RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 DENND3A2RUS2 1198 aa9.96□□□□□ -0.82
CAPN3-208ENST00000397204 SMCO2A6NFE2 343 aa9.96□□□□□ -0.82
CAPN3-208ENST00000397204 TMEM221A6NGB7 291 aa9.96□□□□□ -0.82
CAPN3-208ENST00000397204 C9IYK1 514 aa9.96□□□□□ -0.82
CAPN3-208ENST00000397204 hCG_1984214I3L0E3 225 aa9.96□□□□□ -0.82
CAPN3-208ENST00000397204 M0R296 226 aa9.96□□□□□ -0.82
CAPN3-208ENST00000397204 ATF7P17544 494 aaPredicted RBP9.96□□□□□ -0.82
CAPN3-208ENST00000397204 ZNF76P36508 570 aa9.96□□□□□ -0.82
CAPN3-208ENST00000397204 GCGRP47871 477 aa9.96□□□□□ -0.82
CAPN3-208ENST00000397204 CRYBB1P53674 252 aaPredicted RBP9.96□□□□□ -0.82
CAPN3-208ENST00000397204 NAPAP54920 295 aa9.96□□□□□ -0.82
CAPN3-208ENST00000397204 ZXDAP98168 799 aa9.96□□□□□ -0.82
CAPN3-208ENST00000397204 ITGB3BPQ13352 177 aaPredicted RBP9.96□□□□□ -0.82
CAPN3-208ENST00000397204 AP3B2Q13367 1082 aa9.96□□□□□ -0.82
CAPN3-208ENST00000397204 TMEM266Q2M3C6 531 aa9.96□□□□□ -0.82
CAPN3-208ENST00000397204 SPOUT1Q5T280 376 aaKnown RBP9.96□□□□□ -0.82
CAPN3-208ENST00000397204 CREB3L3Q68CJ9 461 aa9.96□□□□□ -0.82
CAPN3-208ENST00000397204 TMEM184AQ6ZMB5 413 aa9.96□□□□□ -0.82
CAPN3-208ENST00000397204 ZNF713Q8N859 430 aaPredicted RBP9.96□□□□□ -0.82
CAPN3-208ENST00000397204 ATP8B4Q8TF62 1192 aa9.96□□□□□ -0.82
CAPN3-208ENST00000397204 ATP6V0A4Q9HBG4 840 aa9.96□□□□□ -0.82
CAPN3-208ENST00000397204 ERVK-5Q9HDB9 667 aa9.96□□□□□ -0.82
CAPN3-208ENST00000397204 RBM28Q9NW13 759 aaKnown RBP9.96□□□□□ -0.82
CAPN3-208ENST00000397204 PUF60Q9UHX1 559 aaKnown RBP9.96□□□□□ -0.82
CAPN3-208ENST00000397204 ST3GAL5Q9UNP4 418 aa9.96□□□□□ -0.82
CAPN3-208ENST00000397204 NOC2LQ9Y3T9 749 aaKnown RBP9.96□□□□□ -0.82
CAPN3-208ENST00000397204 USP15Q9Y4E8 981 aaPredicted RBP9.96□□□□□ -0.82
CAPN3-208ENST00000397204 COL1A2P08123 1366 aa9.96□□□□□ -0.82
CAPN3-208ENST00000397204 WDR87Q6ZQQ6 2873 aa9.95□□□□□ -0.82
CAPN3-208ENST00000397204 TBKBP1A7MCY6 615 aa9.95□□□□□ -0.82
CAPN3-208ENST00000397204 BACH1O14867 736 aa9.95□□□□□ -0.82
CAPN3-208ENST00000397204 DHX15O43143 795 aaKnown RBP9.95□□□□□ -0.82
CAPN3-208ENST00000397204 FGF18O76093 207 aa9.95□□□□□ -0.82
CAPN3-208ENST00000397204 CSPG5O95196 566 aa9.95□□□□□ -0.82
CAPN3-208ENST00000397204 GLP2RO95838 553 aa9.95□□□□□ -0.82
CAPN3-208ENST00000397204 CCNE2O96020 404 aa9.95□□□□□ -0.82
CAPN3-208ENST00000397204 CLCN1P35523 988 aa9.95□□□□□ -0.82
CAPN3-208ENST00000397204 SREBF1P36956 1147 aa9.95□□□□□ -0.82
CAPN3-208ENST00000397204 GATMP50440 423 aa9.95□□□□□ -0.82
CAPN3-208ENST00000397204 ADCY7P51828 1080 aa9.95□□□□□ -0.82
CAPN3-208ENST00000397204 FUT2Q10981 343 aa9.95□□□□□ -0.82
CAPN3-208ENST00000397204 COL9A3Q14050 684 aaPredicted RBP9.95□□□□□ -0.82
CAPN3-208ENST00000397204 FAM102BQ5T8I3 360 aa9.95□□□□□ -0.82
CAPN3-208ENST00000397204 RNF20Q5VTR2 975 aa9.95□□□□□ -0.82
CAPN3-208ENST00000397204 WWC2Q6AWC2 1192 aa9.95□□□□□ -0.82
CAPN3-208ENST00000397204 MCTP2Q6DN12 878 aa9.95□□□□□ -0.82
CAPN3-208ENST00000397204 SWSAP1Q6NVH7 229 aa9.95□□□□□ -0.82
CAPN3-208ENST00000397204 MIS18BP1Q6P0N0 1132 aa9.95□□□□□ -0.82
CAPN3-208ENST00000397204 PDXDC2PQ6P474 469 aa9.95□□□□□ -0.82
CAPN3-208ENST00000397204 MICU3Q86XE3 530 aa9.95□□□□□ -0.82
CAPN3-208ENST00000397204 RASGRP4Q8TDF6 673 aa9.95□□□□□ -0.82
CAPN3-208ENST00000397204 SUSD6Q92537 303 aa9.95□□□□□ -0.82
CAPN3-208ENST00000397204 ESYT1Q9BSJ8 1104 aa9.95□□□□□ -0.82
CAPN3-208ENST00000397204 ANO3Q9BYT9 981 aa9.95□□□□□ -0.82
CAPN3-208ENST00000397204 ELAC1Q9H777 363 aaKnown RBP9.95□□□□□ -0.82
CAPN3-208ENST00000397204 ZNF302Q9NR11 478 aa9.95□□□□□ -0.82
CAPN3-208ENST00000397204 TLR9Q9NR96 1032 aa9.95□□□□□ -0.82
CAPN3-208ENST00000397204 TBC1D22BQ9NU19 505 aa9.95□□□□□ -0.82
CAPN3-208ENST00000397204 TYW1Q9NV66 732 aaKnown RBP9.95□□□□□ -0.82
CAPN3-208ENST00000397204 TMEM161AQ9NX61 479 aa9.95□□□□□ -0.82
CAPN3-208ENST00000397204 TMEM260Q9NX78 707 aa9.95□□□□□ -0.82
CAPN3-208ENST00000397204 BARHL2Q9NY43 387 aa9.95□□□□□ -0.82
CAPN3-208ENST00000397204 GINS2Q9Y248 185 aa9.95□□□□□ -0.82
CAPN3-208ENST00000397204 LZTS1Q9Y250 596 aa9.95□□□□□ -0.82
CAPN3-208ENST00000397204 RALGAPA2Q2PPJ7 1873 aa9.95□□□□□ -0.82
CAPN3-208ENST00000397204 RIF1Q5UIP0 2472 aaKnown RBP9.95□□□□□ -0.82
CAPN3-208ENST00000397204 USP34Q70CQ2 3546 aa9.95□□□□□ -0.82
CAPN3-208ENST00000397204 CFAP54Q96N23 3096 aa9.94□□□□□ -0.82
CAPN3-208ENST00000397204 IPO5O00410 1097 aaKnown RBP9.94□□□□□ -0.82
CAPN3-208ENST00000397204 PER2O15055 1255 aa9.94□□□□□ -0.82
CAPN3-208ENST00000397204 HOXA2O43364 376 aa9.94□□□□□ -0.82
CAPN3-208ENST00000397204 MGEA5O60502 916 aa9.94□□□□□ -0.82
CAPN3-208ENST00000397204 CYP3A4P08684 503 aa9.94□□□□□ -0.82
CAPN3-208ENST00000397204 SRGAP2BP0DMP2 458 aa9.94□□□□□ -0.82
CAPN3-208ENST00000397204 CD46P15529 392 aa9.94□□□□□ -0.82
CAPN3-208ENST00000397204 HOXB8P17481 243 aaPredicted RBP9.94□□□□□ -0.82
CAPN3-208ENST00000397204 ERVFC1P60507 584 aa9.94□□□□□ -0.82
CAPN3-208ENST00000397204 EXOSC10Q01780 885 aaKnown RBP9.94□□□□□ -0.82
CAPN3-208ENST00000397204 PLCB3Q01970 1234 aa9.94□□□□□ -0.82
CAPN3-208ENST00000397204 DUSP6Q16828 381 aa9.94□□□□□ -0.82
CAPN3-208ENST00000397204 APOA5Q6Q788 366 aa9.94□□□□□ -0.82
CAPN3-208ENST00000397204 PLA2G4DQ86XP0 818 aa9.94□□□□□ -0.82
CAPN3-208ENST00000397204 RAB11FIP4Q86YS3 637 aa9.94□□□□□ -0.82
CAPN3-208ENST00000397204 SUGP1Q8IWZ8 645 aaKnown RBP9.94□□□□□ -0.82
CAPN3-208ENST00000397204 THNSL1Q8IYQ7 743 aa9.94□□□□□ -0.82
CAPN3-208ENST00000397204 FBXL6Q8N531 539 aa9.94□□□□□ -0.82
CAPN3-208ENST00000397204 NEK1Q96PY6 1258 aa9.94□□□□□ -0.82
CAPN3-208ENST00000397204 LRRC2Q9BYS8 371 aa9.94□□□□□ -0.82
CAPN3-208ENST00000397204 NGRNQ9NPE2 291 aaKnown RBP9.94□□□□□ -0.82
CAPN3-208ENST00000397204 BARX2Q9UMQ3 279 aaPredicted RBP9.94□□□□□ -0.82
CAPN3-208ENST00000397204 MAFBQ9Y5Q3 323 aaPredicted RBP9.94□□□□□ -0.82
CAPN3-208ENST00000397204 NLRC5Q86WI3 1866 aa9.93□□□□□ -0.82
CAPN3-208ENST00000397204 DOCK5Q9H7D0 1870 aa9.93□□□□□ -0.82
CAPN3-208ENST00000397204 ZBTB42B2RXF5 422 aa9.93□□□□□ -0.82
CAPN3-208ENST00000397204 FSCN2O14926 492 aa9.93□□□□□ -0.82
CAPN3-208ENST00000397204 MAGEB2O15479 319 aa9.93□□□□□ -0.82
CAPN3-208ENST00000397204 ZBTB43O43298 467 aa9.93□□□□□ -0.82
CAPN3-208ENST00000397204 GPR32O75388 356 aa9.93□□□□□ -0.82
CAPN3-208ENST00000397204 LAG3P18627 525 aa9.93□□□□□ -0.82
CAPN3-208ENST00000397204 ATP4AP20648 1035 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms