RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 RSPH10BP0C881 870 aa14.86□□□□□ -0.03
LIMS1-205ENST00000410093 PRKCIP41743 596 aa14.86□□□□□ -0.03
LIMS1-205ENST00000410093 POLR2FP61218 127 aaKnown RBP14.86□□□□□ -0.03
LIMS1-205ENST00000410093 UBXN2AP68543 259 aa14.86□□□□□ -0.03
LIMS1-205ENST00000410093 FAM193AP78312 1265 aa14.86□□□□□ -0.03
LIMS1-205ENST00000410093 MRPS9P82933 396 aaKnown RBP14.86□□□□□ -0.03
LIMS1-205ENST00000410093 SLC18A3Q16572 532 aa14.86□□□□□ -0.03
LIMS1-205ENST00000410093 IFI16Q16666 785 aaKnown RBP14.86□□□□□ -0.03
LIMS1-205ENST00000410093 SH3D19Q5HYK7 790 aa14.86□□□□□ -0.03
LIMS1-205ENST00000410093 TEX35Q5T0J7 233 aa14.86□□□□□ -0.03
LIMS1-205ENST00000410093 HGSNATQ68CP4 663 aa14.86□□□□□ -0.03
LIMS1-205ENST00000410093 OTUD6AQ7L8S5 288 aa14.86□□□□□ -0.03
LIMS1-205ENST00000410093 FAM186BQ8IYM0 893 aa14.86□□□□□ -0.03
LIMS1-205ENST00000410093 NSUN6Q8TEA1 469 aaKnown RBP14.86□□□□□ -0.03
LIMS1-205ENST00000410093 BORCS6Q96GS4 357 aa14.86□□□□□ -0.03
LIMS1-205ENST00000410093 WRNIP1Q96S55 665 aa14.86□□□□□ -0.03
LIMS1-205ENST00000410093 RNF146Q9NTX7 359 aa14.86□□□□□ -0.03
LIMS1-205ENST00000410093 FAM53CQ9NYF3 392 aa14.86□□□□□ -0.03
LIMS1-205ENST00000410093 RNF14Q9UBS8 474 aa14.86□□□□□ -0.03
LIMS1-205ENST00000410093 NFASCO94856 1347 aa14.85□□□□□ -0.03
LIMS1-205ENST00000410093 P4HA2O15460 535 aa14.85□□□□□ -0.03
LIMS1-205ENST00000410093 PLS3P13797 630 aa14.85□□□□□ -0.03
LIMS1-205ENST00000410093 TCP1P17987 556 aaKnown RBP14.85□□□□□ -0.03
LIMS1-205ENST00000410093 RARRES1P49788 294 aa14.85□□□□□ -0.03
LIMS1-205ENST00000410093 CLCN6P51797 869 aa14.85□□□□□ -0.03
LIMS1-205ENST00000410093 ENPEPQ07075 957 aa14.85□□□□□ -0.03
LIMS1-205ENST00000410093 CETN1Q12798 172 aa14.85□□□□□ -0.03
LIMS1-205ENST00000410093 TDRD12Q587J7 1177 aaKnown RBP14.85□□□□□ -0.03
LIMS1-205ENST00000410093 MUM1L1Q5H9M0 696 aa14.85□□□□□ -0.03
LIMS1-205ENST00000410093 KLHDC7AQ5VTJ3 777 aa14.85□□□□□ -0.03
LIMS1-205ENST00000410093 SAMD1Q6SPF0 538 aaPredicted RBP14.85□□□□□ -0.03
LIMS1-205ENST00000410093 VSIG10LQ86VR7 867 aa14.85□□□□□ -0.03
LIMS1-205ENST00000410093 KRT222Q8N1A0 295 aa14.85□□□□□ -0.03
LIMS1-205ENST00000410093 MSL3Q8N5Y2 521 aaKnown RBP14.85□□□□□ -0.03
LIMS1-205ENST00000410093 REPS2Q8NFH8 660 aa14.85□□□□□ -0.03
LIMS1-205ENST00000410093 SLC35C1Q96A29 364 aa14.85□□□□□ -0.03
LIMS1-205ENST00000410093 NOX5Q96PH1 765 aa14.85□□□□□ -0.03
LIMS1-205ENST00000410093 ACCSQ96QU6 501 aa14.85□□□□□ -0.03
LIMS1-205ENST00000410093 TAAR1Q96RJ0 339 aa14.85□□□□□ -0.03
LIMS1-205ENST00000410093 FIZ1Q96SL8 496 aa14.85□□□□□ -0.03
LIMS1-205ENST00000410093 TEX13BQ9BXU2 312 aa14.85□□□□□ -0.03
LIMS1-205ENST00000410093 ARFGAP3Q9NP61 516 aa14.85□□□□□ -0.03
LIMS1-205ENST00000410093 RAB21Q9UL25 225 aa14.85□□□□□ -0.03
LIMS1-205ENST00000410093 EXOC7Q9UPT5 735 aa14.85□□□□□ -0.03
LIMS1-205ENST00000410093 ZHX2Q9Y6X8 837 aa14.85□□□□□ -0.03
LIMS1-205ENST00000410093 WDR81Q562E7 1941 aa14.84□□□□□ -0.03
LIMS1-205ENST00000410093 A0A0U1RQJ8 604 aa14.84□□□□□ -0.03
LIMS1-205ENST00000410093 NKRFO15226 690 aaKnown RBP eCLIP14.84□□□□□ -0.03
LIMS1-205ENST00000410093 HIP1RO75146 1068 aa14.84□□□□□ -0.03
LIMS1-205ENST00000410093 UCHL3P15374 230 aa14.84□□□□□ -0.03
LIMS1-205ENST00000410093 FERP16591 822 aa14.84□□□□□ -0.03
LIMS1-205ENST00000410093 PON1P27169 355 aa14.84□□□□□ -0.03
LIMS1-205ENST00000410093 MCCD1P59942 119 aaPredicted RBP14.84□□□□□ -0.03
LIMS1-205ENST00000410093 KLHL30Q0D2K2 578 aa14.84□□□□□ -0.03
LIMS1-205ENST00000410093 PRKG1Q13976 671 aa14.84□□□□□ -0.03
LIMS1-205ENST00000410093 CCDC70Q6NSX1 233 aa14.84□□□□□ -0.03
LIMS1-205ENST00000410093 CATSPERGQ6ZRH7 1159 aa14.84□□□□□ -0.03
LIMS1-205ENST00000410093 REM2Q8IYK8 340 aaPredicted RBP14.84□□□□□ -0.03
LIMS1-205ENST00000410093 UBE2Q2Q8WVN8 375 aa14.84□□□□□ -0.03
LIMS1-205ENST00000410093 ATRIPQ8WXE1 791 aa14.84□□□□□ -0.03
LIMS1-205ENST00000410093 SPAG5Q96R06 1193 aa14.84□□□□□ -0.03
LIMS1-205ENST00000410093 LACRTQ9GZZ8 138 aa14.84□□□□□ -0.03
LIMS1-205ENST00000410093 ACAD9Q9H845 621 aa14.84□□□□□ -0.03
LIMS1-205ENST00000410093 AGPAT3Q9NRZ7 376 aa14.84□□□□□ -0.03
LIMS1-205ENST00000410093 INTUQ9ULD6 942 aa14.84□□□□□ -0.03
LIMS1-205ENST00000410093 SAMM50Q9Y512 469 aa14.84□□□□□ -0.03
LIMS1-205ENST00000410093 ZMYM2Q9UBW7 1377 aa14.84□□□□□ -0.03
LIMS1-205ENST00000410093 TARSL2A2RTX5 802 aaKnown RBP14.83□□□□□ -0.04
LIMS1-205ENST00000410093 H0YCG3 227 aa14.83□□□□□ -0.04
LIMS1-205ENST00000410093 ZNF263O14978 683 aa14.83□□□□□ -0.04
LIMS1-205ENST00000410093 PMM2O15305 246 aa14.83□□□□□ -0.04
LIMS1-205ENST00000410093 ZRANB2O95218 330 aaKnown RBP eCLIP14.83□□□□□ -0.04
LIMS1-205ENST00000410093 SLC10A3P09131 477 aa14.83□□□□□ -0.04
LIMS1-205ENST00000410093 HSPA8P11142 646 aaKnown RBP14.83□□□□□ -0.04
LIMS1-205ENST00000410093 NMT1P30419 496 aaKnown RBP14.83□□□□□ -0.04
LIMS1-205ENST00000410093 YWHABP31946 246 aaKnown RBP14.83□□□□□ -0.04
LIMS1-205ENST00000410093 MAPK7Q13164 816 aa14.83□□□□□ -0.04
LIMS1-205ENST00000410093 ITGB3BPQ13352 177 aaPredicted RBP14.83□□□□□ -0.04
LIMS1-205ENST00000410093 GNPTABQ3T906 1256 aa14.83□□□□□ -0.04
LIMS1-205ENST00000410093 INTS8Q75QN2 995 aaKnown RBP14.83□□□□□ -0.04
LIMS1-205ENST00000410093 ZNF572Q7Z3I7 529 aaPredicted RBP14.83□□□□□ -0.04
LIMS1-205ENST00000410093 SYCP3Q8IZU3 236 aa14.83□□□□□ -0.04
LIMS1-205ENST00000410093 LRRN4CLQ8ND94 238 aa14.83□□□□□ -0.04
LIMS1-205ENST00000410093 BANK1Q8NDB2 785 aa14.83□□□□□ -0.04
LIMS1-205ENST00000410093 CHST13Q8NET6 341 aa14.83□□□□□ -0.04
LIMS1-205ENST00000410093 ATP6V0A1Q93050 837 aa14.83□□□□□ -0.04
LIMS1-205ENST00000410093 CALR3Q96L12 384 aaKnown RBP14.83□□□□□ -0.04
LIMS1-205ENST00000410093 INPP4AQ96PE3 977 aaPredicted RBP14.83□□□□□ -0.04
LIMS1-205ENST00000410093 MOV10L1Q9BXT6 1211 aaKnown RBP14.83□□□□□ -0.04
LIMS1-205ENST00000410093 NLRC4Q9NPP4 1024 aa14.83□□□□□ -0.04
LIMS1-205ENST00000410093 PCDHA10Q9Y5I2 948 aa14.83□□□□□ -0.04
LIMS1-205ENST00000410093 KRT13P13646 458 aa14.82□□□□□ -0.04
LIMS1-205ENST00000410093 EIF2AK2P19525 551 aaKnown RBP14.82□□□□□ -0.04
LIMS1-205ENST00000410093 SMTNP53814 917 aa14.82□□□□□ -0.04
LIMS1-205ENST00000410093 RTP1P59025 263 aa14.82□□□□□ -0.04
LIMS1-205ENST00000410093 GTF2BQ00403 316 aa14.82□□□□□ -0.04
LIMS1-205ENST00000410093 CYP27A1Q02318 531 aa14.82□□□□□ -0.04
LIMS1-205ENST00000410093 RAPGEF1Q13905 1077 aa14.82□□□□□ -0.04
LIMS1-205ENST00000410093 DCAF17Q5H9S7 520 aaPredicted RBP14.82□□□□□ -0.04
LIMS1-205ENST00000410093 TCERG1LQ5VWI1 586 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms