RNA–Protein interactions for RNA: ENST00000398743.6

PRAME-202, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-202ENST00000398743 DBR1Q9UK59 544 aaKnown RBP15.1■□□□□ 0.01
PRAME-202ENST00000398743 F8VZ95 297 aa15.09■□□□□ 0.01
PRAME-202ENST00000398743 EXOC3O60645 756 aa15.09■□□□□ 0.01
PRAME-202ENST00000398743 MAPTP10636 758 aaKnown RBP15.09■□□□□ 0.01
PRAME-202ENST00000398743 QARSP47897 775 aaKnown RBP15.09■□□□□ 0.01
PRAME-202ENST00000398743 MRPS9P82933 396 aaKnown RBP15.09■□□□□ 0.01
PRAME-202ENST00000398743 BFSP1Q12934 665 aa15.09■□□□□ 0.01
PRAME-202ENST00000398743 ALCAMQ13740 583 aa15.09■□□□□ 0.01
PRAME-202ENST00000398743 CBWD6Q4V339 395 aa15.09■□□□□ 0.01
PRAME-202ENST00000398743 MUM1L1Q5H9M0 696 aa15.09■□□□□ 0.01
PRAME-202ENST00000398743 CBWD3Q5JTY5 395 aa15.09■□□□□ 0.01
PRAME-202ENST00000398743 CBWD5Q5RIA9 395 aa15.09■□□□□ 0.01
PRAME-202ENST00000398743 MAEAQ7L5Y9 396 aa15.09■□□□□ 0.01
PRAME-202ENST00000398743 SAMD3Q8N6K7 520 aa15.09■□□□□ 0.01
PRAME-202ENST00000398743 AENQ8WTP8 325 aaKnown RBP15.09■□□□□ 0.01
PRAME-202ENST00000398743 ZBTB9Q96C00 473 aa15.09■□□□□ 0.01
PRAME-202ENST00000398743 GDAP1L1Q96MZ0 367 aa15.09■□□□□ 0.01
PRAME-202ENST00000398743 STK33Q9BYT3 514 aa15.09■□□□□ 0.01
PRAME-202ENST00000398743 TMEM206Q9H813 350 aa15.09■□□□□ 0.01
PRAME-202ENST00000398743 TBC1D22BQ9NU19 505 aa15.09■□□□□ 0.01
PRAME-202ENST00000398743 PSD3Q9NYI0 1048 aa15.09■□□□□ 0.01
PRAME-202ENST00000398743 NENFQ9UMX5 172 aa15.09■□□□□ 0.01
PRAME-202ENST00000398743 PACSIN2Q9UNF0 486 aaPredicted RBP15.09■□□□□ 0.01
PRAME-202ENST00000398743 FAN1Q9Y2M0 1017 aa15.09■□□□□ 0.01
PRAME-202ENST00000398743 CCDC66A2RUB6 948 aa15.09■□□□□ 0.01
PRAME-202ENST00000398743 EVI5O60447 810 aa15.09■□□□□ 0.01
PRAME-202ENST00000398743 CTNND1O60716 968 aaKnown RBP15.09■□□□□ 0.01
PRAME-202ENST00000398743 GFPT2O94808 682 aa15.09■□□□□ 0.01
PRAME-202ENST00000398743 TRIM49P0CI25 452 aa15.09■□□□□ 0.01
PRAME-202ENST00000398743 TRIM49CP0CI26 452 aa15.09■□□□□ 0.01
PRAME-202ENST00000398743 SOX5P35711 763 aa15.09■□□□□ 0.01
PRAME-202ENST00000398743 NOP2P46087 812 aaKnown RBP15.09■□□□□ 0.01
PRAME-202ENST00000398743 RARRES1P49788 294 aa15.09■□□□□ 0.01
PRAME-202ENST00000398743 DGKZQ13574 1117 aa15.09■□□□□ 0.01
PRAME-202ENST00000398743 FMNL3Q8IVF7 1028 aa15.09■□□□□ 0.01
PRAME-202ENST00000398743 TAF4BQ92750 862 aa15.09■□□□□ 0.01
PRAME-202ENST00000398743 PPP1R9AQ9ULJ8 1098 aa15.09■□□□□ 0.01
PRAME-202ENST00000398743 CTDP1Q9Y5B0 961 aaPredicted RBP15.09■□□□□ 0.01
PRAME-202ENST00000398743 LOXHD1Q8IVV2 1947 aa15.08■□□□□ 0.01
PRAME-202ENST00000398743 CES2O00748 559 aa15.08■□□□□ 0.01
PRAME-202ENST00000398743 LYPLA2O95372 231 aa15.08■□□□□ 0.01
PRAME-202ENST00000398743 H2AFZP0C0S5 128 aa15.08■□□□□ 0.01
PRAME-202ENST00000398743 VCAM1P19320 739 aa15.08■□□□□ 0.01
PRAME-202ENST00000398743 EIF2AK2P19525 551 aaKnown RBP15.08■□□□□ 0.01
PRAME-202ENST00000398743 BAG6P46379 1132 aa15.08■□□□□ 0.01
PRAME-202ENST00000398743 ZNF280AP59817 542 aaPredicted RBP15.08■□□□□ 0.01
PRAME-202ENST00000398743 RPS6P62753 249 aaKnown RBP15.08■□□□□ 0.01
PRAME-202ENST00000398743 MYL7Q01449 175 aa15.08■□□□□ 0.01
PRAME-202ENST00000398743 SLC7A5Q01650 507 aa15.08■□□□□ 0.01
PRAME-202ENST00000398743 SF3B2Q13435 895 aaKnown RBP15.08■□□□□ 0.01
PRAME-202ENST00000398743 PLS1Q14651 629 aa15.08■□□□□ 0.01
PRAME-202ENST00000398743 POTEAQ6S8J7 498 aa15.08■□□□□ 0.01
PRAME-202ENST00000398743 H2AFVQ71UI9 128 aa15.08■□□□□ 0.01
PRAME-202ENST00000398743 CCDC43Q96MW1 224 aaKnown RBP15.08■□□□□ 0.01
PRAME-202ENST00000398743 APEX2Q9UBZ4 518 aa15.08■□□□□ 0.01
PRAME-202ENST00000398743 DNAJC12Q9UKB3 198 aa15.08■□□□□ 0.01
PRAME-202ENST00000398743 PNMA2Q9UL42 364 aa15.08■□□□□ 0.01
PRAME-202ENST00000398743 INTUQ9ULD6 942 aa15.08■□□□□ 0.01
PRAME-202ENST00000398743 DAAM1Q9Y4D1 1078 aa15.08■□□□□ 0.01
PRAME-202ENST00000398743 DDX3XO00571 662 aaKnown RBP eCLIP15.08■□□□□ 02e-11■■□□□ 13.8
PRAME-202ENST00000398743 EGFRP00533 1210 aa15.08■□□□□ 0
PRAME-202ENST00000398743 TNFRSF8P28908 595 aa15.08■□□□□ 0
PRAME-202ENST00000398743 TGFB2P61812 414 aa15.08■□□□□ 0
PRAME-202ENST00000398743 MTMR2Q13614 643 aa15.08■□□□□ 0
PRAME-202ENST00000398743 PGM5Q15124 567 aa15.08■□□□□ 0
PRAME-202ENST00000398743 RPS6KA1Q15418 735 aa15.08■□□□□ 0
PRAME-202ENST00000398743 INPP4AQ96PE3 977 aaPredicted RBP15.08■□□□□ 0
PRAME-202ENST00000398743 TAAR1Q96RJ0 339 aa15.08■□□□□ 0
PRAME-202ENST00000398743 HINFPQ9BQA5 517 aa15.08■□□□□ 0
PRAME-202ENST00000398743 INTS2Q9H0H0 1204 aaKnown RBP15.08■□□□□ 0
PRAME-202ENST00000398743 RGS17Q9UGC6 210 aaPredicted RBP15.08■□□□□ 0
PRAME-202ENST00000398743 A0A0A6YYK5 440 aaPredicted RBP15.07■□□□□ 0
PRAME-202ENST00000398743 PHACTR2O75167 634 aa15.07■□□□□ 0
PRAME-202ENST00000398743 CCDC172P0C7W6 258 aa15.07■□□□□ 0
PRAME-202ENST00000398743 KRT13P13646 458 aa15.07■□□□□ 0
PRAME-202ENST00000398743 PLS3P13797 630 aa15.07■□□□□ 0
PRAME-202ENST00000398743 RPS12P25398 132 aaKnown RBP15.07■□□□□ 0
PRAME-202ENST00000398743 YWHABP31946 246 aaKnown RBP15.07■□□□□ 0
PRAME-202ENST00000398743 EPHB4P54760 987 aa15.07■□□□□ 0
PRAME-202ENST00000398743 MRPS25P82663 173 aaKnown RBP15.07■□□□□ 0
PRAME-202ENST00000398743 DRAP1Q14919 205 aaPredicted RBP15.07■□□□□ 0
PRAME-202ENST00000398743 DALRD3Q5D0E6 543 aaKnown RBP15.07■□□□□ 0
PRAME-202ENST00000398743 LRRC57Q8N9N7 239 aa15.07■□□□□ 0
PRAME-202ENST00000398743 RDH13Q8NBN7 331 aa15.07■□□□□ 0
PRAME-202ENST00000398743 ACCSQ96QU6 501 aa15.07■□□□□ 0
PRAME-202ENST00000398743 MYH10P35580 1976 aa15.07■□□□□ 0
PRAME-202ENST00000398743 ZC3H4Q9UPT8 1303 aaKnown RBP15.07■□□□□ 0
PRAME-202ENST00000398743 ZBED4O75132 1171 aa15.07■□□□□ 0
PRAME-202ENST00000398743 KIF4AO95239 1232 aa15.07■□□□□ 0
PRAME-202ENST00000398743 SYF2O95926 243 aaKnown RBP15.07■□□□□ 0
PRAME-202ENST00000398743 LMNB1P20700 586 aa15.07■□□□□ 0
PRAME-202ENST00000398743 RFX1P22670 979 aa15.07■□□□□ 0
PRAME-202ENST00000398743 INTS8Q75QN2 995 aaKnown RBP15.07■□□□□ 0
PRAME-202ENST00000398743 DEFB132Q7Z7B7 95 aa15.07■□□□□ 0
PRAME-202ENST00000398743 DNAAF5Q86Y56 855 aa15.07■□□□□ 0
PRAME-202ENST00000398743 TPCN2Q8NHX9 752 aa15.07■□□□□ 0
PRAME-202ENST00000398743 U2AF1L4Q8WU68 220 aaKnown RBP15.07■□□□□ 0
PRAME-202ENST00000398743 TMEM174Q8WUU8 243 aa15.07■□□□□ 0
PRAME-202ENST00000398743 LMBR1Q8WVP7 490 aa15.07■□□□□ 0
PRAME-202ENST00000398743 TIPINQ9BVW5 301 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms