RNA–Protein interactions for RNA: ENST00000404040.5

HDAC11-204, Transcript of histone deacetylase 11, humanhuman

TSL 3 BASIC

Gene HDAC11, Length 967 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-204ENST00000404040 ATP6V0A4Q9HBG4 840 aa20.28■□□□□ 0.84
HDAC11-204ENST00000404040 ZNF302Q9NR11 478 aa20.28■□□□□ 0.84
HDAC11-204ENST00000404040 FAM217BQ9NTX9 383 aaPredicted RBP20.28■□□□□ 0.84
HDAC11-204ENST00000404040 hCG_1984214I3L0E3 225 aa20.27■□□□□ 0.84
HDAC11-204ENST00000404040 C22orf31O95567 290 aa20.27■□□□□ 0.84
HDAC11-204ENST00000404040 CRYBB1P53674 252 aaPredicted RBP20.27■□□□□ 0.84
HDAC11-204ENST00000404040 ME3Q16798 604 aa20.27■□□□□ 0.84
HDAC11-204ENST00000404040 KIZQ2M2Z5 673 aa20.27■□□□□ 0.84
HDAC11-204ENST00000404040 ANKRD54Q6NXT1 300 aa20.27■□□□□ 0.84
HDAC11-204ENST00000404040 PDXDC2PQ6P474 469 aa20.27■□□□□ 0.84
HDAC11-204ENST00000404040 ZNF713Q8N859 430 aaPredicted RBP20.27■□□□□ 0.84
HDAC11-204ENST00000404040 MRPS27Q92552 414 aaKnown RBP20.27■□□□□ 0.84
HDAC11-204ENST00000404040 RNF26Q9BY78 433 aaPredicted RBP20.27■□□□□ 0.84
HDAC11-204ENST00000404040 ELAC1Q9H777 363 aaKnown RBP20.27■□□□□ 0.84
HDAC11-204ENST00000404040 TECP42680 631 aa20.26■□□□□ 0.83
HDAC11-204ENST00000404040 CLK2P49760 499 aaKnown RBP20.26■□□□□ 0.83
HDAC11-204ENST00000404040 FAM189BP81408 668 aa20.26■□□□□ 0.83
HDAC11-204ENST00000404040 PLCB3Q01970 1234 aa20.26■□□□□ 0.83
HDAC11-204ENST00000404040 FUT2Q10981 343 aa20.26■□□□□ 0.83
HDAC11-204ENST00000404040 SCRN1Q12765 414 aa20.26■□□□□ 0.83
HDAC11-204ENST00000404040 DSC3Q14574 896 aa20.26■□□□□ 0.83
HDAC11-204ENST00000404040 MIS18BP1Q6P0N0 1132 aa20.26■□□□□ 0.83
HDAC11-204ENST00000404040 SYCE2Q6PIF2 218 aa20.26■□□□□ 0.83
HDAC11-204ENST00000404040 GTF3C6Q969F1 213 aa20.26■□□□□ 0.83
HDAC11-204ENST00000404040 SNX27Q96L92 541 aa20.26■□□□□ 0.83
HDAC11-204ENST00000404040 TCF25Q9BQ70 676 aa20.26■□□□□ 0.83
HDAC11-204ENST00000404040 TMEM117Q9H0C3 514 aa20.26■□□□□ 0.83
HDAC11-204ENST00000404040 ENTPD7Q9NQZ7 604 aa20.26■□□□□ 0.83
HDAC11-204ENST00000404040 FAM86B1E9PN63 330 aa20.25■□□□□ 0.83
HDAC11-204ENST00000404040 DHX15O43143 795 aaKnown RBP20.25■□□□□ 0.83
HDAC11-204ENST00000404040 PRPF3O43395 683 aaKnown RBP20.25■□□□□ 0.83
HDAC11-204ENST00000404040 GPR32O75388 356 aa20.25■□□□□ 0.83
HDAC11-204ENST00000404040 FAM86B2P0C5J1 330 aa20.25■□□□□ 0.83
HDAC11-204ENST00000404040 ATP4AP20648 1035 aa20.25■□□□□ 0.83
HDAC11-204ENST00000404040 LRRC43Q8N309 656 aa20.25■□□□□ 0.83
HDAC11-204ENST00000404040 NCOA5Q9HCD5 579 aaKnown RBP20.25■□□□□ 0.83
HDAC11-204ENST00000404040 RNF19AQ9NV58 838 aa20.25■□□□□ 0.83
HDAC11-204ENST00000404040 FAM86C1Q9NVL1 165 aa20.25■□□□□ 0.83
HDAC11-204ENST00000404040 IGLV3-22A0A075B6J6 115 aa20.24■□□□□ 0.83
HDAC11-204ENST00000404040 SMCO2A6NFE2 343 aa20.24■□□□□ 0.83
HDAC11-204ENST00000404040 HIDE1A8MVS5 230 aa20.24■□□□□ 0.83
HDAC11-204ENST00000404040 HOXA2O43364 376 aa20.24■□□□□ 0.83
HDAC11-204ENST00000404040 VTNP04004 478 aa20.24■□□□□ 0.83
HDAC11-204ENST00000404040 PPM1AP35813 382 aa20.24■□□□□ 0.83
HDAC11-204ENST00000404040 ZNF76P36508 570 aa20.24■□□□□ 0.83
HDAC11-204ENST00000404040 SSRP1Q08945 709 aaKnown RBP20.24■□□□□ 0.83
HDAC11-204ENST00000404040 NTRK3Q16288 839 aa20.24■□□□□ 0.83
HDAC11-204ENST00000404040 SWSAP1Q6NVH7 229 aa20.24■□□□□ 0.83
HDAC11-204ENST00000404040 LLGL2Q6P1M3 1020 aa20.24■□□□□ 0.83
HDAC11-204ENST00000404040 PLA2G4DQ86XP0 818 aa20.24■□□□□ 0.83
HDAC11-204ENST00000404040 BBXQ8WY36 941 aaPredicted RBP20.24■□□□□ 0.83
HDAC11-204ENST00000404040 APOL5Q9BWW9 433 aa20.24■□□□□ 0.83
HDAC11-204ENST00000404040 GLT8D2Q9H1C3 349 aa20.24■□□□□ 0.83
HDAC11-204ENST00000404040 NGRNQ9NPE2 291 aaKnown RBP20.24■□□□□ 0.83
HDAC11-204ENST00000404040 BARHL2Q9NY43 387 aa20.24■□□□□ 0.83
HDAC11-204ENST00000404040 PUF60Q9UHX1 559 aaKnown RBP20.24■□□□□ 0.83
HDAC11-204ENST00000404040 V9GY48 417 aaPredicted RBP20.24■□□□□ 0.83
HDAC11-204ENST00000404040 C2orf16Q68DN1 1984 aa20.23■□□□□ 0.83
HDAC11-204ENST00000404040 IPO5O00410 1097 aaKnown RBP20.23■□□□□ 0.83
HDAC11-204ENST00000404040 GFRA3O60609 400 aa20.23■□□□□ 0.83
HDAC11-204ENST00000404040 HOXB8P17481 243 aaPredicted RBP20.23■□□□□ 0.83
HDAC11-204ENST00000404040 SP100P23497 879 aaPredicted RBP20.23■□□□□ 0.83
HDAC11-204ENST00000404040 AVPR2P30518 371 aa20.23■□□□□ 0.83
HDAC11-204ENST00000404040 KCNT2Q6UVM3 1135 aa20.23■□□□□ 0.83
HDAC11-204ENST00000404040 LRRC55Q6ZSA7 311 aa20.23■□□□□ 0.83
HDAC11-204ENST00000404040 ZBTB33Q86T24 672 aa20.23■□□□□ 0.83
HDAC11-204ENST00000404040 CKAP2LQ8IYA6 745 aa20.23■□□□□ 0.83
HDAC11-204ENST00000404040 CRYGNQ8WXF5 182 aa20.23■□□□□ 0.83
HDAC11-204ENST00000404040 ZNF558Q96NG5 402 aa20.23■□□□□ 0.83
HDAC11-204ENST00000404040 CASD1Q96PB1 797 aa20.23■□□□□ 0.83
HDAC11-204ENST00000404040 LLPHQ9BRT6 129 aaKnown RBP20.23■□□□□ 0.83
HDAC11-204ENST00000404040 MAFBQ9Y5Q3 323 aaPredicted RBP20.23■□□□□ 0.83
HDAC11-204ENST00000404040 GVINP1Q7Z2Y8 2422 aa20.22■□□□□ 0.83
HDAC11-204ENST00000404040 DEXIO95424 95 aa20.22■□□□□ 0.83
HDAC11-204ENST00000404040 PBX3P40426 434 aa20.22■□□□□ 0.83
HDAC11-204ENST00000404040 PFKFB3Q16875 520 aaPredicted RBP20.22■□□□□ 0.83
HDAC11-204ENST00000404040 ZNF746Q6NUN9 644 aaPredicted RBP20.22■□□□□ 0.83
HDAC11-204ENST00000404040 FAM177A1Q8N128 213 aaPredicted RBP20.22■□□□□ 0.83
HDAC11-204ENST00000404040 METTL13Q8N6R0 699 aa20.22■□□□□ 0.83
HDAC11-204ENST00000404040 CCDC12Q8WUD4 166 aaPredicted RBP20.22■□□□□ 0.83
HDAC11-204ENST00000404040 WASF1Q92558 559 aa20.22■□□□□ 0.83
HDAC11-204ENST00000404040 SLC26A6Q9BXS9 759 aa20.22■□□□□ 0.83
HDAC11-204ENST00000404040 IRF2BPLQ9H1B7 796 aa20.22■□□□□ 0.83
HDAC11-204ENST00000404040 VPS13AQ96RL7 3174 aa20.22■□□□□ 0.83
HDAC11-204ENST00000404040 STK36Q9NRP7 1315 aa20.22■□□□□ 0.83
HDAC11-204ENST00000404040 LARGE1O95461 756 aa20.21■□□□□ 0.83
HDAC11-204ENST00000404040 PDGFBP01127 241 aaPredicted RBP20.21■□□□□ 0.83
HDAC11-204ENST00000404040 CYP3A4P08684 503 aa20.21■□□□□ 0.83
HDAC11-204ENST00000404040 CLCN3P51790 818 aa20.21■□□□□ 0.83
HDAC11-204ENST00000404040 SMAP1Q8IYB5 467 aaPredicted RBP20.21■□□□□ 0.83
HDAC11-204ENST00000404040 ABI1Q8IZP0 508 aa20.21■□□□□ 0.83
HDAC11-204ENST00000404040 CASP10Q92851 521 aa20.21■□□□□ 0.83
HDAC11-204ENST00000404040 CDH22Q9UJ99 828 aa20.21■□□□□ 0.83
HDAC11-204ENST00000404040 CEP131Q9UPN4 1083 aa20.21■□□□□ 0.83
HDAC11-204ENST00000404040 NR2E1Q9Y466 385 aa20.21■□□□□ 0.83
HDAC11-204ENST00000404040 NUBP1P53384 320 aa20.2■□□□□ 0.82
HDAC11-204ENST00000404040 SETQ01105 290 aaPredicted RBP20.2■□□□□ 0.82
HDAC11-204ENST00000404040 KRT17Q04695 432 aa20.2■□□□□ 0.82
HDAC11-204ENST00000404040 TPRNQ4KMQ1 711 aa20.2■□□□□ 0.82
HDAC11-204ENST00000404040 JAKMIP3Q5VZ66 844 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms