RNA–Protein interactions for RNA: ENST00000402434.6

RTN4-207, Transcript of reticulon 4, humanhuman

TSL 5 BASIC

Gene RTN4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-207ENST00000402434 TSPYL2Q9H2G4 693 aaPredicted RBP21.41■■□□□ 1.02
RTN4-207ENST00000402434 MTMR10Q9NXD2 777 aa21.41■■□□□ 1.02
RTN4-207ENST00000402434 ST3GAL5Q9UNP4 418 aa21.41■■□□□ 1.02
RTN4-207ENST00000402434 DARSP14868 501 aaKnown RBP21.4■■□□□ 1.02
RTN4-207ENST00000402434 NFX1Q12986 1120 aaKnown RBP21.4■■□□□ 1.02
RTN4-207ENST00000402434 FAM228AQ86W67 206 aa21.4■■□□□ 1.02
RTN4-207ENST00000402434 RHPN2Q8IUC4 686 aa21.4■■□□□ 1.02
RTN4-207ENST00000402434 MYOCDQ8IZQ8 938 aa21.4■■□□□ 1.02
RTN4-207ENST00000402434 TCP11Q8WWU5 503 aa21.4■■□□□ 1.02
RTN4-207ENST00000402434 PRPF31Q8WWY3 499 aaKnown RBP21.4■■□□□ 1.02
RTN4-207ENST00000402434 LINC01599Q8WXQ3 324 aa21.4■■□□□ 1.02
RTN4-207ENST00000402434 TMEM143Q96AN5 459 aa21.4■■□□□ 1.02
RTN4-207ENST00000402434 MMTAG2Q9BU76 263 aaKnown RBP21.4■■□□□ 1.02
RTN4-207ENST00000402434 ZNF576Q9H609 170 aa21.4■■□□□ 1.02
RTN4-207ENST00000402434 ARID2Q68CP9 1835 aa21.4■■□□□ 1.02
RTN4-207ENST00000402434 TTC3P53804 2025 aa21.4■■□□□ 1.02
RTN4-207ENST00000402434 MYO9BQ13459 2157 aa21.4■■□□□ 1.02
RTN4-207ENST00000402434 CHD9Q3L8U1 2897 aa21.4■■□□□ 1.02
RTN4-207ENST00000402434 VWA3AA6NCI4 1184 aa21.39■■□□□ 1.02
RTN4-207ENST00000402434 PP2D1A8MPX8 630 aa21.39■■□□□ 1.02
RTN4-207ENST00000402434 TLL1O43897 1013 aa21.39■■□□□ 1.02
RTN4-207ENST00000402434 CDC25AP30304 524 aa21.39■■□□□ 1.02
RTN4-207ENST00000402434 KRT79Q5XKE5 535 aa21.39■■□□□ 1.02
RTN4-207ENST00000402434 FAM173BQ6P4H8 233 aa21.39■■□□□ 1.02
RTN4-207ENST00000402434 CRIPAKQ8N1N5 446 aa21.39■■□□□ 1.02
RTN4-207ENST00000402434 SNX29Q8TEQ0 813 aa21.39■■□□□ 1.02
RTN4-207ENST00000402434 NLRP7Q8WX94 980 aa21.39■■□□□ 1.02
RTN4-207ENST00000402434 PSPC1Q8WXF1 523 aaKnown RBP21.39■■□□□ 1.02
RTN4-207ENST00000402434 ZNF668Q96K58 619 aaPredicted RBP21.39■■□□□ 1.02
RTN4-207ENST00000402434 MTRQ99707 1265 aa21.39■■□□□ 1.02
RTN4-207ENST00000402434 ZBED2Q9BTP6 218 aa21.39■■□□□ 1.02
RTN4-207ENST00000402434 NKX2-4Q9H2Z4 354 aa21.39■■□□□ 1.02
RTN4-207ENST00000402434 SLC28A3Q9HAS3 691 aa21.39■■□□□ 1.02
RTN4-207ENST00000402434 COL4A3BPQ9Y5P4 624 aa21.39■■□□□ 1.02
RTN4-207ENST00000402434 A0A087WZ62 844 aa21.39■■□□□ 1.01
RTN4-207ENST00000402434 ASAP2O43150 1006 aa21.39■■□□□ 1.01
RTN4-207ENST00000402434 HTRA4P83105 476 aaPredicted RBP21.39■■□□□ 1.01
RTN4-207ENST00000402434 PTPAQ15257 358 aa21.39■■□□□ 1.01
RTN4-207ENST00000402434 KSR1Q8IVT5 923 aa21.39■■□□□ 1.01
RTN4-207ENST00000402434 CCDC43Q96MW1 224 aaKnown RBP21.39■■□□□ 1.01
RTN4-207ENST00000402434 FDXACB1Q9BRP7 624 aaPredicted RBP21.39■■□□□ 1.01
RTN4-207ENST00000402434 GCOM2Q9BZD3 368 aaPredicted RBP21.39■■□□□ 1.01
RTN4-207ENST00000402434 ATP6V0A4Q9HBG4 840 aa21.39■■□□□ 1.01
RTN4-207ENST00000402434 BMP2KQ9NSY1 1161 aaPredicted RBP21.39■■□□□ 1.01
RTN4-207ENST00000402434 KIAA1024Q9UPX6 916 aa21.39■■□□□ 1.01
RTN4-207ENST00000402434 CLIC4Q9Y696 253 aa21.39■■□□□ 1.01
RTN4-207ENST00000402434 SLC34A2O95436 690 aa21.38■■□□□ 1.01
RTN4-207ENST00000402434 CA3P07451 260 aa21.38■■□□□ 1.01
RTN4-207ENST00000402434 LAMTOR4Q0VGL1 99 aa21.38■■□□□ 1.01
RTN4-207ENST00000402434 KCTD17Q8N5Z5 321 aa21.38■■□□□ 1.01
RTN4-207ENST00000402434 AK8Q96MA6 479 aa21.38■■□□□ 1.01
RTN4-207ENST00000402434 SCLT1Q96NL6 688 aa21.38■■□□□ 1.01
RTN4-207ENST00000402434 IFT122Q9HBG6 1241 aa21.38■■□□□ 1.01
RTN4-207ENST00000402434 DDX19AQ9NUU7 478 aaKnown RBP21.38■■□□□ 1.01
RTN4-207ENST00000402434 INSL6Q9Y581 213 aa21.38■■□□□ 1.01
RTN4-207ENST00000402434 MGEA5O60502 916 aa21.37■■□□□ 1.01
RTN4-207ENST00000402434 DSC3Q14574 896 aa21.37■■□□□ 1.01
RTN4-207ENST00000402434 MXD4Q14582 209 aaPredicted RBP21.37■■□□□ 1.01
RTN4-207ENST00000402434 HYIQ5T013 277 aa21.37■■□□□ 1.01
RTN4-207ENST00000402434 SPRYD3Q8NCJ5 442 aa21.37■■□□□ 1.01
RTN4-207ENST00000402434 NLRP4Q96MN2 994 aa21.37■■□□□ 1.01
RTN4-207ENST00000402434 FAM161BQ96MY7 647 aa21.37■■□□□ 1.01
RTN4-207ENST00000402434 INO80BQ9C086 356 aaPredicted RBP21.37■■□□□ 1.01
RTN4-207ENST00000402434 RGS18Q9NS28 235 aa21.37■■□□□ 1.01
RTN4-207ENST00000402434 ARL2P36404 184 aa21.36■■□□□ 1.01
RTN4-207ENST00000402434 POU5F1BQ06416 359 aa21.36■■□□□ 1.01
RTN4-207ENST00000402434 PPP2R2DQ66LE6 453 aa21.36■■□□□ 1.01
RTN4-207ENST00000402434 FAM117BQ6P1L5 589 aa21.36■■□□□ 1.01
RTN4-207ENST00000402434 PADI6Q6TGC4 694 aa21.36■■□□□ 1.01
RTN4-207ENST00000402434 GUCD1Q96NT3 240 aa21.36■■□□□ 1.01
RTN4-207ENST00000402434 ADAM2Q99965 735 aa21.36■■□□□ 1.01
RTN4-207ENST00000402434 MORC2Q9Y6X9 1032 aaPredicted RBP21.36■■□□□ 1.01
RTN4-207ENST00000402434 LCHNA4D1U4 455 aa21.35■■□□□ 1.01
RTN4-207ENST00000402434 USO1O60763 962 aaKnown RBP21.35■■□□□ 1.01
RTN4-207ENST00000402434 CSDE1O75534 798 aaKnown RBP21.35■■□□□ 1.01
RTN4-207ENST00000402434 UPP2O95045 317 aa21.35■■□□□ 1.01
RTN4-207ENST00000402434 ZSCAN22P10073 491 aaPredicted RBP21.35■■□□□ 1.01
RTN4-207ENST00000402434 LONP1P36776 959 aaKnown RBP21.35■■□□□ 1.01
RTN4-207ENST00000402434 TAP1Q03518 808 aa21.35■■□□□ 1.01
RTN4-207ENST00000402434 GRIN2CQ14957 1233 aa21.35■■□□□ 1.01
RTN4-207ENST00000402434 MCPH1Q8NEM0 835 aa21.35■■□□□ 1.01
RTN4-207ENST00000402434 BHMT2Q9H2M3 363 aa21.35■■□□□ 1.01
RTN4-207ENST00000402434 C1orf112Q9NSG2 853 aa21.35■■□□□ 1.01
RTN4-207ENST00000402434 DNM3Q9UQ16 869 aa21.35■■□□□ 1.01
RTN4-207ENST00000402434 CHD7Q9P2D1 2997 aa21.35■■□□□ 1.01
RTN4-207ENST00000402434 DENND3A2RUS2 1198 aa21.34■■□□□ 1.01
RTN4-207ENST00000402434 ARHGEF35A5YM69 484 aa21.34■■□□□ 1.01
RTN4-207ENST00000402434 C9IYK1 514 aa21.34■■□□□ 1.01
RTN4-207ENST00000402434 SLC26A4O43511 780 aa21.34■■□□□ 1.01
RTN4-207ENST00000402434 ARHGEF15O94989 841 aa21.34■■□□□ 1.01
RTN4-207ENST00000402434 SRGAP2CP0DJJ0 459 aa21.34■■□□□ 1.01
RTN4-207ENST00000402434 CYP11B2P19099 503 aa21.34■■□□□ 1.01
RTN4-207ENST00000402434 GRIN1Q05586 938 aa21.34■■□□□ 1.01
RTN4-207ENST00000402434 SLC24A5Q71RS6 500 aa21.34■■□□□ 1.01
RTN4-207ENST00000402434 SRGAP1Q7Z6B7 1085 aa21.34■■□□□ 1.01
RTN4-207ENST00000402434 SP7Q8TDD2 431 aaPredicted RBP21.34■■□□□ 1.01
RTN4-207ENST00000402434 USP28Q96RU2 1077 aa21.34■■□□□ 1.01
RTN4-207ENST00000402434 CDH23Q9H251 3354 aa21.34■■□□□ 1.01
RTN4-207ENST00000402434 E9PMD0 336 aa21.33■■□□□ 1.01
RTN4-207ENST00000402434 EYA4O95677 639 aa21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms