RNA–Protein interactions for RNA: ENST00000409403.6

CLK1-202, Transcript of CDC like kinase 1, humanhuman

TSL 5

Gene CLK1, Length 1,664 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-202ENST00000409403 FLAD1Q8NFF5 587 aa6.26□□□□□ -1.41
CLK1-202ENST00000409403 CHAC2Q8WUX2 184 aa6.26□□□□□ -1.41
CLK1-202ENST00000409403 PPM1EQ8WY54 764 aa6.26□□□□□ -1.41
CLK1-202ENST00000409403 MAGEB10Q96LZ2 347 aaPredicted RBP6.26□□□□□ -1.41
CLK1-202ENST00000409403 ZFYVE21Q9BQ24 234 aa6.26□□□□□ -1.41
CLK1-202ENST00000409403 PHF20Q9BVI0 1012 aa6.26□□□□□ -1.41
CLK1-202ENST00000409403 ZBTB40Q9NUA8 1239 aa6.26□□□□□ -1.41
CLK1-202ENST00000409403 DONSONQ9NYP3 566 aa6.26□□□□□ -1.41
CLK1-202ENST00000409403 JRKLQ9Y4A0 524 aa6.26□□□□□ -1.41
CLK1-202ENST00000409403 IL16Q14005 1332 aa6.26□□□□□ -1.41
CLK1-202ENST00000409403 VCANP13611 3396 aa6.25□□□□□ -1.41
CLK1-202ENST00000409403 FER1L6Q2WGJ9 1857 aa6.25□□□□□ -1.41
CLK1-202ENST00000409403 LOC102724159A0A0B4J2E5 919 aa6.25□□□□□ -1.41
CLK1-202ENST00000409403 NPHP3-ACAD11A0A0J9YXS1 232 aa6.25□□□□□ -1.41
CLK1-202ENST00000409403 GCP02774 474 aa6.25□□□□□ -1.41
CLK1-202ENST00000409403 NAT1P18440 290 aa6.25□□□□□ -1.41
CLK1-202ENST00000409403 RPL10P27635 214 aaKnown RBP6.25□□□□□ -1.41
CLK1-202ENST00000409403 GRIK1P39086 918 aa6.25□□□□□ -1.41
CLK1-202ENST00000409403 MAGEA9P43362 315 aa6.25□□□□□ -1.41
CLK1-202ENST00000409403 CUL4AQ13619 759 aa6.25□□□□□ -1.41
CLK1-202ENST00000409403 PWP2Q15269 919 aaKnown RBP6.25□□□□□ -1.41
CLK1-202ENST00000409403 ZRSR1Q15695 479 aaKnown RBP6.25□□□□□ -1.41
CLK1-202ENST00000409403 ZSCAN26Q16670 478 aa6.25□□□□□ -1.41
CLK1-202ENST00000409403 MSMPQ1L6U9 139 aa6.25□□□□□ -1.41
CLK1-202ENST00000409403 CIAPIN1Q6FI81 312 aa6.25□□□□□ -1.41
CLK1-202ENST00000409403 KCNT2Q6UVM3 1135 aa6.25□□□□□ -1.41
CLK1-202ENST00000409403 KRBA2Q6ZNG9 492 aa6.25□□□□□ -1.41
CLK1-202ENST00000409403 FGD2Q7Z6J4 655 aa6.25□□□□□ -1.41
CLK1-202ENST00000409403 CCDC103Q8IW40 242 aa6.25□□□□□ -1.41
CLK1-202ENST00000409403 SUGP1Q8IWZ8 645 aaKnown RBP6.25□□□□□ -1.41
CLK1-202ENST00000409403 C17orf53Q8N3J3 647 aaPredicted RBP6.25□□□□□ -1.41
CLK1-202ENST00000409403 NAT16Q8N8M0 369 aa6.25□□□□□ -1.41
CLK1-202ENST00000409403 CCDC191Q8NCU4 936 aa6.25□□□□□ -1.41
CLK1-202ENST00000409403 DIO2Q92813 273 aa6.25□□□□□ -1.41
CLK1-202ENST00000409403 SCLYQ96I15 445 aa6.25□□□□□ -1.41
CLK1-202ENST00000409403 CFAP53Q96M91 514 aa6.25□□□□□ -1.41
CLK1-202ENST00000409403 PTCHD1Q96NR3 888 aa6.25□□□□□ -1.41
CLK1-202ENST00000409403 CAAP1Q9H8G2 361 aa6.25□□□□□ -1.41
CLK1-202ENST00000409403 MED4Q9NPJ6 270 aa6.25□□□□□ -1.41
CLK1-202ENST00000409403 GPR27Q9NS67 375 aa6.25□□□□□ -1.41
CLK1-202ENST00000409403 RAI14Q9P0K7 980 aa6.25□□□□□ -1.41
CLK1-202ENST00000409403 TMEFF2Q9UIK5 374 aaPredicted RBP6.25□□□□□ -1.41
CLK1-202ENST00000409403 MAPRE3Q9UPY8 281 aa6.25□□□□□ -1.41
CLK1-202ENST00000409403 LRRFIP2Q9Y608 721 aaKnown RBP6.25□□□□□ -1.41
CLK1-202ENST00000409403 CACNA1SQ13698 1873 aa6.24□□□□□ -1.41
CLK1-202ENST00000409403 CCDC196A0A1B0GTZ2 297 aa6.24□□□□□ -1.41
CLK1-202ENST00000409403 GSG1L2A8MUP6 293 aa6.24□□□□□ -1.41
CLK1-202ENST00000409403 ARNTLO00327 626 aa6.24□□□□□ -1.41
CLK1-202ENST00000409403 NRDCO43847 1150 aa6.24□□□□□ -1.41
CLK1-202ENST00000409403 CRTAMO95727 393 aa6.24□□□□□ -1.41
CLK1-202ENST00000409403 ASLP04424 464 aa6.24□□□□□ -1.41
CLK1-202ENST00000409403 H2AFXP16104 143 aaPredicted RBP6.24□□□□□ -1.41
CLK1-202ENST00000409403 CNGA1P29973 690 aa6.24□□□□□ -1.41
CLK1-202ENST00000409403 SOX5P35711 763 aa6.24□□□□□ -1.41
CLK1-202ENST00000409403 GPR85P60893 370 aa6.24□□□□□ -1.41
CLK1-202ENST00000409403 AMPD3Q01432 767 aa6.24□□□□□ -1.41
CLK1-202ENST00000409403 ALDH1L2Q3SY69 923 aa6.24□□□□□ -1.41
CLK1-202ENST00000409403 PRSS36Q5K4E3 855 aa6.24□□□□□ -1.41
CLK1-202ENST00000409403 CNNM4Q6P4Q7 775 aa6.24□□□□□ -1.41
CLK1-202ENST00000409403 TMCO3Q6UWJ1 677 aa6.24□□□□□ -1.41
CLK1-202ENST00000409403 CYP2R1Q6VVX0 501 aa6.24□□□□□ -1.41
CLK1-202ENST00000409403 LEKR1Q6ZMV7 388 aa6.24□□□□□ -1.41
CLK1-202ENST00000409403 SRLQ86TD4 932 aa6.24□□□□□ -1.41
CLK1-202ENST00000409403 IFNL3Q8IZI9 196 aa6.24□□□□□ -1.41
CLK1-202ENST00000409403 FBXO18Q8NFZ0 1043 aa6.24□□□□□ -1.41
CLK1-202ENST00000409403 EXOC4Q96A65 974 aa6.24□□□□□ -1.41
CLK1-202ENST00000409403 C16orf45Q96MC5 204 aaPredicted RBP6.24□□□□□ -1.41
CLK1-202ENST00000409403 MMP19Q99542 508 aa6.24□□□□□ -1.41
CLK1-202ENST00000409403 TARS2Q9BW92 718 aaKnown RBP6.24□□□□□ -1.41
CLK1-202ENST00000409403 KCND1Q9NSA2 647 aa6.24□□□□□ -1.41
CLK1-202ENST00000409403 ZDHHC9Q9Y397 364 aa6.24□□□□□ -1.41
CLK1-202ENST00000409403 TNPO3Q9Y5L0 923 aaKnown RBP6.24□□□□□ -1.41
CLK1-202ENST00000409403 AK9Q5TCS8 1911 aa6.24□□□□□ -1.41
CLK1-202ENST00000409403 CPSF1Q10570 1443 aaKnown RBP6.24□□□□□ -1.41
CLK1-202ENST00000409403 CCP110O43303 1012 aa6.23□□□□□ -1.41
CLK1-202ENST00000409403 OPA1O60313 960 aa6.23□□□□□ -1.41
CLK1-202ENST00000409403 DDNO94850 711 aaPredicted RBP6.23□□□□□ -1.41
CLK1-202ENST00000409403 TBC1D8O95759 1140 aa6.23□□□□□ -1.41
CLK1-202ENST00000409403 TRIM27P14373 513 aa6.23□□□□□ -1.41
CLK1-202ENST00000409403 IGFALSP35858 605 aa6.23□□□□□ -1.41
CLK1-202ENST00000409403 MAP2K2P36507 400 aa6.23□□□□□ -1.41
CLK1-202ENST00000409403 GUCY1A3Q02108 690 aa6.23□□□□□ -1.41
CLK1-202ENST00000409403 PTPN14Q15678 1187 aa6.23□□□□□ -1.41
CLK1-202ENST00000409403 MCTP2Q6DN12 878 aa6.23□□□□□ -1.41
CLK1-202ENST00000409403 INTS5Q6P9B9 1019 aaKnown RBP6.23□□□□□ -1.41
CLK1-202ENST00000409403 FBXO38Q6PIJ6 1188 aa6.23□□□□□ -1.41
CLK1-202ENST00000409403 ZPBP2Q6X784 338 aa6.23□□□□□ -1.41
CLK1-202ENST00000409403 SYT10Q6XYQ8 523 aa6.23□□□□□ -1.41
CLK1-202ENST00000409403 CTU1Q7Z7A3 348 aaKnown RBP6.23□□□□□ -1.41
CLK1-202ENST00000409403 MTDHQ86UE4 582 aaKnown RBP6.23□□□□□ -1.41
CLK1-202ENST00000409403 C10orf67Q8IYJ2 551 aa6.23□□□□□ -1.41
CLK1-202ENST00000409403 STK11IPQ8N1F8 1099 aa6.23□□□□□ -1.41
CLK1-202ENST00000409403 PPM1KQ8N3J5 372 aa6.23□□□□□ -1.41
CLK1-202ENST00000409403 FCRL2Q96LA5 508 aaPredicted RBP6.23□□□□□ -1.41
CLK1-202ENST00000409403 CEP89Q96ST8 783 aa6.23□□□□□ -1.41
CLK1-202ENST00000409403 BSDC1Q9NW68 430 aaPredicted RBP6.23□□□□□ -1.41
CLK1-202ENST00000409403 POLKQ9UBT6 870 aa6.23□□□□□ -1.41
CLK1-202ENST00000409403 ZNF281Q9Y2X9 895 aa6.23□□□□□ -1.41
CLK1-202ENST00000409403 RRP15Q9Y3B9 282 aaKnown RBP6.23□□□□□ -1.41
CLK1-202ENST00000409403 PCDHA9Q9Y5H5 950 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms