RNA–Protein interactions for RNA: ENST00000398020.6

TMEM55B-202, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-202ENST00000398020 SCAND2PQ9GZW5 306 aaPredicted RBP28.22■■■□□ 2.11
TMEM55B-202ENST00000398020 POLD4Q9HCU8 107 aa28.22■■■□□ 2.11
TMEM55B-202ENST00000398020 GPRC5CQ9NQ84 441 aa28.22■■■□□ 2.11
TMEM55B-202ENST00000398020 LOXHD1Q8IVV2 1947 aa28.21■■■□□ 2.11
TMEM55B-202ENST00000398020 SLC26A4O43511 780 aa28.21■■■□□ 2.11
TMEM55B-202ENST00000398020 GPR32O75388 356 aa28.21■■■□□ 2.11
TMEM55B-202ENST00000398020 RPUSD2Q8IZ73 545 aaKnown RBP28.21■■■□□ 2.11
TMEM55B-202ENST00000398020 PRPF31Q8WWY3 499 aaKnown RBP28.21■■■□□ 2.11
TMEM55B-202ENST00000398020 BUD13Q9BRD0 619 aaKnown RBP eCLIP28.21■■■□□ 2.113e-6■□□□□ 9.1
TMEM55B-202ENST00000398020 CCDC39Q9UFE4 941 aa28.21■■■□□ 2.11
TMEM55B-202ENST00000398020 A0A087X0B3 334 aa28.2■■■□□ 2.11
TMEM55B-202ENST00000398020 PLA2G4BP0C869 781 aa28.2■■■□□ 2.11
TMEM55B-202ENST00000398020 GPC3P51654 580 aa28.2■■■□□ 2.11
TMEM55B-202ENST00000398020 DHX8Q14562 1220 aaKnown RBP28.2■■■□□ 2.11
TMEM55B-202ENST00000398020 C9orf50Q5SZB4 431 aa28.2■■■□□ 2.11
TMEM55B-202ENST00000398020 ZNF365Q70YC5 407 aa28.2■■■□□ 2.11
TMEM55B-202ENST00000398020 PDILTQ8N807 584 aa28.2■■■□□ 2.11
TMEM55B-202ENST00000398020 TMEM40Q8WWA1 233 aa28.2■■■□□ 2.11
TMEM55B-202ENST00000398020 SCLT1Q96NL6 688 aa28.2■■■□□ 2.11
TMEM55B-202ENST00000398020 BLOC1S4Q9NUP1 217 aa28.2■■■□□ 2.11
TMEM55B-202ENST00000398020 GAS2O43903 313 aaKnown RBP28.19■■■□□ 2.1
TMEM55B-202ENST00000398020 PARNO95453 639 aaKnown RBP28.19■■■□□ 2.1
TMEM55B-202ENST00000398020 LPIN1Q14693 890 aa28.19■■■□□ 2.1
TMEM55B-202ENST00000398020 TCTN1Q2MV58 587 aa28.19■■■□□ 2.1
TMEM55B-202ENST00000398020 FBXO47Q5MNV8 452 aa28.19■■■□□ 2.1
TMEM55B-202ENST00000398020 NLRP7Q8WX94 980 aa28.19■■■□□ 2.1
TMEM55B-202ENST00000398020 PSPC1Q8WXF1 523 aaKnown RBP28.19■■■□□ 2.1
TMEM55B-202ENST00000398020 NLRP4Q96MN2 994 aa28.19■■■□□ 2.1
TMEM55B-202ENST00000398020 RUSC1Q9BVN2 902 aa28.19■■■□□ 2.1
TMEM55B-202ENST00000398020 ADAMTS10Q9H324 1103 aa28.19■■■□□ 2.1
TMEM55B-202ENST00000398020 COLQQ9Y215 455 aaPredicted RBP28.19■■■□□ 2.1
TMEM55B-202ENST00000398020 LAMA3Q16787 3333 aa28.19■■■□□ 2.1
TMEM55B-202ENST00000398020 CXCL10P02778 98 aa28.19■■■□□ 2.1
TMEM55B-202ENST00000398020 CYP11B2P19099 503 aa28.19■■■□□ 2.1
TMEM55B-202ENST00000398020 TMEM240Q5SV17 173 aa28.19■■■□□ 2.1
TMEM55B-202ENST00000398020 FAM102BQ5T8I3 360 aa28.19■■■□□ 2.1
TMEM55B-202ENST00000398020 RRAGBQ5VZM2 374 aa28.19■■■□□ 2.1
TMEM55B-202ENST00000398020 OTOP2Q7RTS6 562 aa28.19■■■□□ 2.1
TMEM55B-202ENST00000398020 TCP11Q8WWU5 503 aa28.19■■■□□ 2.1
TMEM55B-202ENST00000398020 POLR3FQ9H1D9 316 aaPredicted RBP28.19■■■□□ 2.1
TMEM55B-202ENST00000398020 COL4A3BPQ9Y5P4 624 aa28.19■■■□□ 2.1
TMEM55B-202ENST00000398020 SLC12A3P55017 1021 aa28.18■■■□□ 2.1
TMEM55B-202ENST00000398020 LAMTOR4Q0VGL1 99 aa28.18■■■□□ 2.1
TMEM55B-202ENST00000398020 MCM6Q14566 821 aa28.18■■■□□ 2.1
TMEM55B-202ENST00000398020 RINT1Q6NUQ1 792 aa28.18■■■□□ 2.1
TMEM55B-202ENST00000398020 KCTD17Q8N5Z5 321 aa28.18■■■□□ 2.1
TMEM55B-202ENST00000398020 MCPH1Q8NEM0 835 aa28.18■■■□□ 2.1
TMEM55B-202ENST00000398020 RAD54LQ92698 747 aa28.18■■■□□ 2.1
TMEM55B-202ENST00000398020 PRO3102Q9H379 93 aa28.18■■■□□ 2.1
TMEM55B-202ENST00000398020 AGO3Q9H9G7 860 aaKnown RBP28.18■■■□□ 2.1
TMEM55B-202ENST00000398020 A0A087WZ62 844 aa28.17■■■□□ 2.1
TMEM55B-202ENST00000398020 FGBP02675 491 aa28.17■■■□□ 2.1
TMEM55B-202ENST00000398020 BMP8BP34820 402 aa28.17■■■□□ 2.1
TMEM55B-202ENST00000398020 CRYBB1P53674 252 aaPredicted RBP28.17■■■□□ 2.1
TMEM55B-202ENST00000398020 RAD51AP2Q09MP3 1159 aa28.17■■■□□ 2.1
TMEM55B-202ENST00000398020 SHHQ15465 462 aa28.17■■■□□ 2.1
TMEM55B-202ENST00000398020 SYT2Q8N9I0 419 aaPredicted RBP28.17■■■□□ 2.1
TMEM55B-202ENST00000398020 DBF4BQ8NFT6 615 aa28.17■■■□□ 2.1
TMEM55B-202ENST00000398020 ASAP3Q8TDY4 903 aa28.17■■■□□ 2.1
TMEM55B-202ENST00000398020 FDXACB1Q9BRP7 624 aaPredicted RBP28.17■■■□□ 2.1
TMEM55B-202ENST00000398020 CSDE1O75534 798 aaKnown RBP28.16■■■□□ 2.1
TMEM55B-202ENST00000398020 PFKMP08237 780 aa28.16■■■□□ 2.1
TMEM55B-202ENST00000398020 SRGAP2CP0DJJ0 459 aa28.16■■■□□ 2.1
TMEM55B-202ENST00000398020 CD52P31358 61 aa28.16■■■□□ 2.1
TMEM55B-202ENST00000398020 RESP18Q5W5W9 173 aa28.16■■■□□ 2.1
TMEM55B-202ENST00000398020 PSRC1Q6PGN9 363 aaPredicted RBP28.16■■■□□ 2.1
TMEM55B-202ENST00000398020 IFIH1Q9BYX4 1025 aaKnown RBP28.16■■■□□ 2.1
TMEM55B-202ENST00000398020 NOC2LQ9Y3T9 749 aaKnown RBP28.16■■■□□ 2.1
TMEM55B-202ENST00000398020 ARL2P36404 184 aa28.16■■■□□ 2.1
TMEM55B-202ENST00000398020 STAT6P42226 847 aa28.16■■■□□ 2.1
TMEM55B-202ENST00000398020 NAALADL2Q58DX5 795 aa28.16■■■□□ 2.1
TMEM55B-202ENST00000398020 PLEKHG4Q58EX7 1191 aa28.16■■■□□ 2.1
TMEM55B-202ENST00000398020 TSHZ1Q6ZSZ6 1077 aa28.16■■■□□ 2.1
TMEM55B-202ENST00000398020 C1orf186Q6ZWK4 172 aa28.16■■■□□ 2.1
TMEM55B-202ENST00000398020 LARP4BQ92615 738 aaKnown RBP28.16■■■□□ 2.1
TMEM55B-202ENST00000398020 ADALQ6DHV7 355 aa28.15■■■□□ 2.1
TMEM55B-202ENST00000398020 CCDC73Q6ZRK6 1079 aa28.15■■■□□ 2.1
TMEM55B-202ENST00000398020 NPHP3-ACAD11A0A0J9YXS1 232 aa28.14■■■□□ 2.1
TMEM55B-202ENST00000398020 GLRA2P23416 452 aa28.14■■■□□ 2.1
TMEM55B-202ENST00000398020 CNKSR3Q6P9H4 555 aa28.14■■■□□ 2.1
TMEM55B-202ENST00000398020 RNF149Q8NC42 400 aa28.14■■■□□ 2.1
TMEM55B-202ENST00000398020 FAM13BQ9NYF5 915 aa28.14■■■□□ 2.1
TMEM55B-202ENST00000398020 STK17AQ9UEE5 414 aa28.14■■■□□ 2.1
TMEM55B-202ENST00000398020 FGFR4P22455 802 aa28.13■■■□□ 2.09
TMEM55B-202ENST00000398020 CACNB1Q02641 598 aaPredicted RBP28.13■■■□□ 2.09
TMEM55B-202ENST00000398020 CAPSQ13938 189 aa28.13■■■□□ 2.09
TMEM55B-202ENST00000398020 MXD4Q14582 209 aaPredicted RBP28.13■■■□□ 2.09
TMEM55B-202ENST00000398020 ARSHQ5FYA8 562 aa28.13■■■□□ 2.09
TMEM55B-202ENST00000398020 GPBP1Q86WP2 473 aa28.13■■■□□ 2.09
TMEM55B-202ENST00000398020 SEPT8Q92599 483 aa28.13■■■□□ 2.09
TMEM55B-202ENST00000398020 CXXC1Q9P0U4 656 aaPredicted RBP28.13■■■□□ 2.09
TMEM55B-202ENST00000398020 PADI3Q9ULW8 664 aa28.13■■■□□ 2.09
TMEM55B-202ENST00000398020 ZBBXA8MT70 800 aa28.13■■■□□ 2.09
TMEM55B-202ENST00000398020 HIP1RO75146 1068 aa28.13■■■□□ 2.09
TMEM55B-202ENST00000398020 RPS6KA5O75582 802 aa28.13■■■□□ 2.09
TMEM55B-202ENST00000398020 DARSP14868 501 aaKnown RBP28.13■■■□□ 2.09
TMEM55B-202ENST00000398020 EIF4BP23588 611 aaKnown RBP28.13■■■□□ 2.09
TMEM55B-202ENST00000398020 CDC42EP1Q00587 391 aa28.13■■■□□ 2.09
TMEM55B-202ENST00000398020 NFX1Q12986 1120 aaKnown RBP28.13■■■□□ 2.09
TMEM55B-202ENST00000398020 PAK2Q13177 524 aa28.13■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms