RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 ZNF891A8MT65 544 aaPredicted RBP6.53□□□□□ -1.36
HMGB1P13-201ENST00000406019 TPD52L2O43399 206 aaKnown RBP6.53□□□□□ -1.36
HMGB1P13-201ENST00000406019 LAMTOR5O43504 91 aa6.53□□□□□ -1.36
HMGB1P13-201ENST00000406019 CUTAO60888 179 aa6.53□□□□□ -1.36
HMGB1P13-201ENST00000406019 ATP2A2P16615 1042 aaKnown RBP6.53□□□□□ -1.36
HMGB1P13-201ENST00000406019 ADCYAP1R1P41586 468 aa6.53□□□□□ -1.36
HMGB1P13-201ENST00000406019 CD83Q01151 205 aa6.53□□□□□ -1.36
HMGB1P13-201ENST00000406019 ALDH6A1Q02252 535 aaKnown RBP6.53□□□□□ -1.36
HMGB1P13-201ENST00000406019 TMEM132BQ14DG7 1078 aa6.53□□□□□ -1.36
HMGB1P13-201ENST00000406019 ESRP1Q6NXG1 681 aaKnown RBP6.53□□□□□ -1.36
HMGB1P13-201ENST00000406019 DPP8Q6V1X1 898 aaPredicted RBP6.53□□□□□ -1.36
HMGB1P13-201ENST00000406019 GPR155Q7Z3F1 870 aa6.53□□□□□ -1.36
HMGB1P13-201ENST00000406019 FOXB1Q99853 325 aa6.53□□□□□ -1.36
HMGB1P13-201ENST00000406019 RTFDC1Q9BY42 306 aaPredicted RBP6.53□□□□□ -1.36
HMGB1P13-201ENST00000406019 TNKSO95271 1327 aa6.52□□□□□ -1.37
HMGB1P13-201ENST00000406019 HIP1RO75146 1068 aa6.52□□□□□ -1.37
HMGB1P13-201ENST00000406019 PEX14O75381 377 aa6.52□□□□□ -1.37
HMGB1P13-201ENST00000406019 PRKD3O94806 890 aa6.52□□□□□ -1.37
HMGB1P13-201ENST00000406019 APPP05067 770 aa6.52□□□□□ -1.37
HMGB1P13-201ENST00000406019 CELA3BP08861 270 aa6.52□□□□□ -1.37
HMGB1P13-201ENST00000406019 PTX3P26022 381 aaPredicted RBP6.52□□□□□ -1.37
HMGB1P13-201ENST00000406019 KIF11P52732 1056 aa6.52□□□□□ -1.37
HMGB1P13-201ENST00000406019 EIF4HQ15056 248 aaKnown RBP6.52□□□□□ -1.37
HMGB1P13-201ENST00000406019 TRIM68Q6AZZ1 485 aa6.52□□□□□ -1.37
HMGB1P13-201ENST00000406019 LARP4Q71RC2 724 aaKnown RBP eCLIP6.52□□□□□ -1.37
HMGB1P13-201ENST00000406019 PLEKHH3Q7Z736 793 aa6.52□□□□□ -1.37
HMGB1P13-201ENST00000406019 PASD1Q8IV76 773 aa6.52□□□□□ -1.37
HMGB1P13-201ENST00000406019 CHPFQ8IZ52 775 aa6.52□□□□□ -1.37
HMGB1P13-201ENST00000406019 NXPE1Q8N323 547 aa6.52□□□□□ -1.37
HMGB1P13-201ENST00000406019 KIAA1958Q8N8K9 716 aa6.52□□□□□ -1.37
HMGB1P13-201ENST00000406019 HOOK2Q96ED9 719 aa6.52□□□□□ -1.37
HMGB1P13-201ENST00000406019 SMAD5Q99717 465 aaKnown RBP6.52□□□□□ -1.37
HMGB1P13-201ENST00000406019 PTPN18Q99952 460 aa6.52□□□□□ -1.37
HMGB1P13-201ENST00000406019 LOC102724159A0A0B4J2E5 919 aa6.51□□□□□ -1.37
HMGB1P13-201ENST00000406019 GPR42O15529 346 aa6.51□□□□□ -1.37
HMGB1P13-201ENST00000406019 KRT37O76014 449 aa6.51□□□□□ -1.37
HMGB1P13-201ENST00000406019 ABLIM3O94929 683 aa6.51□□□□□ -1.37
HMGB1P13-201ENST00000406019 FKBP9O95302 570 aa6.51□□□□□ -1.37
HMGB1P13-201ENST00000406019 PRLP01236 227 aa6.51□□□□□ -1.37
HMGB1P13-201ENST00000406019 LSSP48449 732 aa6.51□□□□□ -1.37
HMGB1P13-201ENST00000406019 USP10Q14694 798 aaKnown RBP6.51□□□□□ -1.37
HMGB1P13-201ENST00000406019 PWP2Q15269 919 aaKnown RBP6.51□□□□□ -1.37
HMGB1P13-201ENST00000406019 EPHA7Q15375 998 aa6.51□□□□□ -1.37
HMGB1P13-201ENST00000406019 INAVAQ3KP66 663 aa6.51□□□□□ -1.37
HMGB1P13-201ENST00000406019 NXNQ6DKJ4 435 aa6.51□□□□□ -1.37
HMGB1P13-201ENST00000406019 FKBP9P1Q75LS8 142 aa6.51□□□□□ -1.37
HMGB1P13-201ENST00000406019 RALYLQ86SE5 291 aaKnown RBP6.51□□□□□ -1.37
HMGB1P13-201ENST00000406019 MYO1HQ8N1T3 1032 aa6.51□□□□□ -1.37
HMGB1P13-201ENST00000406019 CBARPQ8N350 705 aaPredicted RBP6.51□□□□□ -1.37
HMGB1P13-201ENST00000406019 DNERQ8NFT8 737 aa6.51□□□□□ -1.37
HMGB1P13-201ENST00000406019 ELF4Q99607 663 aaPredicted RBP6.51□□□□□ -1.37
HMGB1P13-201ENST00000406019 ZMAT4Q9H898 229 aa6.51□□□□□ -1.37
HMGB1P13-201ENST00000406019 CABP5Q9NP86 173 aa6.51□□□□□ -1.37
HMGB1P13-201ENST00000406019 ACSS2Q9NR19 701 aa6.51□□□□□ -1.37
HMGB1P13-201ENST00000406019 OXSMQ9NWU1 459 aa6.51□□□□□ -1.37
HMGB1P13-201ENST00000406019 H2AFY2Q9P0M6 372 aaPredicted RBP6.51□□□□□ -1.37
HMGB1P13-201ENST00000406019 MATN2O00339 956 aa6.5□□□□□ -1.37
HMGB1P13-201ENST00000406019 RFPL1O75677 317 aa6.5□□□□□ -1.37
HMGB1P13-201ENST00000406019 ADCY8P40145 1251 aa6.5□□□□□ -1.37
HMGB1P13-201ENST00000406019 ERVK-21P61565 698 aa6.5□□□□□ -1.37
HMGB1P13-201ENST00000406019 PPP2CBP62714 309 aa6.5□□□□□ -1.37
HMGB1P13-201ENST00000406019 PPP2CAP67775 309 aa6.5□□□□□ -1.37
HMGB1P13-201ENST00000406019 SURF1Q15526 300 aa6.5□□□□□ -1.37
HMGB1P13-201ENST00000406019 TBR1Q16650 682 aa6.5□□□□□ -1.37
HMGB1P13-201ENST00000406019 WDR72Q3MJ13 1102 aa6.5□□□□□ -1.37
HMGB1P13-201ENST00000406019 MAP9Q49MG5 647 aa6.5□□□□□ -1.37
HMGB1P13-201ENST00000406019 ZBTB46Q86UZ6 589 aa6.5□□□□□ -1.37
HMGB1P13-201ENST00000406019 TCEAL8Q8IYN2 117 aa6.5□□□□□ -1.37
HMGB1P13-201ENST00000406019 HIPK4Q8NE63 616 aa6.5□□□□□ -1.37
HMGB1P13-201ENST00000406019 TTC8Q8TAM2 541 aa6.5□□□□□ -1.37
HMGB1P13-201ENST00000406019 PMM1Q92871 262 aa6.5□□□□□ -1.37
HMGB1P13-201ENST00000406019 FBXO10Q9UK96 956 aa6.5□□□□□ -1.37
HMGB1P13-201ENST00000406019 SPO11Q9Y5K1 396 aa6.5□□□□□ -1.37
HMGB1P13-201ENST00000406019 H7C1D1 291 aa6.49□□□□□ -1.37
HMGB1P13-201ENST00000406019 TGM5O43548 720 aa6.49□□□□□ -1.37
HMGB1P13-201ENST00000406019 GAS7O60861 476 aa6.49□□□□□ -1.37
HMGB1P13-201ENST00000406019 CAND2O75155 1236 aa6.49□□□□□ -1.37
HMGB1P13-201ENST00000406019 IL2P60568 153 aa6.49□□□□□ -1.37
HMGB1P13-201ENST00000406019 PLP2Q04941 152 aa6.49□□□□□ -1.37
HMGB1P13-201ENST00000406019 MOGSQ13724 837 aa6.49□□□□□ -1.37
HMGB1P13-201ENST00000406019 HLTFQ14527 1009 aaKnown RBP eCLIP6.49□□□□□ -1.37
HMGB1P13-201ENST00000406019 SART3Q15020 963 aaKnown RBP6.49□□□□□ -1.37
HMGB1P13-201ENST00000406019 FAM102BQ5T8I3 360 aa6.49□□□□□ -1.37
HMGB1P13-201ENST00000406019 LIMS2Q7Z4I7 341 aa6.49□□□□□ -1.37
HMGB1P13-201ENST00000406019 C14orf80Q86SX3 495 aa6.49□□□□□ -1.37
HMGB1P13-201ENST00000406019 CFHR4Q92496 578 aa6.49□□□□□ -1.37
HMGB1P13-201ENST00000406019 PSMD1Q99460 953 aa6.49□□□□□ -1.37
HMGB1P13-201ENST00000406019 CARD11Q9BXL7 1154 aa6.49□□□□□ -1.37
HMGB1P13-201ENST00000406019 RHOBTB2Q9BYZ6 727 aa6.49□□□□□ -1.37
HMGB1P13-201ENST00000406019 HAPLN2Q9GZV7 340 aa6.49□□□□□ -1.37
HMGB1P13-201ENST00000406019 SEC61A2Q9H9S3 476 aa6.49□□□□□ -1.37
HMGB1P13-201ENST00000406019 EMC7Q9NPA0 242 aa6.49□□□□□ -1.37
HMGB1P13-201ENST00000406019 AASDHPPTQ9NRN7 309 aa6.49□□□□□ -1.37
HMGB1P13-201ENST00000406019 ZDHHC9Q9Y397 364 aa6.49□□□□□ -1.37
HMGB1P13-201ENST00000406019 K7ESM1 405 aa6.48□□□□□ -1.37
HMGB1P13-201ENST00000406019 FZD9O00144 591 aa6.48□□□□□ -1.37
HMGB1P13-201ENST00000406019 B4GALT4O60513 344 aa6.48□□□□□ -1.37
HMGB1P13-201ENST00000406019 CYP17A1P05093 508 aa6.48□□□□□ -1.37
HMGB1P13-201ENST00000406019 SLC9A1P19634 815 aa6.48□□□□□ -1.37
HMGB1P13-201ENST00000406019 RGS3P49796 1198 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms