RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 C15orf41Q9Y2V0 281 aa18.9■□□□□ 0.62
SMPD4-202ENST00000409031 IQGAP3Q86VI3 1631 aa18.9■□□□□ 0.62
SMPD4-202ENST00000409031 FAM47DPA6NHR8 397 aa18.89■□□□□ 0.62
SMPD4-202ENST00000409031 UFL1O94874 794 aa18.89■□□□□ 0.62
SMPD4-202ENST00000409031 DNAL1Q4LDG9 190 aa18.89■□□□□ 0.62
SMPD4-202ENST00000409031 FAM102BQ5T8I3 360 aa18.89■□□□□ 0.62
SMPD4-202ENST00000409031 SCYL2Q6P3W7 929 aa18.89■□□□□ 0.62
SMPD4-202ENST00000409031 FBXO11Q86XK2 927 aa18.89■□□□□ 0.62
SMPD4-202ENST00000409031 LRRC47Q8N1G4 583 aaKnown RBP18.89■□□□□ 0.62
SMPD4-202ENST00000409031 PRPF38AQ8NAV1 312 aaKnown RBP18.89■□□□□ 0.62
SMPD4-202ENST00000409031 PIGSQ96S52 555 aa18.89■□□□□ 0.62
SMPD4-202ENST00000409031 EHD2Q9NZN4 543 aa18.89■□□□□ 0.62
SMPD4-202ENST00000409031 ANKFY1Q9P2R3 1169 aa18.89■□□□□ 0.62
SMPD4-202ENST00000409031 CNGA1P29973 690 aa18.89■□□□□ 0.61
SMPD4-202ENST00000409031 COASYQ13057 564 aa18.89■□□□□ 0.61
SMPD4-202ENST00000409031 JADE1Q6IE81 842 aa18.89■□□□□ 0.61
SMPD4-202ENST00000409031 TTLL11Q8NHH1 800 aa18.89■□□□□ 0.61
SMPD4-202ENST00000409031 ANAPC7Q9UJX3 599 aa18.89■□□□□ 0.61
SMPD4-202ENST00000409031 DBR1Q9UK59 544 aaKnown RBP18.89■□□□□ 0.61
SMPD4-202ENST00000409031 TARBP1Q13395 1621 aaKnown RBP18.89■□□□□ 0.61
SMPD4-202ENST00000409031 LIG4P49917 911 aa18.89■□□□□ 0.61
SMPD4-202ENST00000409031 USP11P51784 963 aa18.89■□□□□ 0.61
SMPD4-202ENST00000409031 DYNLL1P63167 89 aaKnown RBP18.89■□□□□ 0.61
SMPD4-202ENST00000409031 TEKT3Q9BXF9 490 aa18.89■□□□□ 0.61
SMPD4-202ENST00000409031 EIF2AQ9BY44 585 aaKnown RBP18.89■□□□□ 0.61
SMPD4-202ENST00000409031 TRABDQ9H4I3 376 aa18.89■□□□□ 0.61
SMPD4-202ENST00000409031 CNOT8Q9UFF9 292 aaKnown RBP18.89■□□□□ 0.61
SMPD4-202ENST00000409031 DDX20Q9UHI6 824 aaKnown RBP18.89■□□□□ 0.61
SMPD4-202ENST00000409031 PTPAQ15257 358 aa18.89■□□□□ 0.61
SMPD4-202ENST00000409031 TMED8Q6PL24 325 aaPredicted RBP18.89■□□□□ 0.61
SMPD4-202ENST00000409031 SYDE1Q6ZW31 735 aaPredicted RBP18.89■□□□□ 0.61
SMPD4-202ENST00000409031 RBM41Q96IZ5 413 aaKnown RBP18.89■□□□□ 0.61
SMPD4-202ENST00000409031 BRIP1Q9BX63 1249 aa18.89■□□□□ 0.61
SMPD4-202ENST00000409031 FCER1AP12319 257 aa18.88■□□□□ 0.61
SMPD4-202ENST00000409031 ZNF18P17022 549 aa18.88■□□□□ 0.61
SMPD4-202ENST00000409031 GUCY1A2P33402 732 aa18.88■□□□□ 0.61
SMPD4-202ENST00000409031 HIC1Q14526 733 aa18.88■□□□□ 0.61
SMPD4-202ENST00000409031 PHF2O75151 1096 aa18.88■□□□□ 0.61
SMPD4-202ENST00000409031 NR3C1P04150 777 aa18.88■□□□□ 0.61
SMPD4-202ENST00000409031 HSPA8P11142 646 aaKnown RBP18.88■□□□□ 0.61
SMPD4-202ENST00000409031 ZFXP17010 805 aaPredicted RBP18.88■□□□□ 0.61
SMPD4-202ENST00000409031 POMGNT1Q8WZA1 660 aa18.88■□□□□ 0.61
SMPD4-202ENST00000409031 PABPC3Q9H361 631 aaKnown RBP18.88■□□□□ 0.61
SMPD4-202ENST00000409031 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.88■□□□□ 0.611e-6■■■■□ 23.9
SMPD4-202ENST00000409031 O00370 1275 aa18.88■□□□□ 0.61
SMPD4-202ENST00000409031 TBX2Q13207 712 aaPredicted RBP18.88■□□□□ 0.61
SMPD4-202ENST00000409031 KRT39Q6A163 491 aa18.88■□□□□ 0.61
SMPD4-202ENST00000409031 ENAHQ8N8S7 591 aaPredicted RBP18.88■□□□□ 0.61
SMPD4-202ENST00000409031 GIMAP8Q8ND71 665 aaPredicted RBP18.88■□□□□ 0.61
SMPD4-202ENST00000409031 PIGOQ8TEQ8 1089 aa18.88■□□□□ 0.61
SMPD4-202ENST00000409031 ACSBG1Q96GR2 724 aa18.88■□□□□ 0.61
SMPD4-202ENST00000409031 NACC1Q96RE7 527 aa18.88■□□□□ 0.61
SMPD4-202ENST00000409031 GGA2Q9UJY4 613 aa18.88■□□□□ 0.61
SMPD4-202ENST00000409031 PCDHB4Q9Y5E5 795 aa18.88■□□□□ 0.61
SMPD4-202ENST00000409031 DNAJC6O75061 913 aa18.88■□□□□ 0.61
SMPD4-202ENST00000409031 KRT10P13645 584 aa18.88■□□□□ 0.61
SMPD4-202ENST00000409031 P4HA1P13674 534 aa18.88■□□□□ 0.61
SMPD4-202ENST00000409031 ITIH2P19823 946 aa18.88■□□□□ 0.61
SMPD4-202ENST00000409031 BZW1Q7L1Q6 419 aaKnown RBP18.88■□□□□ 0.61
SMPD4-202ENST00000409031 SKAP2O75563 359 aaPredicted RBP18.87■□□□□ 0.61
SMPD4-202ENST00000409031 CDK17Q00537 523 aa18.87■□□□□ 0.61
SMPD4-202ENST00000409031 RASGRF1Q13972 1273 aa18.87■□□□□ 0.61
SMPD4-202ENST00000409031 NAALADL2Q58DX5 795 aa18.87■□□□□ 0.61
SMPD4-202ENST00000409031 TEDDM1Q5T9Z0 273 aa18.87■□□□□ 0.61
SMPD4-202ENST00000409031 DNAJC24Q6P3W2 148 aa18.87■□□□□ 0.61
SMPD4-202ENST00000409031 GLYCTKQ8IVS8 523 aa18.87■□□□□ 0.61
SMPD4-202ENST00000409031 FAM129AQ9BZQ8 928 aa18.87■□□□□ 0.61
SMPD4-202ENST00000409031 MRPL40Q9NQ50 206 aaKnown RBP18.87■□□□□ 0.61
SMPD4-202ENST00000409031 CCDC87Q9NVE4 849 aa18.87■□□□□ 0.61
SMPD4-202ENST00000409031 SALL3Q9BXA9 1300 aa18.87■□□□□ 0.61
SMPD4-202ENST00000409031 PP2D1A8MPX8 630 aa18.87■□□□□ 0.61
SMPD4-202ENST00000409031 JAMLQ86YT9 394 aa18.87■□□□□ 0.61
SMPD4-202ENST00000409031 RANBP17Q9H2T7 1088 aaKnown RBP18.87■□□□□ 0.61
SMPD4-202ENST00000409031 DCLRE1BQ9H816 532 aa18.87■□□□□ 0.61
SMPD4-202ENST00000409031 TTLL1O95922 423 aa18.87■□□□□ 0.61
SMPD4-202ENST00000409031 KRT19P08727 400 aa18.87■□□□□ 0.61
SMPD4-202ENST00000409031 DRAP1Q14919 205 aaPredicted RBP18.87■□□□□ 0.61
SMPD4-202ENST00000409031 SLC44A4Q53GD3 710 aa18.87■□□□□ 0.61
SMPD4-202ENST00000409031 ACBD5Q5T8D3 534 aaPredicted RBP18.87■□□□□ 0.61
SMPD4-202ENST00000409031 CCDC125Q86Z20 511 aa18.87■□□□□ 0.61
SMPD4-202ENST00000409031 TFR2Q9UP52 801 aa18.87■□□□□ 0.61
SMPD4-202ENST00000409031 FTLP02792 175 aaPredicted RBP18.86■□□□□ 0.61
SMPD4-202ENST00000409031 DMP1Q13316 513 aaPredicted RBP18.86■□□□□ 0.61
SMPD4-202ENST00000409031 SLC29A2Q14542 456 aa18.86■□□□□ 0.61
SMPD4-202ENST00000409031 LONRF1Q17RB8 773 aa18.86■□□□□ 0.61
SMPD4-202ENST00000409031 XKR9Q5GH70 373 aa18.86■□□□□ 0.61
SMPD4-202ENST00000409031 SYN2Q92777 582 aaPredicted RBP18.86■□□□□ 0.61
SMPD4-202ENST00000409031 AMNQ9BXJ7 453 aa18.86■□□□□ 0.61
SMPD4-202ENST00000409031 GGA1Q9UJY5 639 aa18.86■□□□□ 0.61
SMPD4-202ENST00000409031 KLRC1P26715 233 aa18.86■□□□□ 0.61
SMPD4-202ENST00000409031 ATP11CQ8NB49 1132 aa18.86■□□□□ 0.61
SMPD4-202ENST00000409031 ZNF564Q8TBZ8 553 aaPredicted RBP18.86■□□□□ 0.61
SMPD4-202ENST00000409031 PRPF31Q8WWY3 499 aaKnown RBP18.86■□□□□ 0.61
SMPD4-202ENST00000409031 PPCSQ9HAB8 311 aa18.86■□□□□ 0.61
SMPD4-202ENST00000409031 ARHGEF40Q8TER5 1519 aa18.86■□□□□ 0.61
SMPD4-202ENST00000409031 LPXNO60711 386 aa18.86■□□□□ 0.61
SMPD4-202ENST00000409031 RFX1P22670 979 aa18.86■□□□□ 0.61
SMPD4-202ENST00000409031 PPP2R5CQ13362 524 aa18.86■□□□□ 0.61
SMPD4-202ENST00000409031 KNOP1Q1ED39 458 aaKnown RBP18.86■□□□□ 0.61
SMPD4-202ENST00000409031 FIGNQ5HY92 759 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms