STK26Q9P289 416 aa4.17□□□□□ -1.74
RNU6-55P-201ENST00000411092 CNOT11Q9UKZ1 510 aaKnown RBP4.17□□□□□ -1.74
RNU6-55P-201ENST00000411092 HDAC5Q9UQL6 1122 aa4.17□□□□□ -1.74
RNU6-55P-201ENST00000411092 ZNF652Q9Y2D9 606 aa4.17□□□□□ -1.74
RNU6-55P-201ENST00000411092 R3HCC1Q9Y3T6 440 aaKnown RBP4.17□□□□□ -1.74
RNU6-55P-201ENST00000411092 ADGRL3Q9HAR2 1447 aa4.17□□□□□ -1.74
RNU6-55P-201ENST00000411092 PEAK1Q9H792 1746 aa4.17□□□□□ -1.74
RNU6-55P-201ENST00000411092 RAD50Q92878 1312 aa4.17□□□□□ -1.74
RNU6-55P-201ENST00000411092 SBNO1A3KN83 1393 aa4.16□□□□□ -1.74
RNU6-55P-201ENST00000411092 FLT4P35916 1363 aa4.16□□□□□ -1.74
RNU6-55P-201ENST00000411092 MAP3K5Q99683 1374 aa4.16□□□□□ -1.74
RNU6-55P-201ENST00000411092 RPAP1Q9BWH6 1393 aaPredicted RBP4.16□□□□□ -1.74
RNU6-55P-201ENST00000411092 CEP170BQ9Y4F5 1589 aaPredicted RBP4.16□□□□□ -1.74
RNU6-55P-201ENST00000411092 USP6P35125 1406 aa4.16□□□□□ -1.74
RNU6-55P-201ENST00000411092 TCRBV5S2A0A599 114 aa4.16□□□□□ -1.74
RNU6-55P-201ENST00000411092 MROH6A6NGR9 719 aa4.16□□□□□ -1.74
RNU6-55P-201ENST00000411092 AGRPO00253 132 aa4.16□□□□□ -1.74
RNU6-55P-201ENST00000411092 TADA3O75528 432 aa4.16□□□□□ -1.74
RNU6-55P-201ENST00000411092 CAPNS1P04632 268 aa4.16□□□□□ -1.74
RNU6-55P-201ENST00000411092 ITGB3P05106 788 aa4.16□□□□□ -1.74
RNU6-55P-201ENST00000411092 HOXB7P09629 217 aa4.16□□□□□ -1.74
RNU6-55P-201ENST00000411092 INSRRP14616 1297 aa4.16□□□□□ -1.74
RNU6-55P-201ENST00000411092 CHMLP26374 656 aa4.16□□□□□ -1.74
RNU6-55P-201ENST00000411092 HSPA4P34932 840 aa4.16□□□□□ -1.74
RNU6-55P-201ENST00000411092 PPP2R2AP63151 447 aa4.16□□□□□ -1.74
RNU6-55P-201ENST00000411092 ARID5AQ03989 594 aa4.16□□□□□ -1.74
RNU6-55P-201ENST00000411092 PKP1Q13835 747 aa4.16□□□□□ -1.74
RNU6-55P-201ENST00000411092 SYCP1Q15431 976 aa4.16□□□□□ -1.74
RNU6-55P-201ENST00000411092 ZNF827Q17R98 1081 aa4.16□□□□□ -1.74
RNU6-55P-201ENST00000411092 TBC1D10BQ4KMP7 808 aaPredicted RBP4.16□□□□□ -1.74
RNU6-55P-201ENST00000411092 HSP90AB4PQ58FF6 505 aa4.16□□□□□ -1.74
RNU6-55P-201ENST00000411092 FAM26FQ5R3K3 315 aa4.16□□□□□ -1.74
RNU6-55P-201ENST00000411092 SLC35F1Q5T1Q4 408 aa4.16□□□□□ -1.74
RNU6-55P-201ENST00000411092 CCDC30Q5VVM6 783 aa4.16□□□□□ -1.74
RNU6-55P-201ENST00000411092 STEAP3Q658P3 488 aa4.16□□□□□ -1.74
RNU6-55P-201ENST00000411092 MCF2L2Q86YR7 1114 aa4.16□□□□□ -1.74
RNU6-55P-201ENST00000411092 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.16□□□□□ -1.74
RNU6-55P-201ENST00000411092 LGI4Q8N135 537 aa4.16□□□□□ -1.74
RNU6-55P-201ENST00000411092 ZGPATQ8N5A5 531 aaKnown RBP4.16□□□□□ -1.74
RNU6-55P-201ENST00000411092 HNRNPLLQ8WVV9 542 aaKnown RBP4.16□□□□□ -1.74
RNU6-55P-201ENST00000411092 RTF1Q92541 710 aaKnown RBP4.16□□□□□ -1.74
RNU6-55P-201ENST00000411092 TOE1Q96GM8 510 aaKnown RBP4.16□□□□□ -1.74
RNU6-55P-201ENST00000411092 BORCS6Q96GS4 357 aa4.16□□□□□ -1.74
RNU6-55P-201ENST00000411092 ZSCAN31Q96LW9 406 aaPredicted RBP4.16□□□□□ -1.74
RNU6-55P-201ENST00000411092 ZSWIM3Q96MP5 696 aa4.16□□□□□ -1.74
RNU6-55P-201ENST00000411092 TINF2Q9BSI4 451 aa4.16□□□□□ -1.74
RNU6-55P-201ENST00000411092 THUMPD2Q9BTF0 503 aaKnown RBP4.16□□□□□ -1.74
RNU6-55P-201ENST00000411092 EPN3Q9H201 632 aa4.16□□□□□ -1.74
RNU6-55P-201ENST00000411092 ST7Q9NRC1 585 aa4.16□□□□□ -1.74
RNU6-55P-201ENST00000411092 DTLQ9NZJ0 730 aa4.16□□□□□ -1.74
RNU6-55P-201ENST00000411092 INVSQ9Y283 1065 aa4.16□□□□□ -1.74
RNU6-55P-201ENST00000411092 PCDHB4Q9Y5E5 795 aa4.16□□□□□ -1.74
RNU6-55P-201ENST00000411092 TCHHQ07283 1943 aa4.16□□□□□ -1.74
RNU6-55P-201ENST00000411092 LMTK3Q96Q04 1460 aa4.16□□□□□ -1.74
RNU6-55P-201ENST00000411092 ELP1O95163 1332 aa4.16□□□□□ -1.74
RNU6-55P-201ENST00000411092 TTC41PQ6P2S7 1318 aa4.16□□□□□ -1.74
RNU6-55P-201ENST00000411092 USP42Q9H9J4 1324 aaKnown RBP4.16□□□□□ -1.74
RNU6-55P-201ENST00000411092 SLIT1O75093 1534 aa4.16□□□□□ -1.74
RNU6-55P-201ENST00000411092 UBR1Q8IWV7 1749 aa4.15□□□□□ -1.74
RNU6-55P-201ENST00000411092 MED1Q15648 1581 aaPredicted RBP4.15□□□□□ -1.74
RNU6-55P-201ENST00000411092 OVOS2A0A0G2JMS6 1433 aa4.15□□□□□ -1.74
RNU6-55P-201ENST00000411092 A0A1W2PQU0 124 aa4.15□□□□□ -1.75
RNU6-55P-201ENST00000411092 HIP1O00291 1037 aa4.15□□□□□ -1.75
RNU6-55P-201ENST00000411092 DGKIO75912 1065 aa4.15□□□□□ -1.75
RNU6-55P-201ENST00000411092 KIF20AO95235 890 aa4.15□□□□□ -1.75
RNU6-55P-201ENST00000411092 PLATP00750 562 aa4.15□□□□□ -1.75
RNU6-55P-201ENST00000411092 PDCP20941 246 aa4.15□□□□□ -1.75
RNU6-55P-201ENST00000411092 DNAJA1P31689 397 aaKnown RBP4.15□□□□□ -1.75
RNU6-55P-201ENST00000411092 MAGEA10P43363 369 aaPredicted RBP4.15□□□□□ -1.75
RNU6-55P-201ENST00000411092 ATP8B2P98198 1209 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms