RNA–Protein interactions for RNA: ENST00000399641.5

CACNA1C-217, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,511 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-217ENST00000399641 DUX4Q9UBX2 424 aa11.88□□□□□ -0.51
CACNA1C-217ENST00000399641 TSPOAP1O95153 1857 aa11.88□□□□□ -0.51
CACNA1C-217ENST00000399641 TMEM191CA6NGB0 347 aa11.87□□□□□ -0.51
CACNA1C-217ENST00000399641 SPAG7O75391 227 aa11.87□□□□□ -0.51
CACNA1C-217ENST00000399641 ASNSP08243 561 aa11.87□□□□□ -0.51
CACNA1C-217ENST00000399641 PPARGP37231 505 aaPredicted RBP11.87□□□□□ -0.51
CACNA1C-217ENST00000399641 MYL5Q02045 173 aa11.87□□□□□ -0.51
CACNA1C-217ENST00000399641 FAM160B2Q86V87 743 aa11.87□□□□□ -0.51
CACNA1C-217ENST00000399641 OR6J1Q8NGC5 347 aa11.87□□□□□ -0.51
CACNA1C-217ENST00000399641 EGFL8Q99944 293 aa11.87□□□□□ -0.51
CACNA1C-217ENST00000399641 KLRF2D3W0D1 207 aa11.87□□□□□ -0.51
CACNA1C-217ENST00000399641 CLUP10909 449 aa11.87□□□□□ -0.51
CACNA1C-217ENST00000399641 ITGA3P26006 1051 aa11.87□□□□□ -0.51
CACNA1C-217ENST00000399641 FLT3P36888 993 aa11.87□□□□□ -0.51
CACNA1C-217ENST00000399641 SCARA3Q6AZY7 606 aa11.87□□□□□ -0.51
CACNA1C-217ENST00000399641 LRRC8EQ6NSJ5 796 aa11.87□□□□□ -0.51
CACNA1C-217ENST00000399641 SMARCAD1Q9H4L7 1026 aa11.87□□□□□ -0.51
CACNA1C-217ENST00000399641 GINM1Q9NU53 330 aa11.87□□□□□ -0.51
CACNA1C-217ENST00000399641 INTS9Q9NV88 658 aaKnown RBP11.87□□□□□ -0.51
CACNA1C-217ENST00000399641 MRPL39Q9NYK5 338 aaKnown RBP11.87□□□□□ -0.51
CACNA1C-217ENST00000399641 IQCMA0A1B0GVH7 501 aa11.87□□□□□ -0.51
CACNA1C-217ENST00000399641 TTI1O43156 1089 aa11.87□□□□□ -0.51
CACNA1C-217ENST00000399641 SUN1O94901 812 aa11.87□□□□□ -0.51
CACNA1C-217ENST00000399641 AFPP02771 609 aaKnown RBP11.87□□□□□ -0.51
CACNA1C-217ENST00000399641 FYNP06241 537 aa11.87□□□□□ -0.51
CACNA1C-217ENST00000399641 FANCCQ00597 558 aa11.87□□□□□ -0.51
CACNA1C-217ENST00000399641 DMPKQ09013 629 aa11.87□□□□□ -0.51
CACNA1C-217ENST00000399641 PTGDRQ13258 359 aa11.87□□□□□ -0.51
CACNA1C-217ENST00000399641 CCDC197Q8NCU1 140 aa11.87□□□□□ -0.51
CACNA1C-217ENST00000399641 MTERF3Q96E29 417 aa11.87□□□□□ -0.51
CACNA1C-217ENST00000399641 GPR101Q96P66 508 aaPredicted RBP11.87□□□□□ -0.51
CACNA1C-217ENST00000399641 GINS4Q9BRT9 223 aa11.87□□□□□ -0.51
CACNA1C-217ENST00000399641 REXO4Q9GZR2 422 aaKnown RBP11.87□□□□□ -0.51
CACNA1C-217ENST00000399641 TMEM245Q9H330 911 aa11.87□□□□□ -0.51
CACNA1C-217ENST00000399641 NDFIP2Q9NV92 336 aa11.87□□□□□ -0.51
CACNA1C-217ENST00000399641 PALLDQ8WX93 1383 aa11.87□□□□□ -0.51
CACNA1C-217ENST00000399641 C6orf222P0C671 652 aaPredicted RBP11.87□□□□□ -0.51
CACNA1C-217ENST00000399641 DPYDQ12882 1025 aa11.87□□□□□ -0.51
CACNA1C-217ENST00000399641 GRAPQ13588 217 aa11.87□□□□□ -0.51
CACNA1C-217ENST00000399641 GRAPLQ8TC17 118 aaPredicted RBP11.87□□□□□ -0.51
CACNA1C-217ENST00000399641 DCDC2CA8MYV0 355 aa11.87□□□□□ -0.51
CACNA1C-217ENST00000399641 MTRF1O75570 445 aaKnown RBP11.87□□□□□ -0.51
CACNA1C-217ENST00000399641 CPA1P15085 419 aa11.87□□□□□ -0.51
CACNA1C-217ENST00000399641 RAB14P61106 215 aa11.87□□□□□ -0.51
CACNA1C-217ENST00000399641 POSTNQ15063 836 aa11.87□□□□□ -0.51
CACNA1C-217ENST00000399641 MAPRE1Q15691 268 aaKnown RBP11.87□□□□□ -0.51
CACNA1C-217ENST00000399641 PTPN21Q16825 1174 aa11.87□□□□□ -0.51
CACNA1C-217ENST00000399641 KDELC2Q7Z4H8 507 aa11.87□□□□□ -0.51
CACNA1C-217ENST00000399641 MRPL50Q8N5N7 158 aaKnown RBP11.87□□□□□ -0.51
CACNA1C-217ENST00000399641 ENTPD7Q9NQZ7 604 aa11.87□□□□□ -0.51
CACNA1C-217ENST00000399641 GPATCH8Q9UKJ3 1502 aaKnown RBP11.87□□□□□ -0.51
CACNA1C-217ENST00000399641 A0A0G2JND7 137 aa11.86□□□□□ -0.51
CACNA1C-217ENST00000399641 SFI1A8K8P3 1242 aa11.86□□□□□ -0.51
CACNA1C-217ENST00000399641 TRIM16O95361 564 aa11.86□□□□□ -0.51
CACNA1C-217ENST00000399641 KRT1P04264 644 aa11.86□□□□□ -0.51
CACNA1C-217ENST00000399641 CYP19A1P11511 503 aaPredicted RBP11.86□□□□□ -0.51
CACNA1C-217ENST00000399641 SYTL3Q4VX76 610 aa11.86□□□□□ -0.51
CACNA1C-217ENST00000399641 EIF3CQ99613 913 aaKnown RBP11.86□□□□□ -0.51
CACNA1C-217ENST00000399641 ZC3H7BQ9UGR2 993 aaKnown RBP11.86□□□□□ -0.51
CACNA1C-217ENST00000399641 ADAM21Q9UKJ8 722 aa11.86□□□□□ -0.51
CACNA1C-217ENST00000399641 AURKCQ9UQB9 309 aa11.86□□□□□ -0.51
CACNA1C-217ENST00000399641 JCADQ9P266 1359 aa11.86□□□□□ -0.51
CACNA1C-217ENST00000399641 STXBP3O00186 592 aa11.86□□□□□ -0.51
CACNA1C-217ENST00000399641 MCF2LO15068 1137 aa11.86□□□□□ -0.51
CACNA1C-217ENST00000399641 HSPA8P11142 646 aaKnown RBP11.86□□□□□ -0.51
CACNA1C-217ENST00000399641 EPB42P16452 691 aa11.86□□□□□ -0.51
CACNA1C-217ENST00000399641 IL6STP40189 918 aaPredicted RBP11.86□□□□□ -0.51
CACNA1C-217ENST00000399641 C2orf54Q08AI8 447 aa11.86□□□□□ -0.51
CACNA1C-217ENST00000399641 IRAK1BP1Q5VVH5 260 aa11.86□□□□□ -0.51
CACNA1C-217ENST00000399641 ITPRIPL1Q6GPH6 555 aa11.86□□□□□ -0.51
CACNA1C-217ENST00000399641 BSDC1Q9NW68 430 aaPredicted RBP11.86□□□□□ -0.51
CACNA1C-217ENST00000399641 PALD1Q9ULE6 856 aa11.86□□□□□ -0.51
CACNA1C-217ENST00000399641 MAFFQ9ULX9 164 aa11.86□□□□□ -0.51
CACNA1C-217ENST00000399641 PIK3C2GO75747 1445 aa11.86□□□□□ -0.51
CACNA1C-217ENST00000399641 RNF103-CHMP3A0A140T963 221 aa11.86□□□□□ -0.51
CACNA1C-217ENST00000399641 TMCC1O94876 653 aa11.86□□□□□ -0.51
CACNA1C-217ENST00000399641 SEC31AO94979 1220 aaKnown RBP11.86□□□□□ -0.51
CACNA1C-217ENST00000399641 ESRRAP11474 423 aaPredicted RBP11.86□□□□□ -0.51
CACNA1C-217ENST00000399641 NRG3P56975 720 aa11.86□□□□□ -0.51
CACNA1C-217ENST00000399641 ZNF568Q3ZCX4 644 aa11.86□□□□□ -0.51
CACNA1C-217ENST00000399641 KLC3Q6P597 504 aa11.86□□□□□ -0.51
CACNA1C-217ENST00000399641 MMS22LQ6ZRQ5 1243 aa11.86□□□□□ -0.51
CACNA1C-217ENST00000399641 DDIASQ8IXT1 998 aa11.86□□□□□ -0.51
CACNA1C-217ENST00000399641 GIMAP8Q8ND71 665 aaPredicted RBP11.86□□□□□ -0.51
CACNA1C-217ENST00000399641 PNMA1Q8ND90 353 aa11.86□□□□□ -0.51
CACNA1C-217ENST00000399641 OMA1Q96E52 524 aa11.86□□□□□ -0.51
CACNA1C-217ENST00000399641 NARS2Q96I59 477 aaKnown RBP11.86□□□□□ -0.51
CACNA1C-217ENST00000399641 SEL1LQ9UBV2 794 aa11.86□□□□□ -0.51
CACNA1C-217ENST00000399641 NUP160Q12769 1436 aa11.86□□□□□ -0.51
CACNA1C-217ENST00000399641 SCGNO76038 276 aa11.86□□□□□ -0.51
CACNA1C-217ENST00000399641 DDX5P17844 614 aaKnown RBP11.86□□□□□ -0.51
CACNA1C-217ENST00000399641 EIF2AK2P19525 551 aaKnown RBP11.86□□□□□ -0.51
CACNA1C-217ENST00000399641 TECP42680 631 aa11.86□□□□□ -0.51
CACNA1C-217ENST00000399641 AARSP49588 968 aaKnown RBP eCLIP11.86□□□□□ -0.51
CACNA1C-217ENST00000399641 CSNK2BP67870 215 aa11.86□□□□□ -0.51
CACNA1C-217ENST00000399641 ALDH6A1Q02252 535 aaKnown RBP11.86□□□□□ -0.51
CACNA1C-217ENST00000399641 CYP4A11Q02928 519 aa11.86□□□□□ -0.51
CACNA1C-217ENST00000399641 PNOCQ13519 176 aa11.86□□□□□ -0.51
CACNA1C-217ENST00000399641 TTC23LQ6PF05 361 aa11.86□□□□□ -0.51
CACNA1C-217ENST00000399641 ZSCAN10Q96SZ4 725 aaPredicted RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms