RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 CTNNA1P35221 906 aaKnown RBP17.33■□□□□ 0.37
CHMP1A-201ENST00000397901 PPP1R18Q6NYC8 613 aa17.33■□□□□ 0.37
CHMP1A-201ENST00000397901 METTL13Q8N6R0 699 aa17.33■□□□□ 0.37
CHMP1A-201ENST00000397901 LRRC57Q8N9N7 239 aa17.33■□□□□ 0.37
CHMP1A-201ENST00000397901 RBM46Q8TBY0 533 aaKnown RBP17.33■□□□□ 0.37
CHMP1A-201ENST00000397901 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.33■□□□□ 0.37
CHMP1A-201ENST00000397901 RAPGEF5Q92565 580 aa17.33■□□□□ 0.37
CHMP1A-201ENST00000397901 L3MBTL3Q96JM7 780 aaPredicted RBP17.33■□□□□ 0.37
CHMP1A-201ENST00000397901 PBKQ96KB5 322 aa17.33■□□□□ 0.37
CHMP1A-201ENST00000397901 ARMCX3Q9UH62 379 aaPredicted RBP17.33■□□□□ 0.37
CHMP1A-201ENST00000397901 CFAP73A6NFT4 308 aa17.33■□□□□ 0.36
CHMP1A-201ENST00000397901 PGRMC1O00264 195 aaKnown RBP17.33■□□□□ 0.36
CHMP1A-201ENST00000397901 FLT3P36888 993 aa17.33■□□□□ 0.36
CHMP1A-201ENST00000397901 TCERG1LQ5VWI1 586 aa17.33■□□□□ 0.36
CHMP1A-201ENST00000397901 RUFY4Q6ZNE9 571 aa17.33■□□□□ 0.36
CHMP1A-201ENST00000397901 UBLCP1Q8WVY7 318 aaPredicted RBP17.33■□□□□ 0.36
CHMP1A-201ENST00000397901 ZNF570Q96NI8 536 aa17.33■□□□□ 0.36
CHMP1A-201ENST00000397901 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.33■□□□□ 0.361e-9■□□□□ 8
CHMP1A-201ENST00000397901 AJAP1Q9UKB5 411 aaPredicted RBP17.33■□□□□ 0.36
CHMP1A-201ENST00000397901 FOCADQ5VW36 1801 aa17.33■□□□□ 0.36
CHMP1A-201ENST00000397901 KRIT1O00522 736 aa17.32■□□□□ 0.36
CHMP1A-201ENST00000397901 AFPP02771 609 aaKnown RBP17.32■□□□□ 0.36
CHMP1A-201ENST00000397901 PON1P27169 355 aa17.32■□□□□ 0.36
CHMP1A-201ENST00000397901 PPP2R2AP63151 447 aa17.32■□□□□ 0.36
CHMP1A-201ENST00000397901 ZNF844Q08AG5 666 aa17.32■□□□□ 0.36
CHMP1A-201ENST00000397901 CUL1Q13616 776 aa17.32■□□□□ 0.36
CHMP1A-201ENST00000397901 EXOC3L4Q17RC7 722 aa17.32■□□□□ 0.36
CHMP1A-201ENST00000397901 SLC5A9Q2M3M2 681 aa17.32■□□□□ 0.36
CHMP1A-201ENST00000397901 DPY19L2P1Q6NXN4 242 aa17.32■□□□□ 0.36
CHMP1A-201ENST00000397901 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.32■□□□□ 0.36
CHMP1A-201ENST00000397901 SP8Q8IXZ3 490 aa17.32■□□□□ 0.36
CHMP1A-201ENST00000397901 TPCN2Q8NHX9 752 aa17.32■□□□□ 0.36
CHMP1A-201ENST00000397901 CNKSR2Q8WXI2 1034 aa17.32■□□□□ 0.36
CHMP1A-201ENST00000397901 AMACRQ9UHK6 382 aa17.32■□□□□ 0.36
CHMP1A-201ENST00000397901 FBXL5Q9UKA1 691 aa17.32■□□□□ 0.36
CHMP1A-201ENST00000397901 BTNL10A8MVZ5 291 aa17.32■□□□□ 0.36
CHMP1A-201ENST00000397901 F8W031 263 aaPredicted RBP17.32■□□□□ 0.36
CHMP1A-201ENST00000397901 H0YGN5 161 aa17.32■□□□□ 0.36
CHMP1A-201ENST00000397901 C6orf229H3BNL8 230 aa17.32■□□□□ 0.36
CHMP1A-201ENST00000397901 DAPK3O43293 454 aa17.32■□□□□ 0.36
CHMP1A-201ENST00000397901 TTLL1O95922 423 aa17.32■□□□□ 0.36
CHMP1A-201ENST00000397901 TMOD1P28289 359 aa17.32■□□□□ 0.36
CHMP1A-201ENST00000397901 SLC12A3P55017 1021 aa17.32■□□□□ 0.36
CHMP1A-201ENST00000397901 PSMC6P62333 389 aa17.32■□□□□ 0.36
CHMP1A-201ENST00000397901 PABPC4Q13310 644 aaKnown RBP eCLIP17.32■□□□□ 0.364e-8■■□□□ 14.2
CHMP1A-201ENST00000397901 EDRF1Q3B7T1 1238 aa17.32■□□□□ 0.36
CHMP1A-201ENST00000397901 GJB7Q6PEY0 223 aa17.32■□□□□ 0.36
CHMP1A-201ENST00000397901 PEX26Q7Z412 305 aa17.32■□□□□ 0.36
CHMP1A-201ENST00000397901 ZC3H3Q8IXZ2 948 aaKnown RBP17.32■□□□□ 0.36
CHMP1A-201ENST00000397901 ACTRT1Q8TDG2 376 aa17.32■□□□□ 0.36
CHMP1A-201ENST00000397901 DHX36Q9H2U1 1008 aaKnown RBP17.32■□□□□ 0.36
CHMP1A-201ENST00000397901 SWAP70Q9UH65 585 aa17.32■□□□□ 0.36
CHMP1A-201ENST00000397901 NFS1Q9Y697 457 aa17.32■□□□□ 0.36
CHMP1A-201ENST00000397901 NRXN2Q9P2S2 1712 aa17.32■□□□□ 0.36
CHMP1A-201ENST00000397901 CES2O00748 559 aa17.31■□□□□ 0.36
CHMP1A-201ENST00000397901 PPEF1O14829 653 aaPredicted RBP17.31■□□□□ 0.36
CHMP1A-201ENST00000397901 CLTAP09496 248 aa17.31■□□□□ 0.36
CHMP1A-201ENST00000397901 SLURP2P0DP57 97 aa17.31■□□□□ 0.36
CHMP1A-201ENST00000397901 DRD4P21917 467 aa17.31■□□□□ 0.36
CHMP1A-201ENST00000397901 BLMHQ13867 455 aa17.31■□□□□ 0.36
CHMP1A-201ENST00000397901 IFI16Q16666 785 aaKnown RBP17.31■□□□□ 0.36
CHMP1A-201ENST00000397901 C10orf76Q5T2E6 689 aa17.31■□□□□ 0.36
CHMP1A-201ENST00000397901 AGBL2Q5U5Z8 902 aa17.31■□□□□ 0.36
CHMP1A-201ENST00000397901 SFR1Q86XK3 245 aa17.31■□□□□ 0.36
CHMP1A-201ENST00000397901 LRRC45Q96CN5 670 aa17.31■□□□□ 0.36
CHMP1A-201ENST00000397901 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.31■□□□□ 0.361e-7■■□□□ 12.2
CHMP1A-201ENST00000397901 IRAK4Q9NWZ3 460 aa17.31■□□□□ 0.36
CHMP1A-201ENST00000397901 SLC12A4Q9UP95 1085 aa17.31■□□□□ 0.36
CHMP1A-201ENST00000397901 DAGLAQ9Y4D2 1042 aa17.31■□□□□ 0.36
CHMP1A-201ENST00000397901 BACH1O14867 736 aa17.31■□□□□ 0.36
CHMP1A-201ENST00000397901 ZBTB5O15062 677 aa17.31■□□□□ 0.36
CHMP1A-201ENST00000397901 ODF2Q5BJF6 829 aa17.31■□□□□ 0.36
CHMP1A-201ENST00000397901 PPP4R3CPQ6ZMV5 832 aa17.31■□□□□ 0.36
CHMP1A-201ENST00000397901 SLF2Q8IX21 1173 aa17.31■□□□□ 0.36
CHMP1A-201ENST00000397901 CCDC197Q8NCU1 140 aa17.31■□□□□ 0.36
CHMP1A-201ENST00000397901 CNKSR1Q969H4 720 aa17.31■□□□□ 0.36
CHMP1A-201ENST00000397901 CELF4Q9BZC1 486 aaKnown RBP17.31■□□□□ 0.36
CHMP1A-201ENST00000397901 YIPF3Q9GZM5 350 aa17.31■□□□□ 0.36
CHMP1A-201ENST00000397901 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.31■□□□□ 0.36
CHMP1A-201ENST00000397901 L3MBTL1Q9Y468 752 aa17.31■□□□□ 0.36
CHMP1A-201ENST00000397901 PLIN4Q96Q06 1357 aa17.31■□□□□ 0.36
CHMP1A-201ENST00000397901 IGKV6D-41A0A0C4DH26 115 aa17.3■□□□□ 0.36
CHMP1A-201ENST00000397901 FLOT1O75955 427 aa17.3■□□□□ 0.36
CHMP1A-201ENST00000397901 NEFHP12036 1026 aa17.3■□□□□ 0.36
CHMP1A-201ENST00000397901 XRCC5P13010 732 aaKnown RBP17.3■□□□□ 0.36
CHMP1A-201ENST00000397901 HOXD13P35453 343 aa17.3■□□□□ 0.36
CHMP1A-201ENST00000397901 GABPAQ06546 454 aa17.3■□□□□ 0.36
CHMP1A-201ENST00000397901 ZC3H12AQ5D1E8 599 aaKnown RBP17.3■□□□□ 0.36
CHMP1A-201ENST00000397901 THEMIS2Q5TEJ8 643 aa17.3■□□□□ 0.36
CHMP1A-201ENST00000397901 PNMA8AQ86V59 439 aaPredicted RBP17.3■□□□□ 0.36
CHMP1A-201ENST00000397901 ANKS4BQ8N8V4 417 aa17.3■□□□□ 0.36
CHMP1A-201ENST00000397901 EIF1ADQ8N9N8 165 aaKnown RBP17.3■□□□□ 0.36
CHMP1A-201ENST00000397901 DPH5Q9H2P9 285 aa17.3■□□□□ 0.36
CHMP1A-201ENST00000397901 BCAS3Q9H6U6 928 aa17.3■□□□□ 0.36
CHMP1A-201ENST00000397901 SLC5A4Q9NY91 659 aa17.3■□□□□ 0.36
CHMP1A-201ENST00000397901 TTI1O43156 1089 aa17.3■□□□□ 0.36
CHMP1A-201ENST00000397901 AKAP3O75969 853 aa17.3■□□□□ 0.36
CHMP1A-201ENST00000397901 LUC7L3O95232 432 aaKnown RBP17.3■□□□□ 0.36
CHMP1A-201ENST00000397901 ALADP13716 330 aa17.3■□□□□ 0.36
CHMP1A-201ENST00000397901 ZNF268Q14587 947 aaPredicted RBP17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms