RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 E4F1Q66K89 784 aaPredicted RBP16.48■□□□□ 0.23
CAPN3-207ENST00000397200 PLA2G4FQ68DD2 849 aa16.48■□□□□ 0.23
CAPN3-207ENST00000397200 ANO5Q75V66 913 aa16.48■□□□□ 0.23
CAPN3-207ENST00000397200 TMEM139Q8IV31 216 aa16.48■□□□□ 0.23
CAPN3-207ENST00000397200 ARRDC4Q8NCT1 418 aa16.48■□□□□ 0.23
CAPN3-207ENST00000397200 BBXQ8WY36 941 aaPredicted RBP16.48■□□□□ 0.23
CAPN3-207ENST00000397200 KATNAL1Q9BW62 490 aa16.48■□□□□ 0.23
CAPN3-207ENST00000397200 MCOLN1Q9GZU1 580 aa16.48■□□□□ 0.23
CAPN3-207ENST00000397200 ITIH6Q6UXX5 1313 aa16.47■□□□□ 0.23
CAPN3-207ENST00000397200 TMEM150BA6NC51 233 aa16.47■□□□□ 0.23
CAPN3-207ENST00000397200 USP27XA6NNY8 438 aa16.47■□□□□ 0.23
CAPN3-207ENST00000397200 AMPD3Q01432 767 aa16.47■□□□□ 0.23
CAPN3-207ENST00000397200 HSP90AA4PQ58FG1 418 aa16.47■□□□□ 0.23
CAPN3-207ENST00000397200 XKR9Q5GH70 373 aa16.47■□□□□ 0.23
CAPN3-207ENST00000397200 SYT2Q8N9I0 419 aaPredicted RBP16.47■□□□□ 0.23
CAPN3-207ENST00000397200 KAT2BQ92831 832 aa16.47■□□□□ 0.23
CAPN3-207ENST00000397200 CEP170P1Q96L14 293 aa16.47■□□□□ 0.23
CAPN3-207ENST00000397200 MTG1Q9BT17 334 aaPredicted RBP16.47■□□□□ 0.23
CAPN3-207ENST00000397200 UQCRHLA0A096LP55 91 aa16.46■□□□□ 0.23
CAPN3-207ENST00000397200 HBP1O60381 514 aa16.46■□□□□ 0.23
CAPN3-207ENST00000397200 ASGR1P07306 291 aa16.46■□□□□ 0.23
CAPN3-207ENST00000397200 UQCRHP07919 91 aa16.46■□□□□ 0.23
CAPN3-207ENST00000397200 RARRES1P49788 294 aa16.46■□□□□ 0.23
CAPN3-207ENST00000397200 PSEN2P49810 448 aa16.46■□□□□ 0.23
CAPN3-207ENST00000397200 SLC12A3P55017 1021 aa16.46■□□□□ 0.23
CAPN3-207ENST00000397200 NPEPPSP55786 919 aa16.46■□□□□ 0.23
CAPN3-207ENST00000397200 CHMP4BP1P59074 171 aa16.46■□□□□ 0.23
CAPN3-207ENST00000397200 MFSD10Q14728 455 aa16.46■□□□□ 0.23
CAPN3-207ENST00000397200 KIAA0753Q2KHM9 967 aa16.46■□□□□ 0.23
CAPN3-207ENST00000397200 MTERF2Q49AM1 385 aa16.46■□□□□ 0.23
CAPN3-207ENST00000397200 CCSAPQ6IQ19 270 aaPredicted RBP16.46■□□□□ 0.23
CAPN3-207ENST00000397200 CXCL17Q6UXB2 119 aa16.46■□□□□ 0.23
CAPN3-207ENST00000397200 GPBP1Q86WP2 473 aa16.46■□□□□ 0.23
CAPN3-207ENST00000397200 DHTKD1Q96HY7 919 aaPredicted RBP16.46■□□□□ 0.23
CAPN3-207ENST00000397200 TSEN34Q9BSV6 310 aaKnown RBP16.46■□□□□ 0.23
CAPN3-207ENST00000397200 NIFKQ9BYG3 293 aaKnown RBP16.46■□□□□ 0.23
CAPN3-207ENST00000397200 LRRC27Q9C0I9 530 aa16.46■□□□□ 0.23
CAPN3-207ENST00000397200 RNPEPQ9H4A4 650 aa16.46■□□□□ 0.23
CAPN3-207ENST00000397200 KAT6AQ92794 2004 aa16.46■□□□□ 0.22
CAPN3-207ENST00000397200 KBTBD13C9JR72 458 aa16.45■□□□□ 0.22
CAPN3-207ENST00000397200 TPD52L1Q16890 204 aaPredicted RBP16.45■□□□□ 0.22
CAPN3-207ENST00000397200 TC2NQ8N9U0 490 aa16.45■□□□□ 0.22
CAPN3-207ENST00000397200 CCDC47Q96A33 483 aaKnown RBP16.45■□□□□ 0.22
CAPN3-207ENST00000397200 C16orf45Q96MC5 204 aaPredicted RBP16.45■□□□□ 0.22
CAPN3-207ENST00000397200 SH2D3AQ9BRG2 576 aa16.45■□□□□ 0.22
CAPN3-207ENST00000397200 CYP26B1Q9NR63 512 aa16.45■□□□□ 0.22
CAPN3-207ENST00000397200 SCN10AQ9Y5Y9 1956 aa16.45■□□□□ 0.22
CAPN3-207ENST00000397200 MOXD2PA6NHM9 499 aa16.45■□□□□ 0.22
CAPN3-207ENST00000397200 GJB1P08034 283 aa16.45■□□□□ 0.22
CAPN3-207ENST00000397200 TNNT1P13805 278 aa16.45■□□□□ 0.22
CAPN3-207ENST00000397200 STIM1Q13586 685 aa16.45■□□□□ 0.22
CAPN3-207ENST00000397200 KRT31Q15323 416 aa16.45■□□□□ 0.22
CAPN3-207ENST00000397200 TCP11X2Q5H9J9 407 aa16.45■□□□□ 0.22
CAPN3-207ENST00000397200 TTI2Q6NXR4 508 aa16.45■□□□□ 0.22
CAPN3-207ENST00000397200 PADI6Q6TGC4 694 aa16.45■□□□□ 0.22
CAPN3-207ENST00000397200 IRF2BP1Q8IU81 584 aa16.45■□□□□ 0.22
CAPN3-207ENST00000397200 BMP2KQ9NSY1 1161 aaPredicted RBP16.45■□□□□ 0.22
CAPN3-207ENST00000397200 OGDHLQ9ULD0 1010 aa16.45■□□□□ 0.22
CAPN3-207ENST00000397200 PPME1Q9Y570 386 aa16.45■□□□□ 0.22
CAPN3-207ENST00000397200 PVALEFA0A1B0GWK0 134 aa16.44■□□□□ 0.22
CAPN3-207ENST00000397200 HAS3O00219 553 aa16.44■□□□□ 0.22
CAPN3-207ENST00000397200 DYNC1I1O14576 645 aa16.44■□□□□ 0.22
CAPN3-207ENST00000397200 PSMA7O14818 248 aa16.44■□□□□ 0.22
CAPN3-207ENST00000397200 TEX33O43247 280 aa16.44■□□□□ 0.22
CAPN3-207ENST00000397200 CABYRO75952 493 aa16.44■□□□□ 0.22
CAPN3-207ENST00000397200 KRT18P05783 430 aaKnown RBP16.44■□□□□ 0.22
CAPN3-207ENST00000397200 INSRRP14616 1297 aa16.44■□□□□ 0.22
CAPN3-207ENST00000397200 ACLYP53396 1101 aa16.44■□□□□ 0.22
CAPN3-207ENST00000397200 EHHADHQ08426 723 aa16.44■□□□□ 0.22
CAPN3-207ENST00000397200 FILIP1LQ4L180 1135 aa16.44■□□□□ 0.22
CAPN3-207ENST00000397200 ZNF484Q5JVG2 852 aa16.44■□□□□ 0.22
CAPN3-207ENST00000397200 RINT1Q6NUQ1 792 aa16.44■□□□□ 0.22
CAPN3-207ENST00000397200 UNC13DQ70J99 1090 aa16.44■□□□□ 0.22
CAPN3-207ENST00000397200 NOC3LQ8WTT2 800 aaKnown RBP16.44■□□□□ 0.22
CAPN3-207ENST00000397200 U2AF1L4Q8WU68 220 aaKnown RBP16.44■□□□□ 0.22
CAPN3-207ENST00000397200 THAP9Q9H5L6 903 aa16.44■□□□□ 0.22
CAPN3-207ENST00000397200 EXOC1Q9NV70 894 aa16.44■□□□□ 0.22
CAPN3-207ENST00000397200 KCND2Q9NZV8 630 aa16.44■□□□□ 0.22
CAPN3-207ENST00000397200 COL1A2P08123 1366 aa16.44■□□□□ 0.22
CAPN3-207ENST00000397200 MYMKA6NI61 221 aa16.43■□□□□ 0.22
CAPN3-207ENST00000397200 KIF2AO00139 706 aaPredicted RBP16.43■□□□□ 0.22
CAPN3-207ENST00000397200 DNM1LO00429 736 aa16.43■□□□□ 0.22
CAPN3-207ENST00000397200 ARHGAP6O43182 974 aa16.43■□□□□ 0.22
CAPN3-207ENST00000397200 USO1O60763 962 aaKnown RBP16.43■□□□□ 0.22
CAPN3-207ENST00000397200 DGAT1O75907 488 aa16.43■□□□□ 0.22
CAPN3-207ENST00000397200 SGPL1O95470 568 aa16.43■□□□□ 0.22
CAPN3-207ENST00000397200 TFRCP02786 760 aaKnown RBP16.43■□□□□ 0.22
CAPN3-207ENST00000397200 CYP11B2P19099 503 aa16.43■□□□□ 0.22
CAPN3-207ENST00000397200 FECHP22830 423 aa16.43■□□□□ 0.22
CAPN3-207ENST00000397200 COPB1P53618 953 aaKnown RBP16.43■□□□□ 0.22
CAPN3-207ENST00000397200 ASIC1P78348 528 aa16.43■□□□□ 0.22
CAPN3-207ENST00000397200 PPFIA1Q13136 1202 aa16.43■□□□□ 0.22
CAPN3-207ENST00000397200 TARBP2Q15633 366 aaKnown RBP16.43■□□□□ 0.22
CAPN3-207ENST00000397200 VTI1AQ96AJ9 217 aa16.43■□□□□ 0.22
CAPN3-207ENST00000397200 PPP1R13BQ96KQ4 1090 aa16.43■□□□□ 0.22
CAPN3-207ENST00000397200 RUSC1Q9BVN2 902 aa16.43■□□□□ 0.22
CAPN3-207ENST00000397200 CRISPLD2Q9H0B8 497 aa16.43■□□□□ 0.22
CAPN3-207ENST00000397200 ZBTB42B2RXF5 422 aa16.42■□□□□ 0.22
CAPN3-207ENST00000397200 KCNJ18B7U540 433 aa16.42■□□□□ 0.22
CAPN3-207ENST00000397200 CCP110O43303 1012 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms