RNA–Protein interactions for RNA: ENST00000398868.7

ATL3-201, Transcript of atlastin GTPase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATL3, Length 7,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-201ENST00000398868 PDZD4Q76G19 769 aaPredicted RBP10□□□□□ -0.81
ATL3-201ENST00000398868 THEM5Q8N1Q8 247 aa10□□□□□ -0.81
ATL3-201ENST00000398868 URGCPQ8TCY9 931 aa10□□□□□ -0.81
ATL3-201ENST00000398868 TRAIPQ9BWF2 469 aa10□□□□□ -0.81
ATL3-201ENST00000398868 FAM217BQ9NTX9 383 aaPredicted RBP10□□□□□ -0.81
ATL3-201ENST00000398868 SAMD9Q5K651 1589 aa10□□□□□ -0.81
ATL3-201ENST00000398868 PP2D1A8MPX8 630 aa10□□□□□ -0.81
ATL3-201ENST00000398868 SEC24DO94855 1032 aaPredicted RBP10□□□□□ -0.81
ATL3-201ENST00000398868 PSMA2P25787 234 aa10□□□□□ -0.81
ATL3-201ENST00000398868 DHX9Q08211 1270 aaKnown RBP10□□□□□ -0.81
ATL3-201ENST00000398868 STXBP2Q15833 593 aa10□□□□□ -0.81
ATL3-201ENST00000398868 NUGGCQ68CJ6 796 aa10□□□□□ -0.81
ATL3-201ENST00000398868 NOP53Q9NZM5 478 aaKnown RBP10□□□□□ -0.81
ATL3-201ENST00000398868 TRIM49BA6NDI0 452 aa10□□□□□ -0.81
ATL3-201ENST00000398868 AFPP02771 609 aaKnown RBP10□□□□□ -0.81
ATL3-201ENST00000398868 GFAPP14136 432 aa10□□□□□ -0.81
ATL3-201ENST00000398868 BRD2P25440 801 aaKnown RBP10□□□□□ -0.81
ATL3-201ENST00000398868 WEE1P30291 646 aa10□□□□□ -0.81
ATL3-201ENST00000398868 POLR2BP30876 1174 aaKnown RBP10□□□□□ -0.81
ATL3-201ENST00000398868 AP1B1Q10567 949 aa10□□□□□ -0.81
ATL3-201ENST00000398868 NBPF20Q3BBV1 942 aa10□□□□□ -0.81
ATL3-201ENST00000398868 MMS22LQ6ZRQ5 1243 aa10□□□□□ -0.81
ATL3-201ENST00000398868 FBXO18Q8NFZ0 1043 aa10□□□□□ -0.81
ATL3-201ENST00000398868 ENOX1Q8TC92 643 aaKnown RBP10□□□□□ -0.81
ATL3-201ENST00000398868 TRPV6Q9H1D0 765 aa10□□□□□ -0.81
ATL3-201ENST00000398868 RNF146Q9NTX7 359 aa10□□□□□ -0.81
ATL3-201ENST00000398868 PIN4Q9Y237 131 aaKnown RBP10□□□□□ -0.81
ATL3-201ENST00000398868 GTPBP10A4D1E9 387 aaKnown RBP10□□□□□ -0.81
ATL3-201ENST00000398868 POTEFA5A3E0 1075 aa10□□□□□ -0.81
ATL3-201ENST00000398868 CLDN3O15551 220 aa10□□□□□ -0.81
ATL3-201ENST00000398868 POTEIP0CG38 1075 aa10□□□□□ -0.81
ATL3-201ENST00000398868 FLOT2Q14254 428 aa10□□□□□ -0.81
ATL3-201ENST00000398868 POTEGQ6S5H5 508 aa10□□□□□ -0.81
ATL3-201ENST00000398868 POTEEQ6S8J3 1075 aa10□□□□□ -0.81
ATL3-201ENST00000398868 FRA10AC1Q70Z53 315 aa10□□□□□ -0.81
ATL3-201ENST00000398868 GRK7Q8WTQ7 553 aa10□□□□□ -0.81
ATL3-201ENST00000398868 MAGEB10Q96LZ2 347 aaPredicted RBP10□□□□□ -0.81
ATL3-201ENST00000398868 PARVGQ9HBI0 331 aa10□□□□□ -0.81
ATL3-201ENST00000398868 ZNF229Q9UJW7 825 aa10□□□□□ -0.81
ATL3-201ENST00000398868 NFU1Q9UMS0 254 aa10□□□□□ -0.81
ATL3-201ENST00000398868 PDGFRBP09619 1106 aa9.99□□□□□ -0.81
ATL3-201ENST00000398868 MRPS15P82914 257 aaKnown RBP9.99□□□□□ -0.81
ATL3-201ENST00000398868 CDR2LQ86X02 465 aaPredicted RBP9.99□□□□□ -0.81
ATL3-201ENST00000398868 DRC3Q9H069 523 aa9.99□□□□□ -0.81
ATL3-201ENST00000398868 TYW1Q9NV66 732 aaKnown RBP9.99□□□□□ -0.81
ATL3-201ENST00000398868 MAPKBP1O60336 1514 aa9.99□□□□□ -0.81
ATL3-201ENST00000398868 RSPH10B2B2RC85 870 aa9.99□□□□□ -0.81
ATL3-201ENST00000398868 RSPH10BP0C881 870 aa9.99□□□□□ -0.81
ATL3-201ENST00000398868 RARBP10826 455 aa9.99□□□□□ -0.81
ATL3-201ENST00000398868 RECQLP46063 649 aaPredicted RBP9.99□□□□□ -0.81
ATL3-201ENST00000398868 CSE1LP55060 971 aaKnown RBP9.99□□□□□ -0.81
ATL3-201ENST00000398868 SCARF1Q14162 830 aa9.99□□□□□ -0.81
ATL3-201ENST00000398868 EPHA10Q5JZY3 1008 aa9.99□□□□□ -0.81
ATL3-201ENST00000398868 GPATCH4Q5T3I0 446 aaKnown RBP9.99□□□□□ -0.81
ATL3-201ENST00000398868 C11orf96Q7Z7L8 435 aa9.99□□□□□ -0.81
ATL3-201ENST00000398868 HPS3Q969F9 1004 aa9.99□□□□□ -0.81
ATL3-201ENST00000398868 IFT43Q96FT9 208 aa9.99□□□□□ -0.81
ATL3-201ENST00000398868 EIF2AQ9BY44 585 aaKnown RBP9.99□□□□□ -0.81
ATL3-201ENST00000398868 UBA6A0AVT1 1052 aaPredicted RBP9.99□□□□□ -0.81
ATL3-201ENST00000398868 MCF2LO15068 1137 aa9.99□□□□□ -0.81
ATL3-201ENST00000398868 CHGBP05060 677 aa9.99□□□□□ -0.81
ATL3-201ENST00000398868 PPP1R2P41236 205 aa9.99□□□□□ -0.81
ATL3-201ENST00000398868 COPB1P53618 953 aaKnown RBP9.99□□□□□ -0.81
ATL3-201ENST00000398868 CACUL1Q86Y37 369 aa9.99□□□□□ -0.81
ATL3-201ENST00000398868 RFWD2Q8NHY2 731 aa9.99□□□□□ -0.81
ATL3-201ENST00000398868 SNRNP27Q8WVK2 155 aaKnown RBP9.99□□□□□ -0.81
ATL3-201ENST00000398868 GINM1Q9NU53 330 aa9.99□□□□□ -0.81
ATL3-201ENST00000398868 TXLNGQ9NUQ3 528 aa9.99□□□□□ -0.81
ATL3-201ENST00000398868 E9PMD0 336 aa9.99□□□□□ -0.81
ATL3-201ENST00000398868 LRRC36Q1X8D7 754 aa9.99□□□□□ -0.81
ATL3-201ENST00000398868 CATSPER3Q86XQ3 398 aa9.99□□□□□ -0.81
ATL3-201ENST00000398868 BBS5Q8N3I7 341 aa9.99□□□□□ -0.81
ATL3-201ENST00000398868 L3MBTL3Q96JM7 780 aaPredicted RBP9.99□□□□□ -0.81
ATL3-201ENST00000398868 SEPT5Q99719 369 aaPredicted RBP9.99□□□□□ -0.81
ATL3-201ENST00000398868 SYCE1LA8MT33 242 aa9.99□□□□□ -0.81
ATL3-201ENST00000398868 SPTLC1O15269 473 aa9.99□□□□□ -0.81
ATL3-201ENST00000398868 PRPF4O43172 522 aaKnown RBP eCLIP9.99□□□□□ -0.81
ATL3-201ENST00000398868 MAP3K7CLP57077 242 aa9.99□□□□□ -0.81
ATL3-201ENST00000398868 DPCR1Q3MIW9 517 aa9.99□□□□□ -0.81
ATL3-201ENST00000398868 TRIM67Q6ZTA4 783 aa9.99□□□□□ -0.81
ATL3-201ENST00000398868 PCGF5Q86SE9 256 aa9.99□□□□□ -0.81
ATL3-201ENST00000398868 SH3KBP1Q96B97 665 aa9.99□□□□□ -0.81
ATL3-201ENST00000398868 RRAGCQ9HB90 399 aa9.99□□□□□ -0.81
ATL3-201ENST00000398868 ZNF302Q9NR11 478 aa9.99□□□□□ -0.81
ATL3-201ENST00000398868 RHBDL2Q9NX52 303 aa9.99□□□□□ -0.81
ATL3-201ENST00000398868 HUNKP57058 714 aa9.99□□□□□ -0.81
ATL3-201ENST00000398868 THEMIS2Q5TEJ8 643 aa9.99□□□□□ -0.81
ATL3-201ENST00000398868 TMEM270Q6UE05 265 aa9.99□□□□□ -0.81
ATL3-201ENST00000398868 CYB5R4Q7L1T6 521 aa9.99□□□□□ -0.81
ATL3-201ENST00000398868 HASPINQ8TF76 798 aa9.99□□□□□ -0.81
ATL3-201ENST00000398868 CD209Q9NNX6 404 aa9.99□□□□□ -0.81
ATL3-201ENST00000398868 EMILIN3Q9NT22 766 aa9.99□□□□□ -0.81
ATL3-201ENST00000398868 PASKQ96RG2 1323 aa9.98□□□□□ -0.81
ATL3-201ENST00000398868 POTEB3A0JP26 581 aa9.98□□□□□ -0.81
ATL3-201ENST00000398868 POTECB2RU33 542 aa9.98□□□□□ -0.81
ATL3-201ENST00000398868 KIF19Q2TAC6 998 aa9.98□□□□□ -0.81
ATL3-201ENST00000398868 POTEBQ6S5H4 581 aa9.98□□□□□ -0.81
ATL3-201ENST00000398868 CCDC33Q8N5R6 958 aa9.98□□□□□ -0.81
ATL3-201ENST00000398868 ZNF274Q96GC6 653 aaPredicted RBP9.98□□□□□ -0.81
ATL3-201ENST00000398868 ECT2Q9H8V3 914 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms