RNA–Protein interactions for RNA: ENST00000409141.5

PDLIM2-206, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-206ENST00000409141 LINC01599Q8WXQ3 324 aa20.02■□□□□ 0.8
PDLIM2-206ENST00000409141 TMEM143Q96AN5 459 aa20.02■□□□□ 0.8
PDLIM2-206ENST00000409141 YME1L1Q96TA2 773 aa20.02■□□□□ 0.8
PDLIM2-206ENST00000409141 TSPYL2Q9H2G4 693 aaPredicted RBP20.02■□□□□ 0.8
PDLIM2-206ENST00000409141 CERS4Q9HA82 394 aa20.02■□□□□ 0.8
PDLIM2-206ENST00000409141 DENND3A2RUS2 1198 aa20.01■□□□□ 0.79
PDLIM2-206ENST00000409141 ARHGEF15O94989 841 aa20.01■□□□□ 0.79
PDLIM2-206ENST00000409141 DARSP14868 501 aaKnown RBP20.01■□□□□ 0.79
PDLIM2-206ENST00000409141 SYT1P21579 422 aa20.01■□□□□ 0.79
PDLIM2-206ENST00000409141 RPA1P27694 616 aa20.01■□□□□ 0.79
PDLIM2-206ENST00000409141 PRPHP41219 470 aa20.01■□□□□ 0.79
PDLIM2-206ENST00000409141 HTRA4P83105 476 aaPredicted RBP20.01■□□□□ 0.79
PDLIM2-206ENST00000409141 EMC2Q15006 297 aa20.01■□□□□ 0.79
PDLIM2-206ENST00000409141 DTHD1Q6ZMT9 781 aa20.01■□□□□ 0.79
PDLIM2-206ENST00000409141 TCP11Q8WWU5 503 aa20.01■□□□□ 0.79
PDLIM2-206ENST00000409141 NACC1Q96RE7 527 aa20.01■□□□□ 0.79
PDLIM2-206ENST00000409141 GCOM2Q9BZD3 368 aaPredicted RBP20.01■□□□□ 0.79
PDLIM2-206ENST00000409141 LOXHD1Q8IVV2 1947 aa20.01■□□□□ 0.79
PDLIM2-206ENST00000409141 MYO9BQ13459 2157 aa20.01■□□□□ 0.79
PDLIM2-206ENST00000409141 A0A087WZ62 844 aa20■□□□□ 0.79
PDLIM2-206ENST00000409141 FOSL2P15408 326 aa20■□□□□ 0.79
PDLIM2-206ENST00000409141 CCT6AP40227 531 aaKnown RBP20■□□□□ 0.79
PDLIM2-206ENST00000409141 HAUS3Q68CZ6 603 aa20■□□□□ 0.79
PDLIM2-206ENST00000409141 ZNF410Q86VK4 478 aa20■□□□□ 0.79
PDLIM2-206ENST00000409141 KSR1Q8IVT5 923 aa20■□□□□ 0.79
PDLIM2-206ENST00000409141 IGSF22Q8N9C0 903 aa20■□□□□ 0.79
PDLIM2-206ENST00000409141 PRPF31Q8WWY3 499 aaKnown RBP20■□□□□ 0.79
PDLIM2-206ENST00000409141 PSPC1Q8WXF1 523 aaKnown RBP20■□□□□ 0.79
PDLIM2-206ENST00000409141 GAS2L1Q99501 681 aaPredicted RBP20■□□□□ 0.79
PDLIM2-206ENST00000409141 MTRQ99707 1265 aa20■□□□□ 0.79
PDLIM2-206ENST00000409141 ADAM2Q99965 735 aa20■□□□□ 0.79
PDLIM2-206ENST00000409141 FDXACB1Q9BRP7 624 aaPredicted RBP20■□□□□ 0.79
PDLIM2-206ENST00000409141 STK24Q9Y6E0 443 aa20■□□□□ 0.79
PDLIM2-206ENST00000409141 GAS2O43903 313 aaKnown RBP19.99■□□□□ 0.79
PDLIM2-206ENST00000409141 MGEA5O60502 916 aa19.99■□□□□ 0.79
PDLIM2-206ENST00000409141 DGAT1O75907 488 aa19.99■□□□□ 0.79
PDLIM2-206ENST00000409141 IBSPP21815 317 aaPredicted RBP19.99■□□□□ 0.79
PDLIM2-206ENST00000409141 RARRES1P49788 294 aa19.99■□□□□ 0.79
PDLIM2-206ENST00000409141 ATP2C1P98194 919 aaPredicted RBP19.99■□□□□ 0.79
PDLIM2-206ENST00000409141 IL17AQ16552 155 aa19.99■□□□□ 0.79
PDLIM2-206ENST00000409141 POTEGQ6S5H5 508 aa19.99■□□□□ 0.79
PDLIM2-206ENST00000409141 ARNTL2Q8WYA1 636 aa19.99■□□□□ 0.79
PDLIM2-206ENST00000409141 NLRP4Q96MN2 994 aa19.99■□□□□ 0.79
PDLIM2-206ENST00000409141 INO80BQ9C086 356 aaPredicted RBP19.99■□□□□ 0.79
PDLIM2-206ENST00000409141 RGS18Q9NS28 235 aa19.99■□□□□ 0.79
PDLIM2-206ENST00000409141 COL4A3BPQ9Y5P4 624 aa19.99■□□□□ 0.79
PDLIM2-206ENST00000409141 LINC01553A4QN01 128 aa19.99■□□□□ 0.79
PDLIM2-206ENST00000409141 ASAP2O43150 1006 aa19.99■□□□□ 0.79
PDLIM2-206ENST00000409141 CSDE1O75534 798 aaKnown RBP19.99■□□□□ 0.79
PDLIM2-206ENST00000409141 HSP90AA1P07900 732 aaKnown RBP19.99■□□□□ 0.79
PDLIM2-206ENST00000409141 MUTP22033 750 aa19.99■□□□□ 0.79
PDLIM2-206ENST00000409141 FGFR4P22455 802 aa19.99■□□□□ 0.79
PDLIM2-206ENST00000409141 SNX29Q8TEQ0 813 aa19.99■□□□□ 0.79
PDLIM2-206ENST00000409141 ATP6V0A4Q9HBG4 840 aa19.99■□□□□ 0.79
PDLIM2-206ENST00000409141 C1orf112Q9NSG2 853 aa19.99■□□□□ 0.79
PDLIM2-206ENST00000409141 DBR1Q9UK59 544 aaKnown RBP19.99■□□□□ 0.79
PDLIM2-206ENST00000409141 CHD9Q3L8U1 2897 aa19.98■□□□□ 0.79
PDLIM2-206ENST00000409141 STAG3L1P0CL83 205 aa19.98■□□□□ 0.79
PDLIM2-206ENST00000409141 SRGAP2CP0DJJ0 459 aa19.98■□□□□ 0.79
PDLIM2-206ENST00000409141 ZSCAN20P17040 1043 aaPredicted RBP19.98■□□□□ 0.79
PDLIM2-206ENST00000409141 LAMTOR4Q0VGL1 99 aa19.98■□□□□ 0.79
PDLIM2-206ENST00000409141 KRT79Q5XKE5 535 aa19.98■□□□□ 0.79
PDLIM2-206ENST00000409141 SLC24A5Q71RS6 500 aa19.98■□□□□ 0.79
PDLIM2-206ENST00000409141 SPRED2Q7Z698 418 aa19.98■□□□□ 0.79
PDLIM2-206ENST00000409141 NPAS4Q8IUM7 802 aa19.98■□□□□ 0.79
PDLIM2-206ENST00000409141 SP7Q8TDD2 431 aaPredicted RBP19.98■□□□□ 0.79
PDLIM2-206ENST00000409141 TGS1Q96RS0 853 aaKnown RBP19.98■□□□□ 0.79
PDLIM2-206ENST00000409141 XPNPEP1Q9NQW7 623 aa19.98■□□□□ 0.79
PDLIM2-206ENST00000409141 LRFN2Q9ULH4 789 aa19.98■□□□□ 0.79
PDLIM2-206ENST00000409141 SARSP49591 514 aaKnown RBP19.97■□□□□ 0.79
PDLIM2-206ENST00000409141 DSC3Q14574 896 aa19.97■□□□□ 0.79
PDLIM2-206ENST00000409141 ECM1Q16610 540 aa19.97■□□□□ 0.79
PDLIM2-206ENST00000409141 ARL6IP4Q66PJ3 421 aaKnown RBP19.97■□□□□ 0.79
PDLIM2-206ENST00000409141 RNF216Q9NWF9 866 aaPredicted RBP19.97■□□□□ 0.79
PDLIM2-206ENST00000409141 MTUS1Q9ULD2 1270 aa19.97■□□□□ 0.79
PDLIM2-206ENST00000409141 KIAA1024Q9UPX6 916 aa19.97■□□□□ 0.79
PDLIM2-206ENST00000409141 PCDHB7Q9Y5E2 793 aa19.97■□□□□ 0.79
PDLIM2-206ENST00000409141 TTC3P53804 2025 aa19.96■□□□□ 0.79
PDLIM2-206ENST00000409141 VWA3AA6NCI4 1184 aa19.96■□□□□ 0.79
PDLIM2-206ENST00000409141 PP2D1A8MPX8 630 aa19.96■□□□□ 0.79
PDLIM2-206ENST00000409141 RFXAPO00287 272 aa19.96■□□□□ 0.79
PDLIM2-206ENST00000409141 USO1O60763 962 aaKnown RBP19.96■□□□□ 0.79
PDLIM2-206ENST00000409141 IGFBP4P22692 258 aa19.96■□□□□ 0.79
PDLIM2-206ENST00000409141 SFPQP23246 707 aaKnown RBP eCLIP19.96■□□□□ 0.79
PDLIM2-206ENST00000409141 CDC25AP30304 524 aa19.96■□□□□ 0.79
PDLIM2-206ENST00000409141 ERVK-21P61565 698 aa19.96■□□□□ 0.79
PDLIM2-206ENST00000409141 MXD4Q14582 209 aaPredicted RBP19.96■□□□□ 0.79
PDLIM2-206ENST00000409141 CRIPAKQ8N1N5 446 aa19.96■□□□□ 0.79
PDLIM2-206ENST00000409141 IFT122Q9HBG6 1241 aa19.96■□□□□ 0.79
PDLIM2-206ENST00000409141 MTMR6Q9Y217 621 aa19.96■□□□□ 0.79
PDLIM2-206ENST00000409141 ARHGEF35A5YM69 484 aa19.95■□□□□ 0.78
PDLIM2-206ENST00000409141 EPOPA6NHQ4 379 aa19.95■□□□□ 0.78
PDLIM2-206ENST00000409141 C9IYK1 514 aa19.95■□□□□ 0.78
PDLIM2-206ENST00000409141 STX6O43752 255 aa19.95■□□□□ 0.78
PDLIM2-206ENST00000409141 DGKIO75912 1065 aa19.95■□□□□ 0.78
PDLIM2-206ENST00000409141 BMP15O95972 392 aa19.95■□□□□ 0.78
PDLIM2-206ENST00000409141 RESTQ13127 1097 aa19.95■□□□□ 0.78
PDLIM2-206ENST00000409141 ADGRE1Q14246 886 aa19.95■□□□□ 0.78
PDLIM2-206ENST00000409141 SF3A1Q15459 793 aaKnown RBP19.95■□□□□ 0.78
PDLIM2-206ENST00000409141 MAEAQ7L5Y9 396 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms