RNA–Protein interactions for RNA: ENST00000397644.2

LINC00887-201, long intergenic non-protein coding RNA 887, humanhuman

TSL 5

Gene LINC00887, Length 416 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00887-201ENST00000397644 ERCC4Q92889 916 aaPredicted RBP8.47□□□□□ -1.05
LINC00887-201ENST00000397644 SMARCE1Q969G3 411 aa8.47□□□□□ -1.05
LINC00887-201ENST00000397644 CCDC47Q96A33 483 aaKnown RBP8.47□□□□□ -1.05
LINC00887-201ENST00000397644 LENG1Q96BZ8 264 aaPredicted RBP8.47□□□□□ -1.05
LINC00887-201ENST00000397644 CEP170P1Q96L14 293 aa8.47□□□□□ -1.05
LINC00887-201ENST00000397644 C7orf25Q9BPX7 421 aa8.47□□□□□ -1.05
LINC00887-201ENST00000397644 NIFKQ9BYG3 293 aaKnown RBP8.47□□□□□ -1.05
LINC00887-201ENST00000397644 BLZF1Q9H2G9 400 aa8.47□□□□□ -1.05
LINC00887-201ENST00000397644 RNPEPQ9H4A4 650 aa8.47□□□□□ -1.05
LINC00887-201ENST00000397644 ZHX3Q9H4I2 956 aa8.47□□□□□ -1.05
LINC00887-201ENST00000397644 TUT1Q9H6E5 874 aaKnown RBP8.47□□□□□ -1.05
LINC00887-201ENST00000397644 IL21Q9HBE4 155 aa8.47□□□□□ -1.05
LINC00887-201ENST00000397644 XPNPEP3Q9NQH7 507 aa8.47□□□□□ -1.05
LINC00887-201ENST00000397644 ERAP1Q9NZ08 941 aa8.47□□□□□ -1.05
LINC00887-201ENST00000397644 DDX20Q9UHI6 824 aaKnown RBP8.47□□□□□ -1.05
LINC00887-201ENST00000397644 PCDHA5Q9Y5H7 936 aa8.47□□□□□ -1.05
LINC00887-201ENST00000397644 MYH15Q9Y2K3 1946 aa8.46□□□□□ -1.05
LINC00887-201ENST00000397644 CEP290O15078 2479 aa8.46□□□□□ -1.05
LINC00887-201ENST00000397644 NPHP3-ACAD11A0A0J9YXS1 232 aa8.46□□□□□ -1.06
LINC00887-201ENST00000397644 HBP1O60381 514 aa8.46□□□□□ -1.06
LINC00887-201ENST00000397644 MSCO60682 206 aa8.46□□□□□ -1.06
LINC00887-201ENST00000397644 STBD1O95210 358 aa8.46□□□□□ -1.06
LINC00887-201ENST00000397644 LGALS2P05162 132 aa8.46□□□□□ -1.06
LINC00887-201ENST00000397644 MYL1P05976 194 aa8.46□□□□□ -1.06
LINC00887-201ENST00000397644 CCL5P13501 91 aa8.46□□□□□ -1.06
LINC00887-201ENST00000397644 IDEP14735 1019 aa8.46□□□□□ -1.06
LINC00887-201ENST00000397644 CYP11B2P19099 503 aa8.46□□□□□ -1.06
LINC00887-201ENST00000397644 DNAJB2P25686 324 aa8.46□□□□□ -1.06
LINC00887-201ENST00000397644 CASP1P29466 404 aa8.46□□□□□ -1.06
LINC00887-201ENST00000397644 SLC12A3P55017 1021 aa8.46□□□□□ -1.06
LINC00887-201ENST00000397644 ASIC1P78348 528 aa8.46□□□□□ -1.06
LINC00887-201ENST00000397644 PRKCEQ02156 737 aa8.46□□□□□ -1.06
LINC00887-201ENST00000397644 RAD51AP2Q09MP3 1159 aa8.46□□□□□ -1.06
LINC00887-201ENST00000397644 PLCB4Q15147 1175 aa8.46□□□□□ -1.06
LINC00887-201ENST00000397644 KCNA10Q16322 511 aa8.46□□□□□ -1.06
LINC00887-201ENST00000397644 ZSCAN23Q3MJ62 389 aa8.46□□□□□ -1.06
LINC00887-201ENST00000397644 MTERF2Q49AM1 385 aa8.46□□□□□ -1.06
LINC00887-201ENST00000397644 ARSHQ5FYA8 562 aa8.46□□□□□ -1.06
LINC00887-201ENST00000397644 RINT1Q6NUQ1 792 aa8.46□□□□□ -1.06
LINC00887-201ENST00000397644 ANO5Q75V66 913 aa8.46□□□□□ -1.06
LINC00887-201ENST00000397644 MAEAQ7L5Y9 396 aa8.46□□□□□ -1.06
LINC00887-201ENST00000397644 RNF180Q86T96 592 aa8.46□□□□□ -1.06
LINC00887-201ENST00000397644 EXOC8Q8IYI6 725 aa8.46□□□□□ -1.06
LINC00887-201ENST00000397644 PCSK9Q8NBP7 692 aaKnown RBP8.46□□□□□ -1.06
LINC00887-201ENST00000397644 ARRDC4Q8NCT1 418 aa8.46□□□□□ -1.06
LINC00887-201ENST00000397644 FAM167AQ96KS9 214 aa8.46□□□□□ -1.06
LINC00887-201ENST00000397644 SH2D3AQ9BRG2 576 aa8.46□□□□□ -1.06
LINC00887-201ENST00000397644 C16orf70Q9BSU1 422 aa8.46□□□□□ -1.06
LINC00887-201ENST00000397644 RNF208Q9H0X6 261 aa8.46□□□□□ -1.06
LINC00887-201ENST00000397644 POLD4Q9HCU8 107 aa8.46□□□□□ -1.06
LINC00887-201ENST00000397644 CYP26B1Q9NR63 512 aa8.46□□□□□ -1.06
LINC00887-201ENST00000397644 ZNF215Q9UL58 517 aaPredicted RBP8.46□□□□□ -1.06
LINC00887-201ENST00000397644 PVALEFA0A1B0GWK0 134 aa8.45□□□□□ -1.06
LINC00887-201ENST00000397644 SYCE3A1L190 88 aa8.45□□□□□ -1.06
LINC00887-201ENST00000397644 TMEM150BA6NC51 233 aa8.45□□□□□ -1.06
LINC00887-201ENST00000397644 RCCD1A6NED2 376 aa8.45□□□□□ -1.06
LINC00887-201ENST00000397644 SFI1A8K8P3 1242 aa8.45□□□□□ -1.06
LINC00887-201ENST00000397644 BIN1O00499 593 aa8.45□□□□□ -1.06
LINC00887-201ENST00000397644 TFRCP02786 760 aaKnown RBP8.45□□□□□ -1.06
LINC00887-201ENST00000397644 RPN1P04843 607 aaKnown RBP8.45□□□□□ -1.06
LINC00887-201ENST00000397644 INSRRP14616 1297 aa8.45□□□□□ -1.06
LINC00887-201ENST00000397644 SARSP49591 514 aaKnown RBP8.45□□□□□ -1.06
LINC00887-201ENST00000397644 RARRES1P49788 294 aa8.45□□□□□ -1.06
LINC00887-201ENST00000397644 IGBP1P78318 339 aa8.45□□□□□ -1.06
LINC00887-201ENST00000397644 DPYDQ12882 1025 aa8.45□□□□□ -1.06
LINC00887-201ENST00000397644 GIT2Q14161 759 aa8.45□□□□□ -1.06
LINC00887-201ENST00000397644 HERC4Q5GLZ8 1057 aaPredicted RBP8.45□□□□□ -1.06
LINC00887-201ENST00000397644 ZNF484Q5JVG2 852 aa8.45□□□□□ -1.06
LINC00887-201ENST00000397644 PLA2G4FQ68DD2 849 aa8.45□□□□□ -1.06
LINC00887-201ENST00000397644 C1orf186Q6ZWK4 172 aa8.45□□□□□ -1.06
LINC00887-201ENST00000397644 TRIM50Q86XT4 487 aa8.45□□□□□ -1.06
LINC00887-201ENST00000397644 CCDC65Q8IXS2 484 aa8.45□□□□□ -1.06
LINC00887-201ENST00000397644 ATP8B4Q8TF62 1192 aa8.45□□□□□ -1.06
LINC00887-201ENST00000397644 GSDMAQ96QA5 445 aa8.45□□□□□ -1.06
LINC00887-201ENST00000397644 MTG1Q9BT17 334 aaPredicted RBP8.45□□□□□ -1.06
LINC00887-201ENST00000397644 TRIM9Q9C026 710 aa8.45□□□□□ -1.06
LINC00887-201ENST00000397644 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.45□□□□□ -1.06
LINC00887-201ENST00000397644 UNC93B1Q9H1C4 597 aa8.45□□□□□ -1.06
LINC00887-201ENST00000397644 UPF3AQ9H1J1 476 aaKnown RBP8.45□□□□□ -1.06
LINC00887-201ENST00000397644 TMEM134Q9H6X4 195 aa8.45□□□□□ -1.06
LINC00887-201ENST00000397644 SUGCTQ9HAC7 445 aa8.45□□□□□ -1.06
LINC00887-201ENST00000397644 PANK4Q9NVE7 773 aa8.45□□□□□ -1.06
LINC00887-201ENST00000397644 RMND1Q9NWS8 449 aa8.45□□□□□ -1.06
LINC00887-201ENST00000397644 KCND2Q9NZV8 630 aa8.45□□□□□ -1.06
LINC00887-201ENST00000397644 EMSYQ7Z589 1322 aa8.45□□□□□ -1.06
LINC00887-201ENST00000397644 MYADML2A6NDP7 307 aa8.44□□□□□ -1.06
LINC00887-201ENST00000397644 RRN3P2A6NIE6 340 aa8.44□□□□□ -1.06
LINC00887-201ENST00000397644 USO1O60763 962 aaKnown RBP8.44□□□□□ -1.06
LINC00887-201ENST00000397644 DGAT1O75907 488 aa8.44□□□□□ -1.06
LINC00887-201ENST00000397644 FAM13AO94988 1023 aa8.44□□□□□ -1.06
LINC00887-201ENST00000397644 ASGR1P07306 291 aa8.44□□□□□ -1.06
LINC00887-201ENST00000397644 ZNF286BP0CG31 522 aa8.44□□□□□ -1.06
LINC00887-201ENST00000397644 HOXD8P13378 290 aaPredicted RBP8.44□□□□□ -1.06
LINC00887-201ENST00000397644 KLRC1P26715 233 aa8.44□□□□□ -1.06
LINC00887-201ENST00000397644 DNM2P50570 870 aa8.44□□□□□ -1.06
LINC00887-201ENST00000397644 POLGP54098 1239 aaPredicted RBP8.44□□□□□ -1.06
LINC00887-201ENST00000397644 NLRP12P59046 1061 aa8.44□□□□□ -1.06
LINC00887-201ENST00000397644 COPS2P61201 443 aa8.44□□□□□ -1.06
LINC00887-201ENST00000397644 TBC1D8BQ0IIM8 1120 aa8.44□□□□□ -1.06
LINC00887-201ENST00000397644 PSMD2Q13200 908 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms