RNA–Protein interactions for RNA: ENST00000399601.5

CACNA1C-208, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,511 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-208ENST00000399601 CLUP10909 449 aa11.87□□□□□ -0.51
CACNA1C-208ENST00000399601 ITGA3P26006 1051 aa11.87□□□□□ -0.51
CACNA1C-208ENST00000399601 FLT3P36888 993 aa11.87□□□□□ -0.51
CACNA1C-208ENST00000399601 SCARA3Q6AZY7 606 aa11.87□□□□□ -0.51
CACNA1C-208ENST00000399601 LRRC8EQ6NSJ5 796 aa11.87□□□□□ -0.51
CACNA1C-208ENST00000399601 SMARCAD1Q9H4L7 1026 aa11.87□□□□□ -0.51
CACNA1C-208ENST00000399601 GINM1Q9NU53 330 aa11.87□□□□□ -0.51
CACNA1C-208ENST00000399601 INTS9Q9NV88 658 aaKnown RBP11.87□□□□□ -0.51
CACNA1C-208ENST00000399601 MRPL39Q9NYK5 338 aaKnown RBP11.87□□□□□ -0.51
CACNA1C-208ENST00000399601 IQCMA0A1B0GVH7 501 aa11.87□□□□□ -0.51
CACNA1C-208ENST00000399601 TTI1O43156 1089 aa11.87□□□□□ -0.51
CACNA1C-208ENST00000399601 SUN1O94901 812 aa11.87□□□□□ -0.51
CACNA1C-208ENST00000399601 AFPP02771 609 aaKnown RBP11.87□□□□□ -0.51
CACNA1C-208ENST00000399601 FYNP06241 537 aa11.87□□□□□ -0.51
CACNA1C-208ENST00000399601 FANCCQ00597 558 aa11.87□□□□□ -0.51
CACNA1C-208ENST00000399601 DMPKQ09013 629 aa11.87□□□□□ -0.51
CACNA1C-208ENST00000399601 PTGDRQ13258 359 aa11.87□□□□□ -0.51
CACNA1C-208ENST00000399601 CCDC197Q8NCU1 140 aa11.87□□□□□ -0.51
CACNA1C-208ENST00000399601 MTERF3Q96E29 417 aa11.87□□□□□ -0.51
CACNA1C-208ENST00000399601 GPR101Q96P66 508 aaPredicted RBP11.87□□□□□ -0.51
CACNA1C-208ENST00000399601 GINS4Q9BRT9 223 aa11.87□□□□□ -0.51
CACNA1C-208ENST00000399601 REXO4Q9GZR2 422 aaKnown RBP11.87□□□□□ -0.51
CACNA1C-208ENST00000399601 TMEM245Q9H330 911 aa11.87□□□□□ -0.51
CACNA1C-208ENST00000399601 NDFIP2Q9NV92 336 aa11.87□□□□□ -0.51
CACNA1C-208ENST00000399601 PALLDQ8WX93 1383 aa11.87□□□□□ -0.51
CACNA1C-208ENST00000399601 C6orf222P0C671 652 aaPredicted RBP11.87□□□□□ -0.51
CACNA1C-208ENST00000399601 DPYDQ12882 1025 aa11.87□□□□□ -0.51
CACNA1C-208ENST00000399601 GRAPQ13588 217 aa11.87□□□□□ -0.51
CACNA1C-208ENST00000399601 GRAPLQ8TC17 118 aaPredicted RBP11.87□□□□□ -0.51
CACNA1C-208ENST00000399601 DCDC2CA8MYV0 355 aa11.87□□□□□ -0.51
CACNA1C-208ENST00000399601 MTRF1O75570 445 aaKnown RBP11.87□□□□□ -0.51
CACNA1C-208ENST00000399601 CPA1P15085 419 aa11.87□□□□□ -0.51
CACNA1C-208ENST00000399601 RAB14P61106 215 aa11.87□□□□□ -0.51
CACNA1C-208ENST00000399601 POSTNQ15063 836 aa11.87□□□□□ -0.51
CACNA1C-208ENST00000399601 MAPRE1Q15691 268 aaKnown RBP11.87□□□□□ -0.51
CACNA1C-208ENST00000399601 PTPN21Q16825 1174 aa11.87□□□□□ -0.51
CACNA1C-208ENST00000399601 KDELC2Q7Z4H8 507 aa11.87□□□□□ -0.51
CACNA1C-208ENST00000399601 MRPL50Q8N5N7 158 aaKnown RBP11.87□□□□□ -0.51
CACNA1C-208ENST00000399601 ENTPD7Q9NQZ7 604 aa11.87□□□□□ -0.51
CACNA1C-208ENST00000399601 GPATCH8Q9UKJ3 1502 aaKnown RBP11.87□□□□□ -0.51
CACNA1C-208ENST00000399601 A0A0G2JND7 137 aa11.86□□□□□ -0.51
CACNA1C-208ENST00000399601 SFI1A8K8P3 1242 aa11.86□□□□□ -0.51
CACNA1C-208ENST00000399601 TRIM16O95361 564 aa11.86□□□□□ -0.51
CACNA1C-208ENST00000399601 KRT1P04264 644 aa11.86□□□□□ -0.51
CACNA1C-208ENST00000399601 CYP19A1P11511 503 aaPredicted RBP11.86□□□□□ -0.51
CACNA1C-208ENST00000399601 SYTL3Q4VX76 610 aa11.86□□□□□ -0.51
CACNA1C-208ENST00000399601 EIF3CQ99613 913 aaKnown RBP11.86□□□□□ -0.51
CACNA1C-208ENST00000399601 ZC3H7BQ9UGR2 993 aaKnown RBP11.86□□□□□ -0.51
CACNA1C-208ENST00000399601 ADAM21Q9UKJ8 722 aa11.86□□□□□ -0.51
CACNA1C-208ENST00000399601 AURKCQ9UQB9 309 aa11.86□□□□□ -0.51
CACNA1C-208ENST00000399601 JCADQ9P266 1359 aa11.86□□□□□ -0.51
CACNA1C-208ENST00000399601 STXBP3O00186 592 aa11.86□□□□□ -0.51
CACNA1C-208ENST00000399601 MCF2LO15068 1137 aa11.86□□□□□ -0.51
CACNA1C-208ENST00000399601 HSPA8P11142 646 aaKnown RBP11.86□□□□□ -0.51
CACNA1C-208ENST00000399601 EPB42P16452 691 aa11.86□□□□□ -0.51
CACNA1C-208ENST00000399601 IL6STP40189 918 aaPredicted RBP11.86□□□□□ -0.51
CACNA1C-208ENST00000399601 C2orf54Q08AI8 447 aa11.86□□□□□ -0.51
CACNA1C-208ENST00000399601 IRAK1BP1Q5VVH5 260 aa11.86□□□□□ -0.51
CACNA1C-208ENST00000399601 ITPRIPL1Q6GPH6 555 aa11.86□□□□□ -0.51
CACNA1C-208ENST00000399601 BSDC1Q9NW68 430 aaPredicted RBP11.86□□□□□ -0.51
CACNA1C-208ENST00000399601 PALD1Q9ULE6 856 aa11.86□□□□□ -0.51
CACNA1C-208ENST00000399601 MAFFQ9ULX9 164 aa11.86□□□□□ -0.51
CACNA1C-208ENST00000399601 PIK3C2GO75747 1445 aa11.86□□□□□ -0.51
CACNA1C-208ENST00000399601 RNF103-CHMP3A0A140T963 221 aa11.86□□□□□ -0.51
CACNA1C-208ENST00000399601 TMCC1O94876 653 aa11.86□□□□□ -0.51
CACNA1C-208ENST00000399601 SEC31AO94979 1220 aaKnown RBP11.86□□□□□ -0.51
CACNA1C-208ENST00000399601 ESRRAP11474 423 aaPredicted RBP11.86□□□□□ -0.51
CACNA1C-208ENST00000399601 NRG3P56975 720 aa11.86□□□□□ -0.51
CACNA1C-208ENST00000399601 ZNF568Q3ZCX4 644 aa11.86□□□□□ -0.51
CACNA1C-208ENST00000399601 KLC3Q6P597 504 aa11.86□□□□□ -0.51
CACNA1C-208ENST00000399601 MMS22LQ6ZRQ5 1243 aa11.86□□□□□ -0.51
CACNA1C-208ENST00000399601 DDIASQ8IXT1 998 aa11.86□□□□□ -0.51
CACNA1C-208ENST00000399601 GIMAP8Q8ND71 665 aaPredicted RBP11.86□□□□□ -0.51
CACNA1C-208ENST00000399601 PNMA1Q8ND90 353 aa11.86□□□□□ -0.51
CACNA1C-208ENST00000399601 OMA1Q96E52 524 aa11.86□□□□□ -0.51
CACNA1C-208ENST00000399601 NARS2Q96I59 477 aaKnown RBP11.86□□□□□ -0.51
CACNA1C-208ENST00000399601 SEL1LQ9UBV2 794 aa11.86□□□□□ -0.51
CACNA1C-208ENST00000399601 NUP160Q12769 1436 aa11.86□□□□□ -0.51
CACNA1C-208ENST00000399601 SCGNO76038 276 aa11.86□□□□□ -0.51
CACNA1C-208ENST00000399601 DDX5P17844 614 aaKnown RBP11.86□□□□□ -0.51
CACNA1C-208ENST00000399601 EIF2AK2P19525 551 aaKnown RBP11.86□□□□□ -0.51
CACNA1C-208ENST00000399601 TECP42680 631 aa11.86□□□□□ -0.51
CACNA1C-208ENST00000399601 AARSP49588 968 aaKnown RBP eCLIP11.86□□□□□ -0.51
CACNA1C-208ENST00000399601 CSNK2BP67870 215 aa11.86□□□□□ -0.51
CACNA1C-208ENST00000399601 ALDH6A1Q02252 535 aaKnown RBP11.86□□□□□ -0.51
CACNA1C-208ENST00000399601 CYP4A11Q02928 519 aa11.86□□□□□ -0.51
CACNA1C-208ENST00000399601 PNOCQ13519 176 aa11.86□□□□□ -0.51
CACNA1C-208ENST00000399601 TTC23LQ6PF05 361 aa11.86□□□□□ -0.51
CACNA1C-208ENST00000399601 ZSCAN10Q96SZ4 725 aaPredicted RBP11.86□□□□□ -0.51
CACNA1C-208ENST00000399601 ESYT1Q9BSJ8 1104 aa11.86□□□□□ -0.51
CACNA1C-208ENST00000399601 CYP4F11Q9HBI6 524 aa11.86□□□□□ -0.51
CACNA1C-208ENST00000399601 SUN2Q9UH99 717 aa11.86□□□□□ -0.51
CACNA1C-208ENST00000399601 PRRG1O14668 218 aa11.86□□□□□ -0.51
CACNA1C-208ENST00000399601 POU5F1BQ06416 359 aa11.86□□□□□ -0.51
CACNA1C-208ENST00000399601 FBXW10Q5XX13 1052 aa11.86□□□□□ -0.51
CACNA1C-208ENST00000399601 RNF180Q86T96 592 aa11.86□□□□□ -0.51
CACNA1C-208ENST00000399601 MICALL2Q8IY33 904 aa11.86□□□□□ -0.51
CACNA1C-208ENST00000399601 NUP93Q8N1F7 819 aa11.86□□□□□ -0.51
CACNA1C-208ENST00000399601 IFT43Q96FT9 208 aa11.86□□□□□ -0.51
CACNA1C-208ENST00000399601 LRRC37BQ96QE4 947 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms