RNA–Protein interactions for RNA: ENST00000404933.6

SMS-202, Transcript of spermine synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMS, Length 1,837 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMS-202ENST00000404933 TMCO3Q6UWJ1 677 aa12.96□□□□□ -0.33
SMS-202ENST00000404933 KSR1Q8IVT5 923 aa12.96□□□□□ -0.33
SMS-202ENST00000404933 FAM186BQ8IYM0 893 aa12.96□□□□□ -0.33
SMS-202ENST00000404933 FAM133AQ8N9E0 248 aa12.96□□□□□ -0.33
SMS-202ENST00000404933 BAP1Q92560 729 aa12.96□□□□□ -0.33
SMS-202ENST00000404933 ZNF446Q9NWS9 450 aa12.96□□□□□ -0.33
SMS-202ENST00000404933 SOWAHBA6NEL2 793 aa12.95□□□□□ -0.34
SMS-202ENST00000404933 LRRC53A6NM62 1247 aa12.95□□□□□ -0.34
SMS-202ENST00000404933 EIF3CLB5ME19 914 aaKnown RBP12.95□□□□□ -0.34
SMS-202ENST00000404933 ZNF862O60290 1169 aa12.95□□□□□ -0.34
SMS-202ENST00000404933 CYP2C19P33261 490 aa12.95□□□□□ -0.34
SMS-202ENST00000404933 CASP4P49662 377 aa12.95□□□□□ -0.34
SMS-202ENST00000404933 SMTNP53814 917 aa12.95□□□□□ -0.34
SMS-202ENST00000404933 SNRPFP62306 86 aaKnown RBP12.95□□□□□ -0.34
SMS-202ENST00000404933 SP4Q02446 784 aa12.95□□□□□ -0.34
SMS-202ENST00000404933 TUBB2AQ13885 445 aa12.95□□□□□ -0.34
SMS-202ENST00000404933 DCAF17Q5H9S7 520 aaPredicted RBP12.95□□□□□ -0.34
SMS-202ENST00000404933 FAM102BQ5T8I3 360 aa12.95□□□□□ -0.34
SMS-202ENST00000404933 GPAT2Q6NUI2 795 aa12.95□□□□□ -0.34
SMS-202ENST00000404933 PDXDC1Q6P996 788 aa12.95□□□□□ -0.34
SMS-202ENST00000404933 SEPT14Q6ZU15 432 aa12.95□□□□□ -0.34
SMS-202ENST00000404933 HAUS6Q7Z4H7 955 aa12.95□□□□□ -0.34
SMS-202ENST00000404933 TMEM174Q8WUU8 243 aa12.95□□□□□ -0.34
SMS-202ENST00000404933 SYN2Q92777 582 aaPredicted RBP12.95□□□□□ -0.34
SMS-202ENST00000404933 KIFAP3Q92845 792 aa12.95□□□□□ -0.34
SMS-202ENST00000404933 CEP170P1Q96L14 293 aa12.95□□□□□ -0.34
SMS-202ENST00000404933 CCDC42Q96M95 316 aa12.95□□□□□ -0.34
SMS-202ENST00000404933 EIF3CQ99613 913 aaKnown RBP12.95□□□□□ -0.34
SMS-202ENST00000404933 SH2D3AQ9BRG2 576 aa12.95□□□□□ -0.34
SMS-202ENST00000404933 CRACR2AQ9BSW2 395 aa12.95□□□□□ -0.34
SMS-202ENST00000404933 TUBB2BQ9BVA1 445 aa12.95□□□□□ -0.34
SMS-202ENST00000404933 C17orf75Q9HAS0 396 aa12.95□□□□□ -0.34
SMS-202ENST00000404933 PLCB1Q9NQ66 1216 aa12.95□□□□□ -0.34
SMS-202ENST00000404933 MYO1AQ9UBC5 1043 aa12.95□□□□□ -0.34
SMS-202ENST00000404933 RBPJLQ9UBG7 517 aa12.95□□□□□ -0.34
SMS-202ENST00000404933 FHOD1Q9Y613 1164 aa12.95□□□□□ -0.34
SMS-202ENST00000404933 IGSF9BQ9UPX0 1349 aa12.95□□□□□ -0.34
SMS-202ENST00000404933 LRRC37A2A6NM11 1700 aa12.95□□□□□ -0.34
SMS-202ENST00000404933 NOL4O94818 638 aa12.95□□□□□ -0.34
SMS-202ENST00000404933 STBD1O95210 358 aa12.95□□□□□ -0.34
SMS-202ENST00000404933 ATG7O95352 703 aa12.95□□□□□ -0.34
SMS-202ENST00000404933 NCKAP1LP55160 1127 aa12.95□□□□□ -0.34
SMS-202ENST00000404933 PEX3P56589 373 aa12.95□□□□□ -0.34
SMS-202ENST00000404933 GTF2BQ00403 316 aa12.95□□□□□ -0.34
SMS-202ENST00000404933 SP2Q02086 613 aa12.95□□□□□ -0.34
SMS-202ENST00000404933 SLC20A2Q08357 652 aa12.95□□□□□ -0.34
SMS-202ENST00000404933 FSTL1Q12841 308 aa12.95□□□□□ -0.34
SMS-202ENST00000404933 XKR3Q5GH77 459 aa12.95□□□□□ -0.34
SMS-202ENST00000404933 TCERG1LQ5VWI1 586 aa12.95□□□□□ -0.34
SMS-202ENST00000404933 ZNF662Q6ZS27 426 aa12.95□□□□□ -0.34
SMS-202ENST00000404933 CYFIP1Q7L576 1253 aa12.95□□□□□ -0.34
SMS-202ENST00000404933 TRMT1LQ7Z2T5 733 aaKnown RBP12.95□□□□□ -0.34
SMS-202ENST00000404933 CCDC60Q8IWA6 550 aaPredicted RBP12.95□□□□□ -0.34
SMS-202ENST00000404933 GPR161Q8N6U8 529 aaKnown RBP12.95□□□□□ -0.34
SMS-202ENST00000404933 MNS1Q8NEH6 495 aa12.95□□□□□ -0.34
SMS-202ENST00000404933 MCPH1Q8NEM0 835 aa12.95□□□□□ -0.34
SMS-202ENST00000404933 GTF3C2Q8WUA4 911 aaPredicted RBP12.95□□□□□ -0.34
SMS-202ENST00000404933 SLC35C1Q96A29 364 aa12.95□□□□□ -0.34
SMS-202ENST00000404933 HVCN1Q96D96 273 aa12.95□□□□□ -0.34
SMS-202ENST00000404933 BORCS6Q96GS4 357 aa12.95□□□□□ -0.34
SMS-202ENST00000404933 WDR24Q96S15 920 aa12.95□□□□□ -0.34
SMS-202ENST00000404933 HAUS4Q9H6D7 363 aa12.95□□□□□ -0.34
SMS-202ENST00000404933 PNMA3Q9UL41 463 aa12.95□□□□□ -0.34
SMS-202ENST00000404933 REXO2Q9Y3B8 237 aaKnown RBP12.95□□□□□ -0.34
SMS-202ENST00000404933 GTPBP10A4D1E9 387 aaKnown RBP12.94□□□□□ -0.34
SMS-202ENST00000404933 DGAT1O75907 488 aa12.94□□□□□ -0.34
SMS-202ENST00000404933 URI1O94763 535 aaPredicted RBP12.94□□□□□ -0.34
SMS-202ENST00000404933 PNMA6AP0CW24 399 aaPredicted RBP12.94□□□□□ -0.34
SMS-202ENST00000404933 TGFB3P10600 412 aa12.94□□□□□ -0.34
SMS-202ENST00000404933 GJA5P36382 358 aa12.94□□□□□ -0.34
SMS-202ENST00000404933 CYP2J2P51589 502 aa12.94□□□□□ -0.34
SMS-202ENST00000404933 CLCN6P51797 869 aa12.94□□□□□ -0.34
SMS-202ENST00000404933 POLR2FP61218 127 aaKnown RBP12.94□□□□□ -0.34
SMS-202ENST00000404933 PRKCEQ02156 737 aa12.94□□□□□ -0.34
SMS-202ENST00000404933 DMP1Q13316 513 aaPredicted RBP12.94□□□□□ -0.34
SMS-202ENST00000404933 NEDD9Q14511 834 aa12.94□□□□□ -0.34
SMS-202ENST00000404933 KCTD2Q14681 263 aa12.94□□□□□ -0.34
SMS-202ENST00000404933 PPP2R5AQ15172 486 aa12.94□□□□□ -0.34
SMS-202ENST00000404933 EXOC3L4Q17RC7 722 aa12.94□□□□□ -0.34
SMS-202ENST00000404933 ERCC6LQ2NKX8 1250 aa12.94□□□□□ -0.34
SMS-202ENST00000404933 GBP6Q6ZN66 633 aa12.94□□□□□ -0.34
SMS-202ENST00000404933 C12orf56Q8IXR9 622 aa12.94□□□□□ -0.34
SMS-202ENST00000404933 MSL3Q8N5Y2 521 aaKnown RBP12.94□□□□□ -0.34
SMS-202ENST00000404933 UBXN6Q9BZV1 441 aa12.94□□□□□ -0.34
SMS-202ENST00000404933 IKZF4Q9H2S9 585 aa12.94□□□□□ -0.34
SMS-202ENST00000404933 MROH8Q9H579 483 aa12.94□□□□□ -0.34
SMS-202ENST00000404933 TXNRD2Q9NNW7 524 aa12.94□□□□□ -0.34
SMS-202ENST00000404933 GPRC5CQ9NQ84 441 aa12.94□□□□□ -0.34
SMS-202ENST00000404933 SEPT9Q9UHD8 586 aaPredicted RBP12.94□□□□□ -0.34
SMS-202ENST00000404933 EXOC7Q9UPT5 735 aa12.94□□□□□ -0.34
SMS-202ENST00000404933 ZNFX1Q9P2E3 1918 aaKnown RBP12.93□□□□□ -0.34
SMS-202ENST00000404933 A0A0U1RQJ8 604 aa12.93□□□□□ -0.34
SMS-202ENST00000404933 SLC16A4O15374 487 aa12.93□□□□□ -0.34
SMS-202ENST00000404933 EXOC3O60645 756 aa12.93□□□□□ -0.34
SMS-202ENST00000404933 TADA3O75528 432 aa12.93□□□□□ -0.34
SMS-202ENST00000404933 UBA1P22314 1058 aaKnown RBP12.93□□□□□ -0.34
SMS-202ENST00000404933 ARHGAP25P42331 645 aa12.93□□□□□ -0.34
SMS-202ENST00000404933 RTP1P59025 263 aa12.93□□□□□ -0.34
SMS-202ENST00000404933 SPA17Q15506 151 aa12.93□□□□□ -0.34
SMS-202ENST00000404933 SFMBT2Q5VUG0 894 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms