RNA–Protein interactions for RNA: ENST00000398317.2

NIFKP1-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 1, humanhuman

BASIC

Gene NIFKP1, Length 889 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP1-201ENST00000398317 DLX2Q07687 328 aaPredicted RBP11.15□□□□□ -0.62
NIFKP1-201ENST00000398317 APOBRQ0VD83 1088 aa11.15□□□□□ -0.62
NIFKP1-201ENST00000398317 HYAL1Q12794 435 aa11.15□□□□□ -0.62
NIFKP1-201ENST00000398317 PAK2Q13177 524 aa11.15□□□□□ -0.62
NIFKP1-201ENST00000398317 AP3B2Q13367 1082 aa11.15□□□□□ -0.62
NIFKP1-201ENST00000398317 COL19A1Q14993 1142 aa11.15□□□□□ -0.62
NIFKP1-201ENST00000398317 ABHD15Q6UXT9 468 aa11.15□□□□□ -0.62
NIFKP1-201ENST00000398317 TRMT1LQ7Z2T5 733 aaKnown RBP11.15□□□□□ -0.62
NIFKP1-201ENST00000398317 PLA2G4DQ86XP0 818 aa11.15□□□□□ -0.62
NIFKP1-201ENST00000398317 NPAS4Q8IUM7 802 aa11.15□□□□□ -0.62
NIFKP1-201ENST00000398317 TNPO1Q92973 898 aaKnown RBP11.15□□□□□ -0.62
NIFKP1-201ENST00000398317 FAM122AQ96E09 287 aa11.15□□□□□ -0.62
NIFKP1-201ENST00000398317 FTHL17Q9BXU8 183 aa11.15□□□□□ -0.62
NIFKP1-201ENST00000398317 LMAN2LQ9H0V9 348 aa11.15□□□□□ -0.62
NIFKP1-201ENST00000398317 TMX1Q9H3N1 280 aa11.15□□□□□ -0.62
NIFKP1-201ENST00000398317 GINS2Q9Y248 185 aa11.15□□□□□ -0.62
NIFKP1-201ENST00000398317 SQORQ9Y6N5 450 aa11.15□□□□□ -0.62
NIFKP1-201ENST00000398317 IGSF9BQ9UPX0 1349 aa11.14□□□□□ -0.63
NIFKP1-201ENST00000398317 IGKV6D-21A0A0A0MT36 114 aa11.14□□□□□ -0.63
NIFKP1-201ENST00000398317 SMIM35A0A1B0GVV1 85 aa11.14□□□□□ -0.63
NIFKP1-201ENST00000398317 hCG_1984214I3L0E3 225 aa11.14□□□□□ -0.63
NIFKP1-201ENST00000398317 HBP1O60381 514 aa11.14□□□□□ -0.63
NIFKP1-201ENST00000398317 PPFIA3O75145 1194 aa11.14□□□□□ -0.63
NIFKP1-201ENST00000398317 CDC45O75419 566 aa11.14□□□□□ -0.63
NIFKP1-201ENST00000398317 RPLP2P05387 115 aaKnown RBP11.14□□□□□ -0.63
NIFKP1-201ENST00000398317 SCG2P13521 617 aa11.14□□□□□ -0.63
NIFKP1-201ENST00000398317 ATP4AP20648 1035 aa11.14□□□□□ -0.63
NIFKP1-201ENST00000398317 DNAJB1P25685 340 aa11.14□□□□□ -0.63
NIFKP1-201ENST00000398317 METAP2P50579 478 aaKnown RBP eCLIP11.14□□□□□ -0.63
NIFKP1-201ENST00000398317 NFX1Q12986 1120 aaKnown RBP11.14□□□□□ -0.63
NIFKP1-201ENST00000398317 CAMK1Q14012 370 aa11.14□□□□□ -0.63
NIFKP1-201ENST00000398317 KRT32Q14532 448 aa11.14□□□□□ -0.63
NIFKP1-201ENST00000398317 PFKFB3Q16875 520 aaPredicted RBP11.14□□□□□ -0.63
NIFKP1-201ENST00000398317 CTC1Q2NKJ3 1217 aa11.14□□□□□ -0.63
NIFKP1-201ENST00000398317 FAM160B1Q5W0V3 765 aa11.14□□□□□ -0.63
NIFKP1-201ENST00000398317 SWSAP1Q6NVH7 229 aa11.14□□□□□ -0.63
NIFKP1-201ENST00000398317 PDXDC2PQ6P474 469 aa11.14□□□□□ -0.63
NIFKP1-201ENST00000398317 Q6ZUG5 572 aa11.14□□□□□ -0.63
NIFKP1-201ENST00000398317 CENPQQ7L2Z9 268 aaPredicted RBP11.14□□□□□ -0.63
NIFKP1-201ENST00000398317 NIPA1Q7RTP0 329 aa11.14□□□□□ -0.63
NIFKP1-201ENST00000398317 CCDC60Q8IWA6 550 aaPredicted RBP11.14□□□□□ -0.63
NIFKP1-201ENST00000398317 CRIPAKQ8N1N5 446 aa11.14□□□□□ -0.63
NIFKP1-201ENST00000398317 NME8Q8N427 588 aa11.14□□□□□ -0.63
NIFKP1-201ENST00000398317 ZNF713Q8N859 430 aaPredicted RBP11.14□□□□□ -0.63
NIFKP1-201ENST00000398317 PPP1R16BQ96T49 567 aa11.14□□□□□ -0.63
NIFKP1-201ENST00000398317 PLVAPQ9BX97 442 aa11.14□□□□□ -0.63
NIFKP1-201ENST00000398317 GLT8D2Q9H1C3 349 aa11.14□□□□□ -0.63
NIFKP1-201ENST00000398317 ZNF302Q9NR11 478 aa11.14□□□□□ -0.63
NIFKP1-201ENST00000398317 PLAGL2Q9UPG8 496 aa11.14□□□□□ -0.63
NIFKP1-201ENST00000398317 KDM3AQ9Y4C1 1321 aa11.13□□□□□ -0.63
NIFKP1-201ENST00000398317 IGLV3-22A0A075B6J6 115 aa11.13□□□□□ -0.63
NIFKP1-201ENST00000398317 ZBTB42B2RXF5 422 aa11.13□□□□□ -0.63
NIFKP1-201ENST00000398317 IPO5O00410 1097 aaKnown RBP11.13□□□□□ -0.63
NIFKP1-201ENST00000398317 LINC01565O15544 149 aa11.13□□□□□ -0.63
NIFKP1-201ENST00000398317 DHX15O43143 795 aaKnown RBP11.13□□□□□ -0.63
NIFKP1-201ENST00000398317 NCK2O43639 380 aa11.13□□□□□ -0.63
NIFKP1-201ENST00000398317 MGEA5O60502 916 aa11.13□□□□□ -0.63
NIFKP1-201ENST00000398317 MMP1P03956 469 aa11.13□□□□□ -0.63
NIFKP1-201ENST00000398317 ITGB1P05556 798 aa11.13□□□□□ -0.63
NIFKP1-201ENST00000398317 STAG3L1P0CL83 205 aa11.13□□□□□ -0.63
NIFKP1-201ENST00000398317 SLC26A2P50443 739 aa11.13□□□□□ -0.63
NIFKP1-201ENST00000398317 MIS18BP1Q6P0N0 1132 aa11.13□□□□□ -0.63
NIFKP1-201ENST00000398317 TEX2Q8IWB9 1127 aa11.13□□□□□ -0.63
NIFKP1-201ENST00000398317 CMTR2Q8IYT2 770 aaKnown RBP11.13□□□□□ -0.63
NIFKP1-201ENST00000398317 KIAA0319LQ8IZA0 1049 aa11.13□□□□□ -0.63
NIFKP1-201ENST00000398317 KLHL23Q8NBE8 558 aa11.13□□□□□ -0.63
NIFKP1-201ENST00000398317 SPPL3Q8TCT6 385 aa11.13□□□□□ -0.63
NIFKP1-201ENST00000398317 RASGRP4Q8TDF6 673 aa11.13□□□□□ -0.63
NIFKP1-201ENST00000398317 ATP8B4Q8TF62 1192 aa11.13□□□□□ -0.63
NIFKP1-201ENST00000398317 TMEM40Q8WWA1 233 aa11.13□□□□□ -0.63
NIFKP1-201ENST00000398317 JAKMIP1Q96N16 626 aaKnown RBP11.13□□□□□ -0.63
NIFKP1-201ENST00000398317 ZNF577Q9BSK1 485 aa11.13□□□□□ -0.63
NIFKP1-201ENST00000398317 ERVK-5Q9HDB9 667 aa11.13□□□□□ -0.63
NIFKP1-201ENST00000398317 LRFN2Q9ULH4 789 aa11.13□□□□□ -0.63
NIFKP1-201ENST00000398317 HCN4Q9Y3Q4 1203 aa11.13□□□□□ -0.63
NIFKP1-201ENST00000398317 NOC2LQ9Y3T9 749 aaKnown RBP11.13□□□□□ -0.63
NIFKP1-201ENST00000398317 GFRA3O60609 400 aa11.12□□□□□ -0.63
NIFKP1-201ENST00000398317 TBX10O75333 385 aa11.12□□□□□ -0.63
NIFKP1-201ENST00000398317 RPS6KA5O75582 802 aa11.12□□□□□ -0.63
NIFKP1-201ENST00000398317 CYP3A4P08684 503 aa11.12□□□□□ -0.63
NIFKP1-201ENST00000398317 HMGB1P09429 215 aaKnown RBP11.12□□□□□ -0.63
NIFKP1-201ENST00000398317 IRS1P35568 1242 aa11.12□□□□□ -0.63
NIFKP1-201ENST00000398317 SARSP49591 514 aaKnown RBP11.12□□□□□ -0.63
NIFKP1-201ENST00000398317 RCAN1P53805 252 aa11.12□□□□□ -0.63
NIFKP1-201ENST00000398317 ZP2Q05996 745 aa11.12□□□□□ -0.63
NIFKP1-201ENST00000398317 PKN1Q16512 942 aa11.12□□□□□ -0.63
NIFKP1-201ENST00000398317 KIZQ2M2Z5 673 aa11.12□□□□□ -0.63
NIFKP1-201ENST00000398317 ZNF484Q5JVG2 852 aa11.12□□□□□ -0.63
NIFKP1-201ENST00000398317 TRIM67Q6ZTA4 783 aa11.12□□□□□ -0.63
NIFKP1-201ENST00000398317 ADGRD2Q7Z7M1 963 aa11.12□□□□□ -0.63
NIFKP1-201ENST00000398317 CKAP2LQ8IYA6 745 aa11.12□□□□□ -0.63
NIFKP1-201ENST00000398317 CRYGNQ8WXF5 182 aa11.12□□□□□ -0.63
NIFKP1-201ENST00000398317 BRF1Q92994 677 aa11.12□□□□□ -0.63
NIFKP1-201ENST00000398317 PHKBQ93100 1093 aa11.12□□□□□ -0.63
NIFKP1-201ENST00000398317 ADAM2Q99965 735 aa11.12□□□□□ -0.63
NIFKP1-201ENST00000398317 ZMYND12Q9H0C1 365 aa11.12□□□□□ -0.63
NIFKP1-201ENST00000398317 C6orf50Q9HD87 102 aa11.12□□□□□ -0.63
NIFKP1-201ENST00000398317 FAM50BQ9Y247 325 aa11.12□□□□□ -0.63
NIFKP1-201ENST00000398317 PCDHB7Q9Y5E2 793 aa11.12□□□□□ -0.63
NIFKP1-201ENST00000398317 PCDHGC5Q9Y5F6 944 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms