RNA–Protein interactions for RNA: ENST00000399638.5

CACNA1C-216, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,595 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-216ENST00000399638 ATP1A1P05023 1023 aaKnown RBP11.72□□□□□ -0.53
CACNA1C-216ENST00000399638 GAP43P17677 238 aa11.72□□□□□ -0.53
CACNA1C-216ENST00000399638 EZH2Q15910 746 aaKnown RBP11.72□□□□□ -0.53
CACNA1C-216ENST00000399638 B4GALNT4Q76KP1 1039 aa11.72□□□□□ -0.53
CACNA1C-216ENST00000399638 CFAP61Q8NHU2 1237 aa11.72□□□□□ -0.53
CACNA1C-216ENST00000399638 OSBPL10Q9BXB5 764 aa11.72□□□□□ -0.53
CACNA1C-216ENST00000399638 SIK2Q9H0K1 926 aa11.72□□□□□ -0.53
CACNA1C-216ENST00000399638 TMEM206Q9H813 350 aa11.72□□□□□ -0.53
CACNA1C-216ENST00000399638 KCNQ3O43525 872 aa11.72□□□□□ -0.53
CACNA1C-216ENST00000399638 RPS6KA5O75582 802 aa11.72□□□□□ -0.53
CACNA1C-216ENST00000399638 GFAPP14136 432 aa11.72□□□□□ -0.53
CACNA1C-216ENST00000399638 AKT1P31749 480 aa11.72□□□□□ -0.53
CACNA1C-216ENST00000399638 CYP4A22Q5TCH4 519 aa11.72□□□□□ -0.53
CACNA1C-216ENST00000399638 IER5Q5VY09 327 aa11.72□□□□□ -0.53
CACNA1C-216ENST00000399638 SARM1Q6SZW1 724 aa11.72□□□□□ -0.53
CACNA1C-216ENST00000399638 PPP1R14AQ96A00 147 aa11.72□□□□□ -0.53
CACNA1C-216ENST00000399638 RMDN1Q96DB5 314 aa11.72□□□□□ -0.53
CACNA1C-216ENST00000399638 FRMD6Q96NE9 622 aa11.72□□□□□ -0.53
CACNA1C-216ENST00000399638 DACH2Q96NX9 599 aa11.72□□□□□ -0.53
CACNA1C-216ENST00000399638 TSSK1BQ9BXA7 367 aa11.72□□□□□ -0.53
CACNA1C-216ENST00000399638 CROCC2H7BZ55 1655 aa11.72□□□□□ -0.53
CACNA1C-216ENST00000399638 RPS6KA4O75676 772 aa11.71□□□□□ -0.53
CACNA1C-216ENST00000399638 STAG3L1P0CL83 205 aa11.71□□□□□ -0.53
CACNA1C-216ENST00000399638 TRIM32Q13049 653 aa11.71□□□□□ -0.53
CACNA1C-216ENST00000399638 ZNF394Q53GI3 561 aa11.71□□□□□ -0.53
CACNA1C-216ENST00000399638 CHMP1BQ7LBR1 199 aa11.71□□□□□ -0.53
CACNA1C-216ENST00000399638 RAB17Q9H0T7 212 aa11.71□□□□□ -0.53
CACNA1C-216ENST00000399638 FAN1Q9Y2M0 1017 aa11.71□□□□□ -0.53
CACNA1C-216ENST00000399638 PNMA6EA0A0J9YXQ4 647 aa11.71□□□□□ -0.53
CACNA1C-216ENST00000399638 F5H423 210 aaPredicted RBP11.71□□□□□ -0.53
CACNA1C-216ENST00000399638 LRRN2O75325 713 aa11.71□□□□□ -0.53
CACNA1C-216ENST00000399638 MAP4P27816 1152 aaKnown RBP11.71□□□□□ -0.53
CACNA1C-216ENST00000399638 TMEM132BQ14DG7 1078 aa11.71□□□□□ -0.53
CACNA1C-216ENST00000399638 TRIM60Q495X7 471 aa11.71□□□□□ -0.53
CACNA1C-216ENST00000399638 NSUN6Q8TEA1 469 aaKnown RBP11.71□□□□□ -0.53
CACNA1C-216ENST00000399638 ACAD9Q9H845 621 aa11.71□□□□□ -0.53
CACNA1C-216ENST00000399638 MLH3Q9UHC1 1453 aa11.71□□□□□ -0.53
CACNA1C-216ENST00000399638 PHLPP2Q6ZVD8 1323 aa11.71□□□□□ -0.53
CACNA1C-216ENST00000399638 MYO1FO00160 1098 aa11.71□□□□□ -0.53
CACNA1C-216ENST00000399638 ZNF263O14978 683 aa11.71□□□□□ -0.53
CACNA1C-216ENST00000399638 CLDN3O15551 220 aa11.71□□□□□ -0.53
CACNA1C-216ENST00000399638 SYNCRIPO60506 623 aaKnown RBP11.71□□□□□ -0.53
CACNA1C-216ENST00000399638 IL13P35225 146 aa11.71□□□□□ -0.53
CACNA1C-216ENST00000399638 ETF1P62495 437 aaKnown RBP11.71□□□□□ -0.53
CACNA1C-216ENST00000399638 ARHGEF7Q14155 803 aa11.71□□□□□ -0.53
CACNA1C-216ENST00000399638 GLE1Q53GS7 698 aaKnown RBP11.71□□□□□ -0.53
CACNA1C-216ENST00000399638 GALNT17Q6IS24 598 aa11.71□□□□□ -0.53
CACNA1C-216ENST00000399638 RCSD1Q6JBY9 416 aa11.71□□□□□ -0.53
CACNA1C-216ENST00000399638 CSGALNACT1Q8TDX6 532 aa11.71□□□□□ -0.53
CACNA1C-216ENST00000399638 EXO5Q9H790 373 aa11.71□□□□□ -0.53
CACNA1C-216ENST00000399638 EVA1BQ9NVM1 165 aa11.71□□□□□ -0.53
CACNA1C-216ENST00000399638 CPSF1Q10570 1443 aaKnown RBP11.71□□□□□ -0.53
CACNA1C-216ENST00000399638 FAM47E-STBD1D6RA91 191 aa11.71□□□□□ -0.54
CACNA1C-216ENST00000399638 NDUFAB1O14561 156 aa11.71□□□□□ -0.54
CACNA1C-216ENST00000399638 KCNK3O14649 394 aa11.71□□□□□ -0.54
CACNA1C-216ENST00000399638 BUB1O43683 1085 aa11.71□□□□□ -0.54
CACNA1C-216ENST00000399638 LMNAP02545 664 aaKnown RBP11.71□□□□□ -0.54
CACNA1C-216ENST00000399638 JAK3P52333 1124 aa11.71□□□□□ -0.54
CACNA1C-216ENST00000399638 BASP1P80723 227 aaKnown RBP11.71□□□□□ -0.54
CACNA1C-216ENST00000399638 RBBP7Q16576 425 aa11.71□□□□□ -0.54
CACNA1C-216ENST00000399638 ZSCAN26Q16670 478 aa11.71□□□□□ -0.54
CACNA1C-216ENST00000399638 GNASQ5JWF2 1037 aa11.71□□□□□ -0.54
CACNA1C-216ENST00000399638 C11orf96Q7Z7L8 435 aa11.71□□□□□ -0.54
CACNA1C-216ENST00000399638 ARRDC4Q8NCT1 418 aa11.71□□□□□ -0.54
CACNA1C-216ENST00000399638 C1orf131Q8NDD1 294 aaKnown RBP11.71□□□□□ -0.54
CACNA1C-216ENST00000399638 ZFP42Q96MM3 310 aa11.71□□□□□ -0.54
CACNA1C-216ENST00000399638 PNMA5Q96PV4 448 aa11.71□□□□□ -0.54
CACNA1C-216ENST00000399638 NGRNQ9NPE2 291 aaKnown RBP11.71□□□□□ -0.54
CACNA1C-216ENST00000399638 MED4Q9NPJ6 270 aa11.71□□□□□ -0.54
CACNA1C-216ENST00000399638 DFFAO00273 331 aa11.71□□□□□ -0.54
CACNA1C-216ENST00000399638 EPB42P16452 691 aa11.71□□□□□ -0.54
CACNA1C-216ENST00000399638 PAPOLAP51003 745 aaKnown RBP11.71□□□□□ -0.54
CACNA1C-216ENST00000399638 AKIRIN2Q53H80 203 aa11.71□□□□□ -0.54
CACNA1C-216ENST00000399638 SLFN12LQ6IEE8 588 aa11.71□□□□□ -0.54
CACNA1C-216ENST00000399638 NBPF10Q6P3W6 841 aaKnown RBP11.71□□□□□ -0.54
CACNA1C-216ENST00000399638 PLEKHF1Q96S99 279 aa11.71□□□□□ -0.54
CACNA1C-216ENST00000399638 ZBTB18Q99592 522 aa11.71□□□□□ -0.54
CACNA1C-216ENST00000399638 TRIM62Q9BVG3 475 aa11.71□□□□□ -0.54
CACNA1C-216ENST00000399638 FBXL5Q9UKA1 691 aa11.71□□□□□ -0.54
CACNA1C-216ENST00000399638 UBA6A0AVT1 1052 aaPredicted RBP11.7□□□□□ -0.54
CACNA1C-216ENST00000399638 TEX9Q8N6V9 391 aa11.7□□□□□ -0.54
CACNA1C-216ENST00000399638 NCLNQ969V3 563 aa11.7□□□□□ -0.54
CACNA1C-216ENST00000399638 CARD6Q9BX69 1037 aa11.7□□□□□ -0.54
CACNA1C-216ENST00000399638 CACNA2D2Q9NY47 1150 aa11.7□□□□□ -0.54
CACNA1C-216ENST00000399638 PPARGC1AQ9UBK2 798 aaKnown RBP11.7□□□□□ -0.54
CACNA1C-216ENST00000399638 FAM50BQ9Y247 325 aa11.7□□□□□ -0.54
CACNA1C-216ENST00000399638 POC1B-GALNT4F8VUJ3 575 aa11.7□□□□□ -0.54
CACNA1C-216ENST00000399638 VCAM1P19320 739 aa11.7□□□□□ -0.54
CACNA1C-216ENST00000399638 SNX17Q15036 470 aa11.7□□□□□ -0.54
CACNA1C-216ENST00000399638 RASIP1Q5U651 963 aa11.7□□□□□ -0.54
CACNA1C-216ENST00000399638 LRRC8AQ8IWT6 810 aa11.7□□□□□ -0.54
CACNA1C-216ENST00000399638 ARMC2Q8NEN0 867 aa11.7□□□□□ -0.54
CACNA1C-216ENST00000399638 ANKRD7Q92527 254 aa11.7□□□□□ -0.54
CACNA1C-216ENST00000399638 KIF12Q96FN5 646 aa11.7□□□□□ -0.54
CACNA1C-216ENST00000399638 MYCBPQ99417 103 aaPredicted RBP11.7□□□□□ -0.54
CACNA1C-216ENST00000399638 SPDYE5A6NIY4 337 aa11.7□□□□□ -0.54
CACNA1C-216ENST00000399638 EFCAB14O75071 495 aa11.7□□□□□ -0.54
CACNA1C-216ENST00000399638 STX2P32856 288 aa11.7□□□□□ -0.54
CACNA1C-216ENST00000399638 STAT3P40763 770 aa11.7□□□□□ -0.54
CACNA1C-216ENST00000399638 EIF4A1P60842 406 aaKnown RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms