RNA–Protein interactions for RNA: ENST00000397728.7

LSS-202, Transcript of lanosterol synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSS, Length 4,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-202ENST00000397728 TRIM11Q96F44 468 aa16.63■□□□□ 0.25
LSS-202ENST00000397728 HAUS4Q9H6D7 363 aa16.63■□□□□ 0.25
LSS-202ENST00000397728 RHBDL3P58872 404 aa16.63■□□□□ 0.25
LSS-202ENST00000397728 TAB3Q8N5C8 712 aaPredicted RBP16.63■□□□□ 0.25
LSS-202ENST00000397728 ACAP3Q96P50 834 aa16.63■□□□□ 0.25
LSS-202ENST00000397728 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.63■□□□□ 0.253e-7■■■■■ 46.4
LSS-202ENST00000397728 TAL1P17542 331 aaPredicted RBP16.63■□□□□ 0.25
LSS-202ENST00000397728 VAMP7P51809 220 aa16.63■□□□□ 0.25
LSS-202ENST00000397728 HPS3Q969F9 1004 aa16.63■□□□□ 0.25
LSS-202ENST00000397728 STMN4Q9H169 189 aaPredicted RBP16.63■□□□□ 0.25
LSS-202ENST00000397728 GAKO14976 1311 aa16.63■□□□□ 0.25
LSS-202ENST00000397728 CTDNEP1O95476 244 aa16.63■□□□□ 0.25
LSS-202ENST00000397728 LLGL1Q15334 1064 aa16.63■□□□□ 0.25
LSS-202ENST00000397728 NAALADL2Q58DX5 795 aa16.63■□□□□ 0.25
LSS-202ENST00000397728 PROM2Q8N271 834 aa16.63■□□□□ 0.25
LSS-202ENST00000397728 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.63■□□□□ 0.25
LSS-202ENST00000397728 MRIQ9BWK5 157 aa16.63■□□□□ 0.25
LSS-202ENST00000397728 FAM217BQ9NTX9 383 aaPredicted RBP16.63■□□□□ 0.25
LSS-202ENST00000397728 PIK3C2AO00443 1686 aa16.62■□□□□ 0.25
LSS-202ENST00000397728 VWA5AO00534 786 aa16.62■□□□□ 0.25
LSS-202ENST00000397728 LMBRD2Q68DH5 695 aaPredicted RBP16.62■□□□□ 0.25
LSS-202ENST00000397728 GUF1Q8N442 669 aaKnown RBP16.62■□□□□ 0.25
LSS-202ENST00000397728 IL17RBQ9NRM6 502 aa16.62■□□□□ 0.25
LSS-202ENST00000397728 SAR1BQ9Y6B6 198 aa16.62■□□□□ 0.25
LSS-202ENST00000397728 IFT172Q9UG01 1749 aa16.62■□□□□ 0.25
LSS-202ENST00000397728 TMEM270Q6UE05 265 aa16.62■□□□□ 0.25
LSS-202ENST00000397728 RASGRP2Q7LDG7 609 aa16.62■□□□□ 0.25
LSS-202ENST00000397728 ARRDC4Q8NCT1 418 aa16.62■□□□□ 0.25
LSS-202ENST00000397728 SELENOSQ9BQE4 189 aa16.62■□□□□ 0.25
LSS-202ENST00000397728 TRIM9Q9C026 710 aa16.62■□□□□ 0.25
LSS-202ENST00000397728 DNAJC12Q9UKB3 198 aa16.62■□□□□ 0.25
LSS-202ENST00000397728 TRIM49P0CI25 452 aa16.62■□□□□ 0.25
LSS-202ENST00000397728 TRIM49CP0CI26 452 aa16.62■□□□□ 0.25
LSS-202ENST00000397728 EHHADHQ08426 723 aa16.62■□□□□ 0.25
LSS-202ENST00000397728 KCNH2Q12809 1159 aa16.62■□□□□ 0.25
LSS-202ENST00000397728 GAS2L3Q86XJ1 694 aa16.62■□□□□ 0.25
LSS-202ENST00000397728 GPD1LQ8N335 351 aa16.62■□□□□ 0.25
LSS-202ENST00000397728 HAUS1Q96CS2 278 aa16.62■□□□□ 0.25
LSS-202ENST00000397728 PIDD1Q9HB75 910 aa16.62■□□□□ 0.25
LSS-202ENST00000397728 PPP2R2CQ9Y2T4 447 aa16.62■□□□□ 0.25
LSS-202ENST00000397728 BCL9LQ86UU0 1499 aa16.61■□□□□ 0.25
LSS-202ENST00000397728 MSH4O15457 936 aa16.61■□□□□ 0.25
LSS-202ENST00000397728 CPB1P15086 417 aa16.61■□□□□ 0.25
LSS-202ENST00000397728 ZBED6P86452 979 aa16.61■□□□□ 0.25
LSS-202ENST00000397728 CLUL1Q15846 466 aa16.61■□□□□ 0.25
LSS-202ENST00000397728 CEP63Q96MT8 703 aa16.61■□□□□ 0.25
LSS-202ENST00000397728 KCNK9Q9NPC2 374 aa16.61■□□□□ 0.25
LSS-202ENST00000397728 RRN3P2A6NIE6 340 aa16.61■□□□□ 0.25
LSS-202ENST00000397728 SLURP2P0DP57 97 aa16.61■□□□□ 0.25
LSS-202ENST00000397728 ZNF18P17022 549 aa16.61■□□□□ 0.25
LSS-202ENST00000397728 DUOXA2Q1HG44 320 aa16.61■□□□□ 0.25
LSS-202ENST00000397728 ERICH1Q86X53 443 aa16.61■□□□□ 0.25
LSS-202ENST00000397728 GSDMBQ8TAX9 411 aa16.61■□□□□ 0.25
LSS-202ENST00000397728 REEP2Q9BRK0 252 aa16.61■□□□□ 0.25
LSS-202ENST00000397728 MRC1P22897 1456 aa16.61■□□□□ 0.25
LSS-202ENST00000397728 H7C0C1 242 aa16.61■□□□□ 0.25
LSS-202ENST00000397728 ATP5OP48047 213 aa16.61■□□□□ 0.25
LSS-202ENST00000397728 NLRP11P59045 1033 aaKnown RBP16.61■□□□□ 0.25
LSS-202ENST00000397728 RGMBQ6NW40 437 aa16.61■□□□□ 0.25
LSS-202ENST00000397728 RYBPQ8N488 228 aaPredicted RBP16.61■□□□□ 0.25
LSS-202ENST00000397728 SYTL5Q8TDW5 730 aaPredicted RBP16.61■□□□□ 0.25
LSS-202ENST00000397728 MRPL47Q9HD33 250 aaKnown RBP16.61■□□□□ 0.25
LSS-202ENST00000397728 CPSF3Q9UKF6 684 aaKnown RBP16.61■□□□□ 0.25
LSS-202ENST00000397728 OPA1O60313 960 aa16.6■□□□□ 0.25
LSS-202ENST00000397728 RFC5P40937 340 aa16.6■□□□□ 0.25
LSS-202ENST00000397728 ACOT2P49753 483 aa16.6■□□□□ 0.25
LSS-202ENST00000397728 NAA35Q5VZE5 725 aa16.6■□□□□ 0.25
LSS-202ENST00000397728 USP49Q70CQ1 688 aa16.6■□□□□ 0.25
LSS-202ENST00000397728 ZC3H15Q8WU90 426 aaKnown RBP16.6■□□□□ 0.25
LSS-202ENST00000397728 KIF9Q9HAQ2 790 aa16.6■□□□□ 0.25
LSS-202ENST00000397728 ODF2LQ9ULJ1 636 aa16.6■□□□□ 0.25
LSS-202ENST00000397728 SPDYE16A6NNV3 312 aaPredicted RBP16.6■□□□□ 0.25
LSS-202ENST00000397728 THPOP40225 353 aa16.6■□□□□ 0.25
LSS-202ENST00000397728 IFT122Q9HBG6 1241 aa16.6■□□□□ 0.25
LSS-202ENST00000397728 ZNF148Q9UQR1 794 aa16.6■□□□□ 0.25
LSS-202ENST00000397728 DCDC2CA8MYV0 355 aa16.6■□□□□ 0.25
LSS-202ENST00000397728 KRIT1O00522 736 aa16.6■□□□□ 0.25
LSS-202ENST00000397728 STRNO43815 780 aa16.6■□□□□ 0.25
LSS-202ENST00000397728 PDCD2LQ9BRP1 358 aa16.6■□□□□ 0.25
LSS-202ENST00000397728 NGRNQ9NPE2 291 aaKnown RBP16.6■□□□□ 0.25
LSS-202ENST00000397728 ADAMTS1Q9UHI8 967 aa16.6■□□□□ 0.25
LSS-202ENST00000397728 SALL3Q9BXA9 1300 aa16.6■□□□□ 0.25
LSS-202ENST00000397728 STK25O00506 426 aa16.6■□□□□ 0.25
LSS-202ENST00000397728 STAMBPO95630 424 aa16.6■□□□□ 0.25
LSS-202ENST00000397728 TUBBP07437 444 aa16.6■□□□□ 0.25
LSS-202ENST00000397728 ARP10275 920 aa16.6■□□□□ 0.25
LSS-202ENST00000397728 RPA1P27694 616 aa16.6■□□□□ 0.25
LSS-202ENST00000397728 TUBB2AQ13885 445 aa16.6■□□□□ 0.25
LSS-202ENST00000397728 KRT39Q6A163 491 aa16.6■□□□□ 0.25
LSS-202ENST00000397728 TUBB2BQ9BVA1 445 aa16.6■□□□□ 0.25
LSS-202ENST00000397728 TIPINQ9BVW5 301 aa16.6■□□□□ 0.25
LSS-202ENST00000397728 NRBP1Q9UHY1 535 aa16.6■□□□□ 0.25
LSS-202ENST00000397728 ZDHHC9Q9Y397 364 aa16.6■□□□□ 0.25
LSS-202ENST00000397728 XPAP23025 273 aaPredicted RBP16.59■□□□□ 0.25
LSS-202ENST00000397728 EIF4A3P38919 411 aaKnown RBP16.59■□□□□ 0.25
LSS-202ENST00000397728 C4orf50Q6ZRC1 276 aa16.59■□□□□ 0.25
LSS-202ENST00000397728 CEP128Q6ZU80 1094 aa16.59■□□□□ 0.25
LSS-202ENST00000397728 LRRC8AQ8IWT6 810 aa16.59■□□□□ 0.25
LSS-202ENST00000397728 CALN1Q9BXU9 219 aa16.59■□□□□ 0.25
LSS-202ENST00000397728 C17orf102A2RUQ5 167 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms