RNA–Protein interactions for RNA: ENST00000399127.5

COL25A1-202, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-202ENST00000399127 CCDC43Q96MW1 224 aaKnown RBP12.87□□□□□ -0.35
COL25A1-202ENST00000399127 TUBB2BQ9BVA1 445 aa12.87□□□□□ -0.35
COL25A1-202ENST00000399127 GBP3Q9H0R5 595 aa12.87□□□□□ -0.35
COL25A1-202ENST00000399127 GPRC5CQ9NQ84 441 aa12.87□□□□□ -0.35
COL25A1-202ENST00000399127 AGPAT3Q9NRZ7 376 aa12.87□□□□□ -0.35
COL25A1-202ENST00000399127 TCEAL9Q9UHQ7 104 aa12.87□□□□□ -0.35
COL25A1-202ENST00000399127 ODF2LQ9ULJ1 636 aa12.87□□□□□ -0.35
COL25A1-202ENST00000399127 DOCK1Q14185 1865 aa12.86□□□□□ -0.35
COL25A1-202ENST00000399127 SLC16A3O15427 465 aaKnown RBP12.86□□□□□ -0.35
COL25A1-202ENST00000399127 PEX10O60683 326 aa12.86□□□□□ -0.35
COL25A1-202ENST00000399127 USP2O75604 605 aaPredicted RBP12.86□□□□□ -0.35
COL25A1-202ENST00000399127 ZRANB2O95218 330 aaKnown RBP eCLIP12.86□□□□□ -0.35
COL25A1-202ENST00000399127 CCNE2O96020 404 aa12.86□□□□□ -0.35
COL25A1-202ENST00000399127 EPHX2P34913 555 aa12.86□□□□□ -0.35
COL25A1-202ENST00000399127 QARSP47897 775 aaKnown RBP12.86□□□□□ -0.35
COL25A1-202ENST00000399127 RARRES1P49788 294 aa12.86□□□□□ -0.35
COL25A1-202ENST00000399127 ASIC2Q16515 512 aa12.86□□□□□ -0.35
COL25A1-202ENST00000399127 KLHDC7AQ5VTJ3 777 aa12.86□□□□□ -0.35
COL25A1-202ENST00000399127 PAPD7Q5XG87 772 aaKnown RBP12.86□□□□□ -0.35
COL25A1-202ENST00000399127 PLA2G4FQ68DD2 849 aa12.86□□□□□ -0.35
COL25A1-202ENST00000399127 C10orf67Q8IYJ2 551 aa12.86□□□□□ -0.35
COL25A1-202ENST00000399127 PACSIN1Q9BY11 444 aa12.86□□□□□ -0.35
COL25A1-202ENST00000399127 PCIF1Q9H4Z3 704 aa12.86□□□□□ -0.35
COL25A1-202ENST00000399127 METTL14Q9HCE5 456 aaKnown RBP12.86□□□□□ -0.35
COL25A1-202ENST00000399127 POLR2AP24928 1970 aaKnown RBP12.86□□□□□ -0.35
COL25A1-202ENST00000399127 SSU72P8A0A1W2PR75 194 aa12.86□□□□□ -0.35
COL25A1-202ENST00000399127 NCK2O43639 380 aa12.86□□□□□ -0.35
COL25A1-202ENST00000399127 TACC1O75410 805 aa12.86□□□□□ -0.35
COL25A1-202ENST00000399127 MUTP22033 750 aa12.86□□□□□ -0.35
COL25A1-202ENST00000399127 YWHABP31946 246 aaKnown RBP12.86□□□□□ -0.35
COL25A1-202ENST00000399127 CXCR5P32302 372 aa12.86□□□□□ -0.35
COL25A1-202ENST00000399127 PSMC2P35998 433 aaKnown RBP12.86□□□□□ -0.35
COL25A1-202ENST00000399127 NPEPPSP55786 919 aa12.86□□□□□ -0.35
COL25A1-202ENST00000399127 GHRHRQ02643 423 aa12.86□□□□□ -0.35
COL25A1-202ENST00000399127 PTK2Q05397 1052 aa12.86□□□□□ -0.35
COL25A1-202ENST00000399127 TTLL12Q14166 644 aaPredicted RBP12.86□□□□□ -0.35
COL25A1-202ENST00000399127 RBM46Q8TBY0 533 aaKnown RBP12.86□□□□□ -0.35
COL25A1-202ENST00000399127 CAGE1Q8TC20 777 aa12.86□□□□□ -0.35
COL25A1-202ENST00000399127 NUCKS1Q9H1E3 243 aaKnown RBP12.86□□□□□ -0.35
COL25A1-202ENST00000399127 KCND2Q9NZV8 630 aa12.86□□□□□ -0.35
COL25A1-202ENST00000399127 SEL1LQ9UBV2 794 aa12.86□□□□□ -0.35
COL25A1-202ENST00000399127 TELO2Q9Y4R8 837 aa12.86□□□□□ -0.35
COL25A1-202ENST00000399127 COL11A1P12107 1806 aaPredicted RBP12.86□□□□□ -0.35
COL25A1-202ENST00000399127 BACH1O14867 736 aa12.85□□□□□ -0.35
COL25A1-202ENST00000399127 TRIM66O15016 1216 aa12.85□□□□□ -0.35
COL25A1-202ENST00000399127 SASH3O75995 380 aa12.85□□□□□ -0.35
COL25A1-202ENST00000399127 DNA2P51530 1060 aa12.85□□□□□ -0.35
COL25A1-202ENST00000399127 BMS1Q14692 1282 aaKnown RBP12.85□□□□□ -0.35
COL25A1-202ENST00000399127 GBP6Q6ZN66 633 aa12.85□□□□□ -0.35
COL25A1-202ENST00000399127 NIPA1Q7RTP0 329 aa12.85□□□□□ -0.35
COL25A1-202ENST00000399127 TRIM58Q8NG06 486 aa12.85□□□□□ -0.35
COL25A1-202ENST00000399127 SYN2Q92777 582 aaPredicted RBP12.85□□□□□ -0.35
COL25A1-202ENST00000399127 BORCS6Q96GS4 357 aa12.85□□□□□ -0.35
COL25A1-202ENST00000399127 TBC1D22BQ9NU19 505 aa12.85□□□□□ -0.35
COL25A1-202ENST00000399127 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.85□□□□□ -0.35
COL25A1-202ENST00000399127 SSC5DA1L4H1 1573 aa12.85□□□□□ -0.35
COL25A1-202ENST00000399127 PDE2AO00408 941 aaPredicted RBP12.85□□□□□ -0.35
COL25A1-202ENST00000399127 TMEM132BQ14DG7 1078 aa12.85□□□□□ -0.35
COL25A1-202ENST00000399127 NFRKBQ6P4R8 1299 aa12.85□□□□□ -0.35
COL25A1-202ENST00000399127 NEK9Q8TD19 979 aa12.85□□□□□ -0.35
COL25A1-202ENST00000399127 ARFGAP3Q9NP61 516 aa12.85□□□□□ -0.35
COL25A1-202ENST00000399127 SIX2Q9NPC8 291 aa12.85□□□□□ -0.35
COL25A1-202ENST00000399127 AIPL1Q9NZN9 384 aa12.85□□□□□ -0.35
COL25A1-202ENST00000399127 ZNF214Q9UL59 606 aaPredicted RBP12.85□□□□□ -0.35
COL25A1-202ENST00000399127 FRMD4BQ9Y2L6 1034 aa12.85□□□□□ -0.35
COL25A1-202ENST00000399127 MYO1CO00159 1063 aa12.84□□□□□ -0.35
COL25A1-202ENST00000399127 PPP1R12BO60237 982 aaPredicted RBP12.84□□□□□ -0.35
COL25A1-202ENST00000399127 EXOC3O60645 756 aa12.84□□□□□ -0.35
COL25A1-202ENST00000399127 TBC1D8O95759 1140 aa12.84□□□□□ -0.35
COL25A1-202ENST00000399127 NR3C2P08235 984 aa12.84□□□□□ -0.35
COL25A1-202ENST00000399127 SLC18A3Q16572 532 aa12.84□□□□□ -0.35
COL25A1-202ENST00000399127 CBWD6Q4V339 395 aa12.84□□□□□ -0.35
COL25A1-202ENST00000399127 CBWD3Q5JTY5 395 aa12.84□□□□□ -0.35
COL25A1-202ENST00000399127 CBWD5Q5RIA9 395 aa12.84□□□□□ -0.35
COL25A1-202ENST00000399127 STXBP4Q6ZWJ1 553 aa12.84□□□□□ -0.35
COL25A1-202ENST00000399127 ZNF571Q7Z3V5 609 aaPredicted RBP12.84□□□□□ -0.35
COL25A1-202ENST00000399127 IRF2BP2Q7Z5L9 587 aa12.84□□□□□ -0.35
COL25A1-202ENST00000399127 ZSWIM2Q8NEG5 633 aa12.84□□□□□ -0.35
COL25A1-202ENST00000399127 REPS2Q8NFH8 660 aa12.84□□□□□ -0.35
COL25A1-202ENST00000399127 COG1Q8WTW3 980 aa12.84□□□□□ -0.35
COL25A1-202ENST00000399127 HINFPQ9BQA5 517 aa12.84□□□□□ -0.35
COL25A1-202ENST00000399127 PLCB1Q9NQ66 1216 aa12.84□□□□□ -0.35
COL25A1-202ENST00000399127 SMARCAL1Q9NZC9 954 aa12.84□□□□□ -0.35
COL25A1-202ENST00000399127 LARSQ9P2J5 1176 aaKnown RBP12.84□□□□□ -0.35
COL25A1-202ENST00000399127 CLEC11AQ9Y240 323 aa12.84□□□□□ -0.35
COL25A1-202ENST00000399127 JRKLQ9Y4A0 524 aa12.84□□□□□ -0.35
COL25A1-202ENST00000399127 PARP14Q460N5 1801 aa12.84□□□□□ -0.35
COL25A1-202ENST00000399127 GLTPD2A6NH11 291 aa12.84□□□□□ -0.35
COL25A1-202ENST00000399127 DSG3P32926 999 aa12.84□□□□□ -0.35
COL25A1-202ENST00000399127 SOX10P56693 466 aa12.84□□□□□ -0.35
COL25A1-202ENST00000399127 VSNL1P62760 191 aa12.84□□□□□ -0.35
COL25A1-202ENST00000399127 VGLL4Q14135 290 aa12.84□□□□□ -0.35
COL25A1-202ENST00000399127 KIAA0753Q2KHM9 967 aa12.84□□□□□ -0.35
COL25A1-202ENST00000399127 XKR9Q5GH70 373 aa12.84□□□□□ -0.35
COL25A1-202ENST00000399127 MOB2Q70IA6 237 aa12.84□□□□□ -0.35
COL25A1-202ENST00000399127 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.84□□□□□ -0.35
COL25A1-202ENST00000399127 SUGCTQ9HAC7 445 aa12.84□□□□□ -0.35
COL25A1-202ENST00000399127 EHD2Q9NZN4 543 aa12.84□□□□□ -0.35
COL25A1-202ENST00000399127 TMOD4Q9NZQ9 345 aa12.84□□□□□ -0.35
COL25A1-202ENST00000399127 ANO9A1A5B4 782 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms