RNA–Protein interactions for RNA: ENST00000399644.5

CACNA1C-218, Transcript of calcium voltage-gated channel subunit alpha1 C, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,511 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1C-218	ENST00000399644	CLU	P10909	449 aa		11.87	□□□□□ -0.51
CACNA1C-218	ENST00000399644	ITGA3	P26006	1051 aa		11.87	□□□□□ -0.51
CACNA1C-218	ENST00000399644	FLT3	P36888	993 aa		11.87	□□□□□ -0.51
CACNA1C-218	ENST00000399644	SCARA3	Q6AZY7	606 aa		11.87	□□□□□ -0.51
CACNA1C-218	ENST00000399644	LRRC8E	Q6NSJ5	796 aa		11.87	□□□□□ -0.51
CACNA1C-218	ENST00000399644	SMARCAD1	Q9H4L7	1026 aa		11.87	□□□□□ -0.51
CACNA1C-218	ENST00000399644	GINM1	Q9NU53	330 aa		11.87	□□□□□ -0.51
CACNA1C-218	ENST00000399644	INTS9	Q9NV88	658 aa	Known RBP	11.87	□□□□□ -0.51
CACNA1C-218	ENST00000399644	MRPL39	Q9NYK5	338 aa	Known RBP	11.87	□□□□□ -0.51
CACNA1C-218	ENST00000399644	IQCM	A0A1B0GVH7	501 aa		11.87	□□□□□ -0.51
CACNA1C-218	ENST00000399644	TTI1	O43156	1089 aa		11.87	□□□□□ -0.51
CACNA1C-218	ENST00000399644	SUN1	O94901	812 aa		11.87	□□□□□ -0.51
CACNA1C-218	ENST00000399644	AFP	P02771	609 aa	Known RBP	11.87	□□□□□ -0.51
CACNA1C-218	ENST00000399644	FYN	P06241	537 aa		11.87	□□□□□ -0.51
CACNA1C-218	ENST00000399644	FANCC	Q00597	558 aa		11.87	□□□□□ -0.51
CACNA1C-218	ENST00000399644	DMPK	Q09013	629 aa		11.87	□□□□□ -0.51
CACNA1C-218	ENST00000399644	PTGDR	Q13258	359 aa		11.87	□□□□□ -0.51
CACNA1C-218	ENST00000399644	CCDC197	Q8NCU1	140 aa		11.87	□□□□□ -0.51
CACNA1C-218	ENST00000399644	MTERF3	Q96E29	417 aa		11.87	□□□□□ -0.51
CACNA1C-218	ENST00000399644	GPR101	Q96P66	508 aa	Predicted RBP	11.87	□□□□□ -0.51
CACNA1C-218	ENST00000399644	GINS4	Q9BRT9	223 aa		11.87	□□□□□ -0.51
CACNA1C-218	ENST00000399644	REXO4	Q9GZR2	422 aa	Known RBP	11.87	□□□□□ -0.51
CACNA1C-218	ENST00000399644	TMEM245	Q9H330	911 aa		11.87	□□□□□ -0.51
CACNA1C-218	ENST00000399644	NDFIP2	Q9NV92	336 aa		11.87	□□□□□ -0.51
CACNA1C-218	ENST00000399644	PALLD	Q8WX93	1383 aa		11.87	□□□□□ -0.51
CACNA1C-218	ENST00000399644	C6orf222	P0C671	652 aa	Predicted RBP	11.87	□□□□□ -0.51
CACNA1C-218	ENST00000399644	DPYD	Q12882	1025 aa		11.87	□□□□□ -0.51
CACNA1C-218	ENST00000399644	GRAP	Q13588	217 aa		11.87	□□□□□ -0.51
CACNA1C-218	ENST00000399644	GRAPL	Q8TC17	118 aa	Predicted RBP	11.87	□□□□□ -0.51
CACNA1C-218	ENST00000399644	DCDC2C	A8MYV0	355 aa		11.87	□□□□□ -0.51
CACNA1C-218	ENST00000399644	MTRF1	O75570	445 aa	Known RBP	11.87	□□□□□ -0.51
CACNA1C-218	ENST00000399644	CPA1	P15085	419 aa		11.87	□□□□□ -0.51
CACNA1C-218	ENST00000399644	RAB14	P61106	215 aa		11.87	□□□□□ -0.51
CACNA1C-218	ENST00000399644	POSTN	Q15063	836 aa		11.87	□□□□□ -0.51
CACNA1C-218	ENST00000399644	MAPRE1	Q15691	268 aa	Known RBP	11.87	□□□□□ -0.51
CACNA1C-218	ENST00000399644	PTPN21	Q16825	1174 aa		11.87	□□□□□ -0.51
CACNA1C-218	ENST00000399644	KDELC2	Q7Z4H8	507 aa		11.87	□□□□□ -0.51
CACNA1C-218	ENST00000399644	MRPL50	Q8N5N7	158 aa	Known RBP	11.87	□□□□□ -0.51
CACNA1C-218	ENST00000399644	ENTPD7	Q9NQZ7	604 aa		11.87	□□□□□ -0.51
CACNA1C-218	ENST00000399644	GPATCH8	Q9UKJ3	1502 aa	Known RBP	11.87	□□□□□ -0.51
CACNA1C-218	ENST00000399644		A0A0G2JND7	137 aa		11.86	□□□□□ -0.51
CACNA1C-218	ENST00000399644	SFI1	A8K8P3	1242 aa		11.86	□□□□□ -0.51
CACNA1C-218	ENST00000399644	TRIM16	O95361	564 aa		11.86	□□□□□ -0.51
CACNA1C-218	ENST00000399644	KRT1	P04264	644 aa		11.86	□□□□□ -0.51
CACNA1C-218	ENST00000399644	CYP19A1	P11511	503 aa	Predicted RBP	11.86	□□□□□ -0.51
CACNA1C-218	ENST00000399644	SYTL3	Q4VX76	610 aa		11.86	□□□□□ -0.51
CACNA1C-218	ENST00000399644	EIF3C	Q99613	913 aa	Known RBP	11.86	□□□□□ -0.51
CACNA1C-218	ENST00000399644	ZC3H7B	Q9UGR2	993 aa	Known RBP	11.86	□□□□□ -0.51
CACNA1C-218	ENST00000399644	ADAM21	Q9UKJ8	722 aa		11.86	□□□□□ -0.51
CACNA1C-218	ENST00000399644	AURKC	Q9UQB9	309 aa		11.86	□□□□□ -0.51
CACNA1C-218	ENST00000399644	JCAD	Q9P266	1359 aa		11.86	□□□□□ -0.51
CACNA1C-218	ENST00000399644	STXBP3	O00186	592 aa		11.86	□□□□□ -0.51
CACNA1C-218	ENST00000399644	MCF2L	O15068	1137 aa		11.86	□□□□□ -0.51
CACNA1C-218	ENST00000399644	HSPA8	P11142	646 aa	Known RBP	11.86	□□□□□ -0.51
CACNA1C-218	ENST00000399644	EPB42	P16452	691 aa		11.86	□□□□□ -0.51
CACNA1C-218	ENST00000399644	IL6ST	P40189	918 aa	Predicted RBP	11.86	□□□□□ -0.51
CACNA1C-218	ENST00000399644	C2orf54	Q08AI8	447 aa		11.86	□□□□□ -0.51
CACNA1C-218	ENST00000399644	IRAK1BP1	Q5VVH5	260 aa		11.86	□□□□□ -0.51
CACNA1C-218	ENST00000399644	ITPRIPL1	Q6GPH6	555 aa		11.86	□□□□□ -0.51
CACNA1C-218	ENST00000399644	BSDC1	Q9NW68	430 aa	Predicted RBP	11.86	□□□□□ -0.51
CACNA1C-218	ENST00000399644	PALD1	Q9ULE6	856 aa		11.86	□□□□□ -0.51
CACNA1C-218	ENST00000399644	MAFF	Q9ULX9	164 aa		11.86	□□□□□ -0.51
CACNA1C-218	ENST00000399644	PIK3C2G	O75747	1445 aa		11.86	□□□□□ -0.51
CACNA1C-218	ENST00000399644	RNF103-CHMP3	A0A140T963	221 aa		11.86	□□□□□ -0.51
CACNA1C-218	ENST00000399644	TMCC1	O94876	653 aa		11.86	□□□□□ -0.51
CACNA1C-218	ENST00000399644	SEC31A	O94979	1220 aa	Known RBP	11.86	□□□□□ -0.51
CACNA1C-218	ENST00000399644	ESRRA	P11474	423 aa	Predicted RBP	11.86	□□□□□ -0.51
CACNA1C-218	ENST00000399644	NRG3	P56975	720 aa		11.86	□□□□□ -0.51
CACNA1C-218	ENST00000399644	ZNF568	Q3ZCX4	644 aa		11.86	□□□□□ -0.51
CACNA1C-218	ENST00000399644	KLC3	Q6P597	504 aa		11.86	□□□□□ -0.51
CACNA1C-218	ENST00000399644	MMS22L	Q6ZRQ5	1243 aa		11.86	□□□□□ -0.51
CACNA1C-218	ENST00000399644	DDIAS	Q8IXT1	998 aa		11.86	□□□□□ -0.51
CACNA1C-218	ENST00000399644	GIMAP8	Q8ND71	665 aa	Predicted RBP	11.86	□□□□□ -0.51
CACNA1C-218	ENST00000399644	PNMA1	Q8ND90	353 aa		11.86	□□□□□ -0.51
CACNA1C-218	ENST00000399644	OMA1	Q96E52	524 aa		11.86	□□□□□ -0.51
CACNA1C-218	ENST00000399644	NARS2	Q96I59	477 aa	Known RBP	11.86	□□□□□ -0.51
CACNA1C-218	ENST00000399644	SEL1L	Q9UBV2	794 aa		11.86	□□□□□ -0.51
CACNA1C-218	ENST00000399644	NUP160	Q12769	1436 aa		11.86	□□□□□ -0.51
CACNA1C-218	ENST00000399644	SCGN	O76038	276 aa		11.86	□□□□□ -0.51
CACNA1C-218	ENST00000399644	DDX5	P17844	614 aa	Known RBP	11.86	□□□□□ -0.51
CACNA1C-218	ENST00000399644	EIF2AK2	P19525	551 aa	Known RBP	11.86	□□□□□ -0.51
CACNA1C-218	ENST00000399644	TEC	P42680	631 aa		11.86	□□□□□ -0.51
CACNA1C-218	ENST00000399644	AARS	P49588	968 aa	Known RBP eCLIP	11.86	□□□□□ -0.51
CACNA1C-218	ENST00000399644	CSNK2B	P67870	215 aa		11.86	□□□□□ -0.51
CACNA1C-218	ENST00000399644	ALDH6A1	Q02252	535 aa	Known RBP	11.86	□□□□□ -0.51
CACNA1C-218	ENST00000399644	CYP4A11	Q02928	519 aa		11.86	□□□□□ -0.51
CACNA1C-218	ENST00000399644	PNOC	Q13519	176 aa		11.86	□□□□□ -0.51
CACNA1C-218	ENST00000399644	TTC23L	Q6PF05	361 aa		11.86	□□□□□ -0.51
CACNA1C-218	ENST00000399644	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	11.86	□□□□□ -0.51
CACNA1C-218	ENST00000399644	ESYT1	Q9BSJ8	1104 aa		11.86	□□□□□ -0.51
CACNA1C-218	ENST00000399644	CYP4F11	Q9HBI6	524 aa		11.86	□□□□□ -0.51
CACNA1C-218	ENST00000399644	SUN2	Q9UH99	717 aa		11.86	□□□□□ -0.51
CACNA1C-218	ENST00000399644	PRRG1	O14668	218 aa		11.86	□□□□□ -0.51
CACNA1C-218	ENST00000399644	POU5F1B	Q06416	359 aa		11.86	□□□□□ -0.51
CACNA1C-218	ENST00000399644	FBXW10	Q5XX13	1052 aa		11.86	□□□□□ -0.51
CACNA1C-218	ENST00000399644	RNF180	Q86T96	592 aa		11.86	□□□□□ -0.51
CACNA1C-218	ENST00000399644	MICALL2	Q8IY33	904 aa		11.86	□□□□□ -0.51
CACNA1C-218	ENST00000399644	NUP93	Q8N1F7	819 aa		11.86	□□□□□ -0.51
CACNA1C-218	ENST00000399644	IFT43	Q96FT9	208 aa		11.86	□□□□□ -0.51
CACNA1C-218	ENST00000399644	LRRC37B	Q96QE4	947 aa		11.86	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms