RNA–Protein interactions for RNA: ENST00000409886.3

RGPD3-202, Transcript of RANBP2-like and GRIP domain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RGPD3, Length 5,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3-202ENST00000409886 ELNP15502 786 aa3.46□□□□□ -1.86
RGPD3-202ENST00000409886 USP11P51784 963 aa3.46□□□□□ -1.86
RGPD3-202ENST00000409886 USP14P54578 494 aa3.46□□□□□ -1.86
RGPD3-202ENST00000409886 HAUS3Q68CZ6 603 aa3.46□□□□□ -1.86
RGPD3-202ENST00000409886 MFSD5Q6N075 450 aa3.46□□□□□ -1.86
RGPD3-202ENST00000409886 HFE2Q6ZVN8 426 aa3.46□□□□□ -1.86
RGPD3-202ENST00000409886 FITM2Q8N6M3 262 aa3.46□□□□□ -1.86
RGPD3-202ENST00000409886 CRACR2AQ9BSW2 395 aa3.46□□□□□ -1.86
RGPD3-202ENST00000409886 CSRNP2Q9H175 543 aa3.46□□□□□ -1.86
RGPD3-202ENST00000409886 SLC40A1Q9NP59 571 aa3.46□□□□□ -1.86
RGPD3-202ENST00000409886 IL23AQ9NPF7 189 aa3.46□□□□□ -1.86
RGPD3-202ENST00000409886 NFU1Q9UMS0 254 aa3.46□□□□□ -1.86
RGPD3-202ENST00000409886 COL7A1Q02388 2944 aa3.46□□□□□ -1.86
RGPD3-202ENST00000409886 TRIM43BA6NCK2 446 aa3.45□□□□□ -1.86
RGPD3-202ENST00000409886 TAF4O00268 1085 aa3.45□□□□□ -1.86
RGPD3-202ENST00000409886 EIF3HO15372 352 aaKnown RBP eCLIP3.45□□□□□ -1.86
RGPD3-202ENST00000409886 ARHGAP6O43182 974 aa3.45□□□□□ -1.86
RGPD3-202ENST00000409886 MFAP3LO75121 409 aa3.45□□□□□ -1.86
RGPD3-202ENST00000409886 NTRK1P04629 796 aa3.45□□□□□ -1.86
RGPD3-202ENST00000409886 KLRC1P26715 233 aa3.45□□□□□ -1.86
RGPD3-202ENST00000409886 RPL10P27635 214 aaKnown RBP3.45□□□□□ -1.86
RGPD3-202ENST00000409886 PRCPP42785 496 aa3.45□□□□□ -1.86
RGPD3-202ENST00000409886 ZAP70P43403 619 aa3.45□□□□□ -1.86
RGPD3-202ENST00000409886 NKX3-2P78367 333 aa3.45□□□□□ -1.86
RGPD3-202ENST00000409886 FOXO4P98177 505 aa3.45□□□□□ -1.86
RGPD3-202ENST00000409886 POU5F1Q01860 360 aaKnown RBP3.45□□□□□ -1.86
RGPD3-202ENST00000409886 ASTE1Q2TB18 679 aaPredicted RBP3.45□□□□□ -1.86
RGPD3-202ENST00000409886 MIIPQ5JXC2 388 aa3.45□□□□□ -1.86
RGPD3-202ENST00000409886 MFSD14CQ5VZR4 134 aa3.45□□□□□ -1.86
RGPD3-202ENST00000409886 ANO1Q5XXA6 986 aa3.45□□□□□ -1.86
RGPD3-202ENST00000409886 DSTYKQ6XUX3 929 aa3.45□□□□□ -1.86
RGPD3-202ENST00000409886 SND1Q7KZF4 910 aaKnown RBP eCLIP3.45□□□□□ -1.86
RGPD3-202ENST00000409886 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.45□□□□□ -1.86
RGPD3-202ENST00000409886 CLEC10AQ8IUN9 316 aa3.45□□□□□ -1.86
RGPD3-202ENST00000409886 TMEFF1Q8IYR6 380 aa3.45□□□□□ -1.86
RGPD3-202ENST00000409886 NKD2Q969F2 451 aaPredicted RBP3.45□□□□□ -1.86
RGPD3-202ENST00000409886 TRIM43Q96BQ3 446 aaPredicted RBP3.45□□□□□ -1.86
RGPD3-202ENST00000409886 SAMD11Q96NU1 681 aa3.45□□□□□ -1.86
RGPD3-202ENST00000409886 SRPK1Q96SB4 655 aaKnown RBP3.45□□□□□ -1.86
RGPD3-202ENST00000409886 METTL22Q9BUU2 404 aaPredicted RBP3.45□□□□□ -1.86
RGPD3-202ENST00000409886 GINM1Q9NU53 330 aa3.45□□□□□ -1.86
RGPD3-202ENST00000409886 KANSL3Q9P2N6 904 aa3.45□□□□□ -1.86
RGPD3-202ENST00000409886 AGTPBP1Q9UPW5 1226 aa3.45□□□□□ -1.86
RGPD3-202ENST00000409886 ZNF536O15090 1300 aa3.45□□□□□ -1.86
RGPD3-202ENST00000409886 ZANQ9Y493 2812 aa3.45□□□□□ -1.86
RGPD3-202ENST00000409886 KLF18A0A0U1RQI7 1052 aa3.45□□□□□ -1.86
RGPD3-202ENST00000409886 NEURL1BA8MQ27 555 aa3.45□□□□□ -1.86
RGPD3-202ENST00000409886 GRM8O00222 908 aa3.45□□□□□ -1.86
RGPD3-202ENST00000409886 NRDCO43847 1150 aa3.45□□□□□ -1.86
RGPD3-202ENST00000409886 PCCAP05165 728 aaPredicted RBP3.45□□□□□ -1.86
RGPD3-202ENST00000409886 HOXC6P09630 235 aa3.45□□□□□ -1.86
RGPD3-202ENST00000409886 CDC25BP30305 580 aa3.45□□□□□ -1.86
RGPD3-202ENST00000409886 GUCY2FP51841 1108 aa3.45□□□□□ -1.86
RGPD3-202ENST00000409886 YBX1P67809 324 aaKnown RBP3.45□□□□□ -1.86
RGPD3-202ENST00000409886 CTBSQ01459 385 aa3.45□□□□□ -1.86
RGPD3-202ENST00000409886 CYP4A11Q02928 519 aa3.45□□□□□ -1.86
RGPD3-202ENST00000409886 LMOD3Q0VAK6 560 aa3.45□□□□□ -1.86
RGPD3-202ENST00000409886 TRIM28Q13263 835 aaKnown RBP3.45□□□□□ -1.86
RGPD3-202ENST00000409886 GCKRQ14397 625 aa3.45□□□□□ -1.86
RGPD3-202ENST00000409886 CCDC96Q2M329 555 aa3.45□□□□□ -1.86
RGPD3-202ENST00000409886 CYB5D1Q6P9G0 228 aa3.45□□□□□ -1.86
RGPD3-202ENST00000409886 DHX32Q7L7V1 743 aaKnown RBP3.45□□□□□ -1.86
RGPD3-202ENST00000409886 TMEM199Q8N511 208 aa3.45□□□□□ -1.86
RGPD3-202ENST00000409886 OR8K1Q8NGG5 319 aa3.45□□□□□ -1.86
RGPD3-202ENST00000409886 NRG4Q8WWG1 115 aa3.45□□□□□ -1.86
RGPD3-202ENST00000409886 GLG1Q92896 1179 aa3.45□□□□□ -1.86
RGPD3-202ENST00000409886 FSD1Q9BTV5 496 aa3.45□□□□□ -1.86
RGPD3-202ENST00000409886 UBE2ZQ9H832 354 aaPredicted RBP3.45□□□□□ -1.86
RGPD3-202ENST00000409886 ZNF395Q9H8N7 513 aaPredicted RBP3.45□□□□□ -1.86
RGPD3-202ENST00000409886 SH2B1Q9NRF2 756 aaPredicted RBP3.45□□□□□ -1.86
RGPD3-202ENST00000409886 ABHD10Q9NUJ1 306 aa3.45□□□□□ -1.86
RGPD3-202ENST00000409886 CACNA2D2Q9NY47 1150 aa3.45□□□□□ -1.86
RGPD3-202ENST00000409886 KIAA1522Q9P206 1035 aaPredicted RBP3.45□□□□□ -1.86
RGPD3-202ENST00000409886 CTNNAL1Q9UBT7 734 aa3.45□□□□□ -1.86
RGPD3-202ENST00000409886 EP300Q09472 2414 aaPredicted RBP3.45□□□□□ -1.86
RGPD3-202ENST00000409886 RFX7Q2KHR2 1363 aa3.45□□□□□ -1.86
RGPD3-202ENST00000409886 FOXD2O60548 495 aaPredicted RBP3.45□□□□□ -1.86
RGPD3-202ENST00000409886 NOL4O94818 638 aa3.45□□□□□ -1.86
RGPD3-202ENST00000409886 CCNFP41002 786 aa3.45□□□□□ -1.86
RGPD3-202ENST00000409886 MYL5Q02045 173 aa3.45□□□□□ -1.86
RGPD3-202ENST00000409886 DOK7Q18PE1 504 aa3.45□□□□□ -1.86
RGPD3-202ENST00000409886 TTC31Q49AM3 519 aaPredicted RBP3.45□□□□□ -1.86
RGPD3-202ENST00000409886 PREPLQ4J6C6 727 aaPredicted RBP3.45□□□□□ -1.86
RGPD3-202ENST00000409886 TMEM240Q5SV17 173 aa3.45□□□□□ -1.86
RGPD3-202ENST00000409886 ANO7Q6IWH7 933 aa3.45□□□□□ -1.86
RGPD3-202ENST00000409886 MTHFD1LQ6UB35 978 aa3.45□□□□□ -1.86
RGPD3-202ENST00000409886 TEX11Q8IYF3 940 aa3.45□□□□□ -1.86
RGPD3-202ENST00000409886 CLASRPQ8N2M8 674 aaKnown RBP3.45□□□□□ -1.86
RGPD3-202ENST00000409886 KDF1Q8NAX2 398 aaPredicted RBP3.45□□□□□ -1.86
RGPD3-202ENST00000409886 XAGE3Q8WTP9 111 aa3.45□□□□□ -1.86
RGPD3-202ENST00000409886 CEP89Q96ST8 783 aa3.45□□□□□ -1.86
RGPD3-202ENST00000409886 MMTAG2Q9BU76 263 aaKnown RBP3.45□□□□□ -1.86
RGPD3-202ENST00000409886 NKX2-4Q9H2Z4 354 aa3.45□□□□□ -1.86
RGPD3-202ENST00000409886 EPS8L2Q9H6S3 715 aa3.45□□□□□ -1.86
RGPD3-202ENST00000409886 GNL3LQ9NVN8 582 aaKnown RBP3.45□□□□□ -1.86
RGPD3-202ENST00000409886 DOCK6Q96HP0 2047 aa3.45□□□□□ -1.86
RGPD3-202ENST00000409886 PDCD11Q14690 1871 aaKnown RBP3.45□□□□□ -1.86
RGPD3-202ENST00000409886 SDK2Q58EX2 2172 aa3.45□□□□□ -1.86
RGPD3-202ENST00000409886 ICE1Q9Y2F5 2266 aa3.45□□□□□ -1.86
RGPD3-202ENST00000409886 PLEKHA8P1O95397 391 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms