RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 CYP2D7A0A087X1C5 515 aa5.88□□□□□ -1.47
PTPRD-205ENST00000397611 ARHGAP42A6NI28 874 aa5.88□□□□□ -1.47
PTPRD-205ENST00000397611 PODXLO00592 558 aa5.88□□□□□ -1.47
PTPRD-205ENST00000397611 BACH1O14867 736 aa5.88□□□□□ -1.47
PTPRD-205ENST00000397611 LYPLA2O95372 231 aa5.88□□□□□ -1.47
PTPRD-205ENST00000397611 KLRC1P26715 233 aa5.88□□□□□ -1.47
PTPRD-205ENST00000397611 ABCD1P33897 745 aa5.88□□□□□ -1.47
PTPRD-205ENST00000397611 STAT1P42224 750 aa5.88□□□□□ -1.47
PTPRD-205ENST00000397611 POU5F1Q01860 360 aaKnown RBP5.88□□□□□ -1.47
PTPRD-205ENST00000397611 DHX9Q08211 1270 aaKnown RBP5.88□□□□□ -1.47
PTPRD-205ENST00000397611 PLS1Q14651 629 aa5.88□□□□□ -1.47
PTPRD-205ENST00000397611 ELAC2Q9BQ52 826 aaKnown RBP5.88□□□□□ -1.47
PTPRD-205ENST00000397611 IDI2Q9BXS1 227 aa5.88□□□□□ -1.47
PTPRD-205ENST00000397611 KCTD10Q9H3F6 313 aa5.88□□□□□ -1.47
PTPRD-205ENST00000397611 G3BP2Q9UN86 482 aaKnown RBP5.88□□□□□ -1.47
PTPRD-205ENST00000397611 A0A087X0T9 212 aa5.88□□□□□ -1.47
PTPRD-205ENST00000397611 ESYT3A0FGR9 886 aa5.88□□□□□ -1.47
PTPRD-205ENST00000397611 NDC80O14777 642 aa5.88□□□□□ -1.47
PTPRD-205ENST00000397611 FAM228BP0C875 321 aa5.88□□□□□ -1.47
PTPRD-205ENST00000397611 MAPTP10636 758 aaKnown RBP5.88□□□□□ -1.47
PTPRD-205ENST00000397611 TNFAIP3P21580 790 aa5.88□□□□□ -1.47
PTPRD-205ENST00000397611 SH3BGRP55822 239 aaPredicted RBP5.88□□□□□ -1.47
PTPRD-205ENST00000397611 ANKRD20A3Q5VUR7 823 aa5.88□□□□□ -1.47
PTPRD-205ENST00000397611 CC2D2BQ6DHV5 1058 aa5.88□□□□□ -1.47
PTPRD-205ENST00000397611 C11orf63Q6NUN7 778 aa5.88□□□□□ -1.47
PTPRD-205ENST00000397611 USP37Q86T82 979 aa5.88□□□□□ -1.47
PTPRD-205ENST00000397611 NELFCDQ8IXH7 590 aa5.88□□□□□ -1.47
PTPRD-205ENST00000397611 EEF2KMTQ96G04 330 aa5.88□□□□□ -1.47
PTPRD-205ENST00000397611 KIF9Q9HAQ2 790 aa5.88□□□□□ -1.47
PTPRD-205ENST00000397611 ATP8A1Q9Y2Q0 1164 aa5.88□□□□□ -1.47
PTPRD-205ENST00000397611 NHSL1Q5SYE7 1610 aa5.88□□□□□ -1.47
PTPRD-205ENST00000397611 PIK3CDO00329 1044 aa5.88□□□□□ -1.47
PTPRD-205ENST00000397611 BCRP11274 1271 aa5.88□□□□□ -1.47
PTPRD-205ENST00000397611 UCHL3P15374 230 aa5.88□□□□□ -1.47
PTPRD-205ENST00000397611 LSP1P33241 339 aa5.88□□□□□ -1.47
PTPRD-205ENST00000397611 ERFEQ4G0M1 354 aa5.88□□□□□ -1.47
PTPRD-205ENST00000397611 FAM47AQ5JRC9 791 aa5.88□□□□□ -1.47
PTPRD-205ENST00000397611 EPM2AIP1Q7L775 607 aaPredicted RBP5.88□□□□□ -1.47
PTPRD-205ENST00000397611 GDAP1Q8TB36 358 aa5.88□□□□□ -1.47
PTPRD-205ENST00000397611 MYCBPAPQ8TBZ2 947 aa5.88□□□□□ -1.47
PTPRD-205ENST00000397611 MAIP1Q8WWC4 291 aa5.88□□□□□ -1.47
PTPRD-205ENST00000397611 WDR11Q9BZH6 1224 aa5.88□□□□□ -1.47
PTPRD-205ENST00000397611 ADAMTS1Q9UHI8 967 aa5.88□□□□□ -1.47
PTPRD-205ENST00000397611 SNED1Q8TER0 1413 aa5.88□□□□□ -1.47
PTPRD-205ENST00000397611 MTA2O94776 668 aa5.88□□□□□ -1.47
PTPRD-205ENST00000397611 DESP17661 470 aa5.88□□□□□ -1.47
PTPRD-205ENST00000397611 MDH1P40925 334 aaKnown RBP5.88□□□□□ -1.47
PTPRD-205ENST00000397611 COASYQ13057 564 aa5.88□□□□□ -1.47
PTPRD-205ENST00000397611 ADAM9Q13443 819 aa5.88□□□□□ -1.47
PTPRD-205ENST00000397611 VPS72Q15906 364 aa5.88□□□□□ -1.47
PTPRD-205ENST00000397611 C6orf89Q6UWU4 347 aa5.88□□□□□ -1.47
PTPRD-205ENST00000397611 U2AF1L4Q8WU68 220 aaKnown RBP5.88□□□□□ -1.47
PTPRD-205ENST00000397611 GPKOWQ92917 476 aaPredicted RBP eCLIP5.88□□□□□ -1.473e-12■■■■■ 70.5
PTPRD-205ENST00000397611 TBC1D7Q9P0N9 293 aa5.88□□□□□ -1.47
PTPRD-205ENST00000397611 PPP1R1BQ9UD71 204 aaPredicted RBP5.88□□□□□ -1.47
PTPRD-205ENST00000397611 UBAP1LF5GYI3 381 aa5.88□□□□□ -1.47
PTPRD-205ENST00000397611 PTGISQ16647 500 aa5.88□□□□□ -1.47
PTPRD-205ENST00000397611 MFSD5Q6N075 450 aa5.88□□□□□ -1.47
PTPRD-205ENST00000397611 PODNQ7Z5L7 613 aa5.88□□□□□ -1.47
PTPRD-205ENST00000397611 UBL4BQ8N7F7 174 aa5.88□□□□□ -1.47
PTPRD-205ENST00000397611 HES6Q96HZ4 224 aa5.88□□□□□ -1.47
PTPRD-205ENST00000397611 GMCL1Q96IK5 515 aa5.88□□□□□ -1.47
PTPRD-205ENST00000397611 LARSQ9P2J5 1176 aaKnown RBP5.88□□□□□ -1.47
PTPRD-205ENST00000397611 ATF5Q9Y2D1 282 aaPredicted RBP5.88□□□□□ -1.47
PTPRD-205ENST00000397611 NCANO14594 1321 aa5.88□□□□□ -1.47
PTPRD-205ENST00000397611 SYNGAP1Q96PV0 1343 aa5.88□□□□□ -1.47
PTPRD-205ENST00000397611 EYA4O95677 639 aa5.88□□□□□ -1.47
PTPRD-205ENST00000397611 AFPP02771 609 aaKnown RBP5.88□□□□□ -1.47
PTPRD-205ENST00000397611 USP17L8P0C7I0 530 aa5.88□□□□□ -1.47
PTPRD-205ENST00000397611 SLC1A4P43007 532 aa5.88□□□□□ -1.47
PTPRD-205ENST00000397611 PSMC4P43686 418 aa5.88□□□□□ -1.47
PTPRD-205ENST00000397611 GHRHRQ02643 423 aa5.88□□□□□ -1.47
PTPRD-205ENST00000397611 EXOC3L4Q17RC7 722 aa5.88□□□□□ -1.47
PTPRD-205ENST00000397611 ZNF449Q6P9G9 518 aa5.88□□□□□ -1.47
PTPRD-205ENST00000397611 CAPN12Q6ZSI9 719 aa5.88□□□□□ -1.47
PTPRD-205ENST00000397611 CNBD1Q8NA66 436 aa5.88□□□□□ -1.47
PTPRD-205ENST00000397611 ZNF473Q8WTR7 871 aaKnown RBP5.88□□□□□ -1.47
PTPRD-205ENST00000397611 ZBTB10Q96DT7 871 aa5.88□□□□□ -1.47
PTPRD-205ENST00000397611 ROPN1BQ9BZX4 212 aaPredicted RBP5.88□□□□□ -1.47
PTPRD-205ENST00000397611 ROPN1Q9HAT0 212 aaPredicted RBP5.88□□□□□ -1.47
PTPRD-205ENST00000397611 PPFIA2O75334 1257 aa5.88□□□□□ -1.47
PTPRD-205ENST00000397611 MYBL2P10244 700 aa5.88□□□□□ -1.47
PTPRD-205ENST00000397611 PAX7P23759 505 aa5.88□□□□□ -1.47
PTPRD-205ENST00000397611 CHRNA3P32297 505 aa5.88□□□□□ -1.47
PTPRD-205ENST00000397611 HSPA1LP34931 641 aa5.88□□□□□ -1.47
PTPRD-205ENST00000397611 TXKP42681 527 aa5.88□□□□□ -1.47
PTPRD-205ENST00000397611 MKRN3Q13064 507 aaKnown RBP5.88□□□□□ -1.47
PTPRD-205ENST00000397611 KNOP1Q1ED39 458 aaKnown RBP5.88□□□□□ -1.47
PTPRD-205ENST00000397611 SH2D3CQ8N5H7 860 aa5.88□□□□□ -1.47
PTPRD-205ENST00000397611 SLC40A1Q9NP59 571 aa5.88□□□□□ -1.47
PTPRD-205ENST00000397611 DNM3Q9UQ16 869 aa5.88□□□□□ -1.47
PTPRD-205ENST00000397611 CALUO43852 315 aaPredicted RBP5.87□□□□□ -1.47
PTPRD-205ENST00000397611 TROVE2P10155 538 aaKnown RBP eCLIP5.87□□□□□ -1.47
PTPRD-205ENST00000397611 NR2F2P24468 414 aa5.87□□□□□ -1.47
PTPRD-205ENST00000397611 TNNI2P48788 182 aa5.87□□□□□ -1.47
PTPRD-205ENST00000397611 RASA2Q15283 850 aa5.87□□□□□ -1.47
PTPRD-205ENST00000397611 LACTB2Q53H82 288 aaPredicted RBP5.87□□□□□ -1.47
PTPRD-205ENST00000397611 RBM26Q5T8P6 1007 aaKnown RBP5.87□□□□□ -1.47
PTPRD-205ENST00000397611 SCFD1Q8WVM8 642 aa5.87□□□□□ -1.47
PTPRD-205ENST00000397611 STK33Q9BYT3 514 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms