RNA–Protein interactions for RNA: ENST00000408509.1

MIR548F3-201, Transcript of microRNA 548f-3, humanhuman

BASIC

Gene MIR548F3, Length 87 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR548F3-201ENST00000408509 CELA1Q9UNI1 258 aa-0.76□□□□□ -2.53
MIR548F3-201ENST00000408509 AMOTL2Q9Y2J4 779 aa-0.76□□□□□ -2.53
MIR548F3-201ENST00000408509 CROCCQ5TZA2 2017 aa-0.76□□□□□ -2.53
MIR548F3-201ENST00000408509 TTC3P53804 2025 aa-0.77□□□□□ -2.53
MIR548F3-201ENST00000408509 COL16A1Q07092 1604 aaPredicted RBP-0.77□□□□□ -2.53
MIR548F3-201ENST00000408509 LY6G6EA0A0G2JKS1 128 aa-0.77□□□□□ -2.53
MIR548F3-201ENST00000408509 PRAMEF22A3QJZ6 481 aa-0.77□□□□□ -2.53
MIR548F3-201ENST00000408509 PALM3A6NDB9 673 aaPredicted RBP-0.77□□□□□ -2.53
MIR548F3-201ENST00000408509 B4DGG1 531 aa-0.77□□□□□ -2.53
MIR548F3-201ENST00000408509 TRIM24O15164 1050 aa-0.77□□□□□ -2.53
MIR548F3-201ENST00000408509 LZTS3O60299 673 aaPredicted RBP-0.77□□□□□ -2.53
MIR548F3-201ENST00000408509 SRSF10O75494 262 aaKnown RBP-0.77□□□□□ -2.53
MIR548F3-201ENST00000408509 PSG1P11464 419 aa-0.77□□□□□ -2.53
MIR548F3-201ENST00000408509 VAV1P15498 845 aa-0.77□□□□□ -2.53
MIR548F3-201ENST00000408509 GZMKP49863 264 aa-0.77□□□□□ -2.53
MIR548F3-201ENST00000408509 RTP2Q5QGT7 225 aa-0.77□□□□□ -2.53
MIR548F3-201ENST00000408509 ABHD15Q6UXT9 468 aa-0.77□□□□□ -2.53
MIR548F3-201ENST00000408509 MEX3BQ6ZN04 569 aaKnown RBP-0.77□□□□□ -2.53
MIR548F3-201ENST00000408509 USP30Q70CQ3 517 aa-0.77□□□□□ -2.53
MIR548F3-201ENST00000408509 HTR3DQ70Z44 454 aa-0.77□□□□□ -2.53
MIR548F3-201ENST00000408509 MILR1Q7Z6M3 343 aa-0.77□□□□□ -2.53
MIR548F3-201ENST00000408509 MRPL41Q8IXM3 137 aaKnown RBP-0.77□□□□□ -2.53
MIR548F3-201ENST00000408509 SYNPOQ8N3V7 929 aa-0.77□□□□□ -2.53
MIR548F3-201ENST00000408509 STPG3Q8N7X2 389 aa-0.77□□□□□ -2.53
MIR548F3-201ENST00000408509 CPEB3Q8NE35 698 aaKnown RBP-0.77□□□□□ -2.53
MIR548F3-201ENST00000408509 TTC16Q8NEE8 873 aa-0.77□□□□□ -2.53
MIR548F3-201ENST00000408509 LMO3Q8TAP4 145 aa-0.77□□□□□ -2.53
MIR548F3-201ENST00000408509 ACSF2Q96CM8 615 aaPredicted RBP-0.77□□□□□ -2.53
MIR548F3-201ENST00000408509 REPS1Q96D71 796 aa-0.77□□□□□ -2.53
MIR548F3-201ENST00000408509 ZNF668Q96K58 619 aaPredicted RBP-0.77□□□□□ -2.53
MIR548F3-201ENST00000408509 SCYL1Q96KG9 808 aa-0.77□□□□□ -2.53
MIR548F3-201ENST00000408509 ATOH8Q96SQ7 321 aa-0.77□□□□□ -2.53
MIR548F3-201ENST00000408509 TIMP4Q99727 224 aa-0.77□□□□□ -2.53
MIR548F3-201ENST00000408509 AP5M1Q9H0R1 490 aa-0.77□□□□□ -2.53
MIR548F3-201ENST00000408509 FAM234AQ9H0X4 552 aa-0.77□□□□□ -2.53
MIR548F3-201ENST00000408509 NKX2-4Q9H2Z4 354 aa-0.77□□□□□ -2.53
MIR548F3-201ENST00000408509 CD93Q9NPY3 652 aa-0.77□□□□□ -2.53
MIR548F3-201ENST00000408509 RNF181Q9P0P0 153 aa-0.77□□□□□ -2.53
MIR548F3-201ENST00000408509 A0A0U1RQF3 1178 aa-0.78□□□□□ -2.53
MIR548F3-201ENST00000408509 SMIM35A0A1B0GVV1 85 aa-0.78□□□□□ -2.53
MIR548F3-201ENST00000408509 KLLNB2CW77 178 aa-0.78□□□□□ -2.53
MIR548F3-201ENST00000408509 RNASET2O00584 256 aaKnown RBP-0.78□□□□□ -2.53
MIR548F3-201ENST00000408509 TOMM40O96008 361 aa-0.78□□□□□ -2.53
MIR548F3-201ENST00000408509 PRF1P14222 555 aa-0.78□□□□□ -2.53
MIR548F3-201ENST00000408509 SP100P23497 879 aaPredicted RBP-0.78□□□□□ -2.53
MIR548F3-201ENST00000408509 USP5P45974 858 aa-0.78□□□□□ -2.53
MIR548F3-201ENST00000408509 GLIPR1P48060 266 aa-0.78□□□□□ -2.53
MIR548F3-201ENST00000408509 ERVFC1-1P60608 527 aa-0.78□□□□□ -2.53
MIR548F3-201ENST00000408509 SNW1Q13573 536 aaKnown RBP-0.78□□□□□ -2.53
MIR548F3-201ENST00000408509 RAB33AQ14088 237 aa-0.78□□□□□ -2.53
MIR548F3-201ENST00000408509 KEAP1Q14145 624 aa-0.78□□□□□ -2.53
MIR548F3-201ENST00000408509 NAA30Q147X3 362 aaPredicted RBP-0.78□□□□□ -2.53
MIR548F3-201ENST00000408509 CCDC6Q16204 474 aa-0.78□□□□□ -2.53
MIR548F3-201ENST00000408509 RPS26P11Q5JNZ5 115 aaPredicted RBP-0.78□□□□□ -2.53
MIR548F3-201ENST00000408509 SLC6A19Q695T7 634 aa-0.78□□□□□ -2.53
MIR548F3-201ENST00000408509 TEPPQ6URK8 271 aa-0.78□□□□□ -2.53
MIR548F3-201ENST00000408509 DAAM2Q86T65 1068 aa-0.78□□□□□ -2.53
MIR548F3-201ENST00000408509 DCP2Q8IU60 420 aaKnown RBP-0.78□□□□□ -2.53
MIR548F3-201ENST00000408509 SYT12Q8IV01 421 aa-0.78□□□□□ -2.53
MIR548F3-201ENST00000408509 LARGE2Q8N3Y3 721 aa-0.78□□□□□ -2.53
MIR548F3-201ENST00000408509 OGFOD1Q8N543 542 aa-0.78□□□□□ -2.53
MIR548F3-201ENST00000408509 TOE1Q96GM8 510 aaKnown RBP-0.78□□□□□ -2.53
MIR548F3-201ENST00000408509 NODALQ96S42 347 aa-0.78□□□□□ -2.53
MIR548F3-201ENST00000408509 GNL3Q9BVP2 549 aaKnown RBP eCLIP-0.78□□□□□ -2.53
MIR548F3-201ENST00000408509 SAP130Q9H0E3 1048 aa-0.78□□□□□ -2.53
MIR548F3-201ENST00000408509 RMI1Q9H9A7 625 aa-0.78□□□□□ -2.53
MIR548F3-201ENST00000408509 SDF2L1Q9HCN8 221 aa-0.78□□□□□ -2.53
MIR548F3-201ENST00000408509 TCF7L2Q9NQB0 619 aa-0.78□□□□□ -2.53
MIR548F3-201ENST00000408509 POT1Q9NUX5 634 aa-0.78□□□□□ -2.53
MIR548F3-201ENST00000408509 TRPM5Q9NZQ8 1165 aa-0.78□□□□□ -2.53
MIR548F3-201ENST00000408509 FOXD3Q9UJU5 478 aaPredicted RBP-0.78□□□□□ -2.53
MIR548F3-201ENST00000408509 AGRNO00468 2067 aa-0.79□□□□□ -2.54
MIR548F3-201ENST00000408509 SCN5AQ14524 2016 aa-0.79□□□□□ -2.54
MIR548F3-201ENST00000408509 ESYT3A0FGR9 886 aa-0.79□□□□□ -2.54
MIR548F3-201ENST00000408509 FOXO3O43524 673 aa-0.79□□□□□ -2.54
MIR548F3-201ENST00000408509 TRIM37O94972 964 aa-0.79□□□□□ -2.54
MIR548F3-201ENST00000408509 CHGBP05060 677 aa-0.79□□□□□ -2.54
MIR548F3-201ENST00000408509 PRKCSHP14314 528 aaPredicted RBP-0.79□□□□□ -2.54
MIR548F3-201ENST00000408509 HNRNPLP14866 589 aaKnown RBP eCLIP-0.79□□□□□ -2.54
MIR548F3-201ENST00000408509 FDXRP22570 491 aa-0.79□□□□□ -2.54
MIR548F3-201ENST00000408509 RFC5P40937 340 aa-0.79□□□□□ -2.54
MIR548F3-201ENST00000408509 RBMS2Q15434 407 aaKnown RBP-0.79□□□□□ -2.54
MIR548F3-201ENST00000408509 LARP1BQ659C4 914 aaKnown RBP-0.79□□□□□ -2.54
MIR548F3-201ENST00000408509 PMS2CLQ68D20 193 aa-0.79□□□□□ -2.54
MIR548F3-201ENST00000408509 KLHDC10Q6PID8 442 aa-0.79□□□□□ -2.54
MIR548F3-201ENST00000408509 BCL6BQ8N143 479 aaPredicted RBP-0.79□□□□□ -2.54
MIR548F3-201ENST00000408509 MUC20Q8N307 709 aaPredicted RBP-0.79□□□□□ -2.54
MIR548F3-201ENST00000408509 CYB5D2Q8WUJ1 264 aa-0.79□□□□□ -2.54
MIR548F3-201ENST00000408509 ATP2A3Q93084 1043 aa-0.79□□□□□ -2.54
MIR548F3-201ENST00000408509 MRPL44Q9H9J2 332 aaKnown RBP-0.79□□□□□ -2.54
MIR548F3-201ENST00000408509 RTN4Q9NQC3 1192 aaKnown RBP-0.79□□□□□ -2.54
MIR548F3-201ENST00000408509 ZFP69BQ9UJL9 534 aa-0.79□□□□□ -2.54
MIR548F3-201ENST00000408509 NDUFB9Q9Y6M9 179 aa-0.79□□□□□ -2.54
MIR548F3-201ENST00000408509 MEIOCA2RUB1 952 aa-0.8□□□□□ -2.54
MIR548F3-201ENST00000408509 C2orf71A6NGG8 1288 aa-0.8□□□□□ -2.54
MIR548F3-201ENST00000408509 IFNL4K9M1U5 179 aa-0.8□□□□□ -2.54
MIR548F3-201ENST00000408509 PPP1R11O60927 126 aaPredicted RBP-0.8□□□□□ -2.54
MIR548F3-201ENST00000408509 TNFRSF21O75509 655 aa-0.8□□□□□ -2.54
MIR548F3-201ENST00000408509 SPDEFO95238 335 aa-0.8□□□□□ -2.54
MIR548F3-201ENST00000408509 PAPSS2O95340 614 aaPredicted RBP-0.8□□□□□ -2.54
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms