RNA–Protein interactions for RNA: ENST00000397396.5

TSPAN4-202, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-202ENST00000397396 ISM2Q6H9L7 571 aa26.05■■□□□ 1.76
TSPAN4-202ENST00000397396 MAEAQ7L5Y9 396 aa26.05■■□□□ 1.76
TSPAN4-202ENST00000397396 FAM178BQ8IXR5 827 aa26.05■■□□□ 1.76
TSPAN4-202ENST00000397396 DAW1Q8N136 415 aa26.05■■□□□ 1.76
TSPAN4-202ENST00000397396 SEZ6LQ9BYH1 1024 aa26.05■■□□□ 1.76
TSPAN4-202ENST00000397396 POLR3FQ9H1D9 316 aaPredicted RBP26.05■■□□□ 1.76
TSPAN4-202ENST00000397396 C17orf102A2RUQ5 167 aa26.04■■□□□ 1.76
TSPAN4-202ENST00000397396 DNM1LO00429 736 aa26.04■■□□□ 1.76
TSPAN4-202ENST00000397396 ACLYP53396 1101 aa26.04■■□□□ 1.76
TSPAN4-202ENST00000397396 MXD4Q14582 209 aaPredicted RBP26.04■■□□□ 1.76
TSPAN4-202ENST00000397396 ANO6Q4KMQ2 910 aa26.04■■□□□ 1.76
TSPAN4-202ENST00000397396 MTHFD1LQ6UB35 978 aa26.04■■□□□ 1.76
TSPAN4-202ENST00000397396 SPIRE2Q8WWL2 714 aa26.04■■□□□ 1.76
TSPAN4-202ENST00000397396 PSPC1Q8WXF1 523 aaKnown RBP26.04■■□□□ 1.76
TSPAN4-202ENST00000397396 GLT1D1Q96MS3 346 aa26.04■■□□□ 1.76
TSPAN4-202ENST00000397396 MRPL44Q9H9J2 332 aaKnown RBP26.04■■□□□ 1.76
TSPAN4-202ENST00000397396 UBE4BO95155 1302 aa26.04■■□□□ 1.76
TSPAN4-202ENST00000397396 SCN10AQ9Y5Y9 1956 aa26.03■■□□□ 1.76
TSPAN4-202ENST00000397396 PSMA7O14818 248 aa26.03■■□□□ 1.76
TSPAN4-202ENST00000397396 ASAP2O43150 1006 aa26.03■■□□□ 1.76
TSPAN4-202ENST00000397396 BMP6P22004 513 aa26.03■■□□□ 1.76
TSPAN4-202ENST00000397396 KLRC1P26715 233 aa26.03■■□□□ 1.76
TSPAN4-202ENST00000397396 CHMP4BP1P59074 171 aa26.03■■□□□ 1.76
TSPAN4-202ENST00000397396 PTPN11Q06124 597 aaPredicted RBP26.03■■□□□ 1.76
TSPAN4-202ENST00000397396 MTFR1Q15390 333 aa26.03■■□□□ 1.76
TSPAN4-202ENST00000397396 NFRKBQ6P4R8 1299 aa26.03■■□□□ 1.76
TSPAN4-202ENST00000397396 SESTD1Q86VW0 696 aa26.03■■□□□ 1.76
TSPAN4-202ENST00000397396 LMBR1Q8WVP7 490 aa26.03■■□□□ 1.76
TSPAN4-202ENST00000397396 DEFB118Q96PH6 123 aa26.03■■□□□ 1.76
TSPAN4-202ENST00000397396 DNAJC25Q9H1X3 360 aa26.03■■□□□ 1.76
TSPAN4-202ENST00000397396 PHLPP2Q6ZVD8 1323 aa26.03■■□□□ 1.76
TSPAN4-202ENST00000397396 EIF3DO15371 548 aaKnown RBP eCLIP26.02■■□□□ 1.76
TSPAN4-202ENST00000397396 RPLP2P05387 115 aaKnown RBP26.02■■□□□ 1.76
TSPAN4-202ENST00000397396 ERCC5P28715 1186 aaPredicted RBP26.02■■□□□ 1.76
TSPAN4-202ENST00000397396 ARL2P36404 184 aa26.02■■□□□ 1.76
TSPAN4-202ENST00000397396 NAMPTP43490 491 aa26.02■■□□□ 1.76
TSPAN4-202ENST00000397396 STK4Q13043 487 aa26.02■■□□□ 1.76
TSPAN4-202ENST00000397396 EFCAB12Q6NXP0 572 aa26.02■■□□□ 1.76
TSPAN4-202ENST00000397396 GUF1Q8N442 669 aaKnown RBP26.02■■□□□ 1.76
TSPAN4-202ENST00000397396 TRAPPC12Q8WVT3 735 aa26.02■■□□□ 1.76
TSPAN4-202ENST00000397396 MAP7D2Q96T17 732 aa26.02■■□□□ 1.76
TSPAN4-202ENST00000397396 BPIFA3Q9BQP9 254 aa26.02■■□□□ 1.76
TSPAN4-202ENST00000397396 SUGCTQ9HAC7 445 aa26.02■■□□□ 1.76
TSPAN4-202ENST00000397396 SLC39A2Q9NP94 309 aa26.02■■□□□ 1.76
TSPAN4-202ENST00000397396 GPRC5CQ9NQ84 441 aa26.02■■□□□ 1.76
TSPAN4-202ENST00000397396 SETD4Q9NVD3 440 aa26.02■■□□□ 1.76
TSPAN4-202ENST00000397396 OGDHLQ9ULD0 1010 aa26.02■■□□□ 1.76
TSPAN4-202ENST00000397396 PHF24Q9UPV7 400 aa26.02■■□□□ 1.76
TSPAN4-202ENST00000397396 GDAQ9Y2T3 454 aa26.02■■□□□ 1.76
TSPAN4-202ENST00000397396 PCDHB13Q9Y5F0 798 aa26.02■■□□□ 1.76
TSPAN4-202ENST00000397396 PCDHA2Q9Y5H9 948 aa26.02■■□□□ 1.76
TSPAN4-202ENST00000397396 MBLAC1A4D2B0 266 aaPredicted RBP26.01■■□□□ 1.75
TSPAN4-202ENST00000397396 HOXC8P31273 242 aa26.01■■□□□ 1.75
TSPAN4-202ENST00000397396 CDC42EP1Q00587 391 aa26.01■■□□□ 1.75
TSPAN4-202ENST00000397396 TFDP1Q14186 410 aa26.01■■□□□ 1.75
TSPAN4-202ENST00000397396 NBPF20Q3BBV1 942 aa26.01■■□□□ 1.75
TSPAN4-202ENST00000397396 MYOCDQ8IZQ8 938 aa26.01■■□□□ 1.75
TSPAN4-202ENST00000397396 ADSSL1Q8N142 457 aa26.01■■□□□ 1.75
TSPAN4-202ENST00000397396 ZNF710Q8N1W2 664 aa26.01■■□□□ 1.75
TSPAN4-202ENST00000397396 METTL13Q8N6R0 699 aa26.01■■□□□ 1.75
TSPAN4-202ENST00000397396 KIAA0895Q8NCT3 520 aa26.01■■□□□ 1.75
TSPAN4-202ENST00000397396 FAM200AQ8TCP9 573 aa26.01■■□□□ 1.75
TSPAN4-202ENST00000397396 HVCN1Q96D96 273 aa26.01■■□□□ 1.75
TSPAN4-202ENST00000397396 DHTKD1Q96HY7 919 aaPredicted RBP26.01■■□□□ 1.75
TSPAN4-202ENST00000397396 ST6GALNAC4Q9H4F1 302 aa26.01■■□□□ 1.75
TSPAN4-202ENST00000397396 MYH11P35749 1972 aa26■■□□□ 1.75
TSPAN4-202ENST00000397396 SFI1A8K8P3 1242 aa26■■□□□ 1.75
TSPAN4-202ENST00000397396 K7ENM7 598 aa26■■□□□ 1.75
TSPAN4-202ENST00000397396 GCNT3O95395 438 aa26■■□□□ 1.75
TSPAN4-202ENST00000397396 GJB1P08034 283 aa26■■□□□ 1.75
TSPAN4-202ENST00000397396 ZNF165P49910 485 aa26■■□□□ 1.75
TSPAN4-202ENST00000397396 NCKAP1LP55160 1127 aa26■■□□□ 1.75
TSPAN4-202ENST00000397396 PEX3P56589 373 aa26■■□□□ 1.75
TSPAN4-202ENST00000397396 TMEM143Q96AN5 459 aa26■■□□□ 1.75
TSPAN4-202ENST00000397396 NTPCRQ9BSD7 190 aaKnown RBP26■■□□□ 1.75
TSPAN4-202ENST00000397396 KMT5AQ9NQR1 393 aa26■■□□□ 1.75
TSPAN4-202ENST00000397396 SUCLA2Q9P2R7 463 aaPredicted RBP26■■□□□ 1.75
TSPAN4-202ENST00000397396 HDAC6Q9UBN7 1215 aa26■■□□□ 1.75
TSPAN4-202ENST00000397396 GTF2IRD1Q9UHL9 959 aa26■■□□□ 1.75
TSPAN4-202ENST00000397396 KAT6AQ92794 2004 aa25.99■■□□□ 1.75
TSPAN4-202ENST00000397396 SMIM35A0A1B0GVV1 85 aa25.99■■□□□ 1.75
TSPAN4-202ENST00000397396 MARCH8Q5T0T0 291 aa25.99■■□□□ 1.75
TSPAN4-202ENST00000397396 TAF2Q6P1X5 1199 aa25.99■■□□□ 1.75
TSPAN4-202ENST00000397396 C11orf57Q6ZUT1 292 aaPredicted RBP25.99■■□□□ 1.75
TSPAN4-202ENST00000397396 ZNF720Q7Z2F6 126 aa25.99■■□□□ 1.75
TSPAN4-202ENST00000397396 LINC01465Q8N7H1 131 aa25.99■■□□□ 1.75
TSPAN4-202ENST00000397396 KCNN1Q92952 543 aa25.99■■□□□ 1.75
TSPAN4-202ENST00000397396 VTI1AQ96AJ9 217 aa25.99■■□□□ 1.75
TSPAN4-202ENST00000397396 TBC1D7Q9P0N9 293 aa25.99■■□□□ 1.75
TSPAN4-202ENST00000397396 BICDL2A1A5D9 508 aa25.98■■□□□ 1.75
TSPAN4-202ENST00000397396 CCDC169A6NNP5 214 aa25.98■■□□□ 1.75
TSPAN4-202ENST00000397396 PRCPP42785 496 aa25.98■■□□□ 1.75
TSPAN4-202ENST00000397396 NPTX2P47972 431 aa25.98■■□□□ 1.75
TSPAN4-202ENST00000397396 ADAM17P78536 824 aa25.98■■□□□ 1.75
TSPAN4-202ENST00000397396 PAK1Q13153 545 aa25.98■■□□□ 1.75
TSPAN4-202ENST00000397396 BMT2Q1RMZ1 405 aa25.98■■□□□ 1.75
TSPAN4-202ENST00000397396 FAM47CQ5HY64 1035 aa25.98■■□□□ 1.75
TSPAN4-202ENST00000397396 SMYD4Q8IYR2 804 aaPredicted RBP25.98■■□□□ 1.75
TSPAN4-202ENST00000397396 LRRC71Q8N4P6 559 aa25.98■■□□□ 1.75
TSPAN4-202ENST00000397396 FIZ1Q96SL8 496 aa25.98■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms