RNA–Protein interactions for RNA: ENST00000399306.6

CTNS-203, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3 BASIC

Gene CTNS, Length 803 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-203ENST00000399306 TSHZ1Q6ZSZ6 1077 aa19.64■□□□□ 0.73
CTNS-203ENST00000399306 EPSTI1Q96J88 318 aa19.64■□□□□ 0.73
CTNS-203ENST00000399306 INO80BQ9C086 356 aaPredicted RBP19.64■□□□□ 0.73
CTNS-203ENST00000399306 MTIF3Q9H2K0 278 aaKnown RBP19.64■□□□□ 0.73
CTNS-203ENST00000399306 ADAMTS10Q9H324 1103 aa19.64■□□□□ 0.73
CTNS-203ENST00000399306 E9PMD0 336 aa19.63■□□□□ 0.73
CTNS-203ENST00000399306 FGBP02675 491 aa19.63■□□□□ 0.73
CTNS-203ENST00000399306 PLCG1P19174 1290 aa19.63■□□□□ 0.73
CTNS-203ENST00000399306 NCLP19338 710 aaKnown RBP19.63■□□□□ 0.73
CTNS-203ENST00000399306 GUCY2CP25092 1073 aa19.63■□□□□ 0.73
CTNS-203ENST00000399306 ARL2P36404 184 aa19.63■□□□□ 0.73
CTNS-203ENST00000399306 KARSQ15046 597 aaKnown RBP19.63■□□□□ 0.73
CTNS-203ENST00000399306 USP49Q70CQ1 688 aa19.63■□□□□ 0.73
CTNS-203ENST00000399306 C16orf59Q7L2K0 433 aa19.63■□□□□ 0.73
CTNS-203ENST00000399306 KCNK18Q7Z418 384 aa19.63■□□□□ 0.73
CTNS-203ENST00000399306 RASSF8Q8NHQ8 419 aa19.63■□□□□ 0.73
CTNS-203ENST00000399306 HERVK_113Q902F9 699 aa19.63■□□□□ 0.73
CTNS-203ENST00000399306 SEPT8Q92599 483 aa19.63■□□□□ 0.73
CTNS-203ENST00000399306 KIFAP3Q92845 792 aa19.63■□□□□ 0.73
CTNS-203ENST00000399306 NFKBIZQ9BYH8 718 aa19.63■□□□□ 0.73
CTNS-203ENST00000399306 CUEDC2Q9H467 287 aa19.63■□□□□ 0.73
CTNS-203ENST00000399306 C17orf75Q9HAS0 396 aa19.63■□□□□ 0.73
CTNS-203ENST00000399306 KCNG1Q9UIX4 513 aa19.63■□□□□ 0.73
CTNS-203ENST00000399306 COL4A3BPQ9Y5P4 624 aa19.63■□□□□ 0.73
CTNS-203ENST00000399306 ABHD14A-ACY1A0A1B0GW23 586 aa19.62■□□□□ 0.73
CTNS-203ENST00000399306 USO1O60763 962 aaKnown RBP19.62■□□□□ 0.73
CTNS-203ENST00000399306 VTNP04004 478 aa19.62■□□□□ 0.73
CTNS-203ENST00000399306 PLA2G4BP0C869 781 aa19.62■□□□□ 0.73
CTNS-203ENST00000399306 SLC12A3P55017 1021 aa19.62■□□□□ 0.73
CTNS-203ENST00000399306 NLRP11P59045 1033 aaKnown RBP19.62■□□□□ 0.73
CTNS-203ENST00000399306 DRP2Q13474 957 aa19.62■□□□□ 0.73
CTNS-203ENST00000399306 LPIN1Q14693 890 aa19.62■□□□□ 0.73
CTNS-203ENST00000399306 PCBP1Q15365 356 aaKnown RBP eCLIP19.62■□□□□ 0.73
CTNS-203ENST00000399306 RASIP1Q5U651 963 aa19.62■□□□□ 0.73
CTNS-203ENST00000399306 RESP18Q5W5W9 173 aa19.62■□□□□ 0.73
CTNS-203ENST00000399306 C1orf186Q6ZWK4 172 aa19.62■□□□□ 0.73
CTNS-203ENST00000399306 IFNLR1Q8IU57 520 aaPredicted RBP19.62■□□□□ 0.73
CTNS-203ENST00000399306 PRPF31Q8WWY3 499 aaKnown RBP19.62■□□□□ 0.73
CTNS-203ENST00000399306 RAD54LQ92698 747 aa19.62■□□□□ 0.73
CTNS-203ENST00000399306 BLOC1S4Q9NUP1 217 aa19.62■□□□□ 0.73
CTNS-203ENST00000399306 FAM13BQ9NYF5 915 aa19.62■□□□□ 0.73
CTNS-203ENST00000399306 EIF4BP23588 611 aaKnown RBP19.61■□□□□ 0.73
CTNS-203ENST00000399306 CMA1P23946 247 aa19.61■□□□□ 0.73
CTNS-203ENST00000399306 EPHB4P54760 987 aa19.61■□□□□ 0.73
CTNS-203ENST00000399306 LAMTOR4Q0VGL1 99 aa19.61■□□□□ 0.73
CTNS-203ENST00000399306 TFDP1Q14186 410 aa19.61■□□□□ 0.73
CTNS-203ENST00000399306 ZRSR1Q15695 479 aaKnown RBP19.61■□□□□ 0.73
CTNS-203ENST00000399306 KIZQ2M2Z5 673 aa19.61■□□□□ 0.73
CTNS-203ENST00000399306 SPECC1Q5M775 1068 aa19.61■□□□□ 0.73
CTNS-203ENST00000399306 RRAGBQ5VZM2 374 aa19.61■□□□□ 0.73
CTNS-203ENST00000399306 RINT1Q6NUQ1 792 aa19.61■□□□□ 0.73
CTNS-203ENST00000399306 SHC4Q6S5L8 630 aa19.61■□□□□ 0.73
CTNS-203ENST00000399306 CHRDL2Q6WN34 429 aa19.61■□□□□ 0.73
CTNS-203ENST00000399306 ZNF365Q70YC5 407 aa19.61■□□□□ 0.73
CTNS-203ENST00000399306 SRGAP1Q7Z6B7 1085 aa19.61■□□□□ 0.73
CTNS-203ENST00000399306 DEFB128Q7Z7B8 93 aa19.61■□□□□ 0.73
CTNS-203ENST00000399306 TDHQ8IZJ6 230 aa19.61■□□□□ 0.73
CTNS-203ENST00000399306 LARP4BQ92615 738 aaKnown RBP19.61■□□□□ 0.73
CTNS-203ENST00000399306 TMEM143Q96AN5 459 aa19.61■□□□□ 0.73
CTNS-203ENST00000399306 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.61■□□□□ 0.73
CTNS-203ENST00000399306 FTHL17Q9BXU8 183 aa19.61■□□□□ 0.73
CTNS-203ENST00000399306 IFIH1Q9BYX4 1025 aaKnown RBP19.61■□□□□ 0.73
CTNS-203ENST00000399306 GCOM2Q9BZD3 368 aaPredicted RBP19.61■□□□□ 0.73
CTNS-203ENST00000399306 RANBP2P49792 3224 aaKnown RBP19.6■□□□□ 0.73
CTNS-203ENST00000399306 MICAL3Q7RTP6 2002 aa19.6■□□□□ 0.73
CTNS-203ENST00000399306 A0A087WWV3 80 aa19.6■□□□□ 0.73
CTNS-203ENST00000399306 FAM237AA0A1B0GTK4 181 aa19.6■□□□□ 0.73
CTNS-203ENST00000399306 A0A1W2PQ27 194 aa19.6■□□□□ 0.73
CTNS-203ENST00000399306 A0A1W2PQ64 194 aa19.6■□□□□ 0.73
CTNS-203ENST00000399306 A0A1W2PQD8 194 aa19.6■□□□□ 0.73
CTNS-203ENST00000399306 GPR182O15218 404 aa19.6■□□□□ 0.73
CTNS-203ENST00000399306 DARSP14868 501 aaKnown RBP19.6■□□□□ 0.73
CTNS-203ENST00000399306 TMEM62Q0P6H9 643 aa19.6■□□□□ 0.73
CTNS-203ENST00000399306 IKBKEQ14164 716 aa19.6■□□□□ 0.73
CTNS-203ENST00000399306 PPP2R5AQ15172 486 aa19.6■□□□□ 0.73
CTNS-203ENST00000399306 CSPP1Q1MSJ5 1256 aa19.6■□□□□ 0.73
CTNS-203ENST00000399306 RHPN2Q8IUC4 686 aa19.6■□□□□ 0.73
CTNS-203ENST00000399306 NLRP7Q8WX94 980 aa19.6■□□□□ 0.73
CTNS-203ENST00000399306 DRC1Q96MC2 740 aa19.6■□□□□ 0.73
CTNS-203ENST00000399306 MAGEF1Q9HAY2 307 aa19.6■□□□□ 0.73
CTNS-203ENST00000399306 RPS6KA5O75582 802 aa19.59■□□□□ 0.73
CTNS-203ENST00000399306 GHRP10912 638 aa19.59■□□□□ 0.73
CTNS-203ENST00000399306 IQUBQ8NA54 791 aa19.59■□□□□ 0.73
CTNS-203ENST00000399306 DBF4BQ8NFT6 615 aa19.59■□□□□ 0.73
CTNS-203ENST00000399306 OSMRQ99650 979 aa19.59■□□□□ 0.73
CTNS-203ENST00000399306 POLR3FQ9H1D9 316 aaPredicted RBP19.59■□□□□ 0.73
CTNS-203ENST00000399306 CDHR5Q9HBB8 845 aa19.59■□□□□ 0.73
CTNS-203ENST00000399306 ODF2LQ9ULJ1 636 aa19.59■□□□□ 0.73
CTNS-203ENST00000399306 PHLPP2Q6ZVD8 1323 aa19.58■□□□□ 0.73
CTNS-203ENST00000399306 MYH11P35749 1972 aa19.58■□□□□ 0.73
CTNS-203ENST00000399306 A0A087WZ62 844 aa19.58■□□□□ 0.72
CTNS-203ENST00000399306 ACRP10323 421 aa19.58■□□□□ 0.72
CTNS-203ENST00000399306 SCP2P22307 547 aa19.58■□□□□ 0.72
CTNS-203ENST00000399306 GLRA2P23416 452 aa19.58■□□□□ 0.72
CTNS-203ENST00000399306 STAT6P42226 847 aa19.58■□□□□ 0.72
CTNS-203ENST00000399306 NAMPTP43490 491 aa19.58■□□□□ 0.72
CTNS-203ENST00000399306 PHKA2P46019 1235 aa19.58■□□□□ 0.72
CTNS-203ENST00000399306 PTENP60484 403 aa19.58■□□□□ 0.72
CTNS-203ENST00000399306 PAK2Q13177 524 aa19.58■□□□□ 0.72
CTNS-203ENST00000399306 NAALADL2Q58DX5 795 aa19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms