RNA–Protein interactions for RNA: ENST00000397053.6

UPF2-203, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UPF2, Length 5,369 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-203ENST00000397053 MAP4P27816 1152 aaKnown RBP7.67□□□□□ -1.18
UPF2-203ENST00000397053 ADORA2BP29275 332 aa7.67□□□□□ -1.18
UPF2-203ENST00000397053 AKT1P31749 480 aa7.67□□□□□ -1.18
UPF2-203ENST00000397053 ITPRIPL1Q6GPH6 555 aa7.67□□□□□ -1.18
UPF2-203ENST00000397053 TMEM270Q6UE05 265 aa7.67□□□□□ -1.18
UPF2-203ENST00000397053 LCORLQ8N3X6 602 aa7.67□□□□□ -1.18
UPF2-203ENST00000397053 PIP4K2CQ8TBX8 421 aa7.67□□□□□ -1.18
UPF2-203ENST00000397053 EPB41L5Q9HCM4 733 aa7.67□□□□□ -1.18
UPF2-203ENST00000397053 SRPRBQ9Y5M8 271 aaKnown RBP7.67□□□□□ -1.18
UPF2-203ENST00000397053 ADCY9O60503 1353 aa7.67□□□□□ -1.18
UPF2-203ENST00000397053 AFF2P51816 1311 aa7.67□□□□□ -1.18
UPF2-203ENST00000397053 ARHGAP10A1A4S6 786 aa7.67□□□□□ -1.18
UPF2-203ENST00000397053 SYCE1LA8MT33 242 aa7.67□□□□□ -1.18
UPF2-203ENST00000397053 DYNC1LI2O43237 492 aaPredicted RBP7.67□□□□□ -1.18
UPF2-203ENST00000397053 ECE2O60344 883 aa7.67□□□□□ -1.18
UPF2-203ENST00000397053 NPM3O75607 178 aaKnown RBP7.67□□□□□ -1.18
UPF2-203ENST00000397053 CYP2B6P20813 491 aa7.67□□□□□ -1.18
UPF2-203ENST00000397053 CCNE1P24864 410 aa7.67□□□□□ -1.18
UPF2-203ENST00000397053 SMARCA1P28370 1054 aa7.67□□□□□ -1.18
UPF2-203ENST00000397053 NME3Q13232 169 aa7.67□□□□□ -1.18
UPF2-203ENST00000397053 SLC39A14Q15043 492 aa7.67□□□□□ -1.18
UPF2-203ENST00000397053 SPATS2Q86XZ4 545 aaKnown RBP7.67□□□□□ -1.18
UPF2-203ENST00000397053 SH3TC2Q8TF17 1288 aa7.67□□□□□ -1.18
UPF2-203ENST00000397053 TNIP3Q96KP6 325 aa7.67□□□□□ -1.18
UPF2-203ENST00000397053 TPX2Q9ULW0 747 aaKnown RBP7.67□□□□□ -1.18
UPF2-203ENST00000397053 M0QYV0 167 aa7.67□□□□□ -1.18
UPF2-203ENST00000397053 ALDH1A2O94788 518 aa7.67□□□□□ -1.18
UPF2-203ENST00000397053 FDX1P10109 184 aa7.67□□□□□ -1.18
UPF2-203ENST00000397053 ESRRAP11474 423 aaPredicted RBP7.67□□□□□ -1.18
UPF2-203ENST00000397053 CHRNA3P32297 505 aa7.67□□□□□ -1.18
UPF2-203ENST00000397053 HSD17B4P51659 736 aa7.67□□□□□ -1.18
UPF2-203ENST00000397053 NDUFA8P51970 172 aa7.67□□□□□ -1.18
UPF2-203ENST00000397053 HUNKP57058 714 aa7.67□□□□□ -1.18
UPF2-203ENST00000397053 TMPRSS15P98073 1019 aa7.67□□□□□ -1.18
UPF2-203ENST00000397053 CDK17Q00537 523 aa7.67□□□□□ -1.18
UPF2-203ENST00000397053 ZBTB17Q13105 803 aa7.67□□□□□ -1.18
UPF2-203ENST00000397053 SYTL3Q4VX76 610 aa7.67□□□□□ -1.18
UPF2-203ENST00000397053 NAALADL2Q58DX5 795 aa7.67□□□□□ -1.18
UPF2-203ENST00000397053 ZMYM1Q5SVZ6 1142 aa7.67□□□□□ -1.18
UPF2-203ENST00000397053 SWSAP1Q6NVH7 229 aa7.67□□□□□ -1.18
UPF2-203ENST00000397053 ALKBH5Q6P6C2 394 aaKnown RBP7.67□□□□□ -1.18
UPF2-203ENST00000397053 PADI6Q6TGC4 694 aa7.67□□□□□ -1.18
UPF2-203ENST00000397053 DCAF4Q8WV16 495 aa7.67□□□□□ -1.18
UPF2-203ENST00000397053 PGBD4Q96DM1 585 aa7.67□□□□□ -1.18
UPF2-203ENST00000397053 RBM41Q96IZ5 413 aaKnown RBP7.67□□□□□ -1.18
UPF2-203ENST00000397053 ZFP42Q96MM3 310 aa7.67□□□□□ -1.18
UPF2-203ENST00000397053 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.67□□□□□ -1.183e-11■■□□□ 12.6
UPF2-203ENST00000397053 FAM213AQ9BRX8 229 aa7.67□□□□□ -1.18
UPF2-203ENST00000397053 KIFC3Q9BVG8 833 aa7.67□□□□□ -1.18
UPF2-203ENST00000397053 ING2Q9H160 280 aa7.67□□□□□ -1.18
UPF2-203ENST00000397053 FGFR1OP2Q9NVK5 253 aa7.67□□□□□ -1.18
UPF2-203ENST00000397053 WARS2Q9UGM6 360 aaKnown RBP7.67□□□□□ -1.18
UPF2-203ENST00000397053 DBNLQ9UJU6 430 aaKnown RBP7.67□□□□□ -1.18
UPF2-203ENST00000397053 PIN4Q9Y237 131 aaKnown RBP7.67□□□□□ -1.18
UPF2-203ENST00000397053 PTPN23Q9H3S7 1636 aa7.67□□□□□ -1.18
UPF2-203ENST00000397053 ABCA10Q8WWZ4 1543 aa7.67□□□□□ -1.18
UPF2-203ENST00000397053 CYP2D7A0A087X1C5 515 aa7.66□□□□□ -1.18
UPF2-203ENST00000397053 SPDYE5A6NIY4 337 aa7.66□□□□□ -1.18
UPF2-203ENST00000397053 ENC1O14682 589 aa7.66□□□□□ -1.18
UPF2-203ENST00000397053 CTNND1O60716 968 aaKnown RBP7.66□□□□□ -1.18
UPF2-203ENST00000397053 FTCDO95954 541 aa7.66□□□□□ -1.18
UPF2-203ENST00000397053 TXNP10599 105 aaKnown RBP7.66□□□□□ -1.18
UPF2-203ENST00000397053 DAB2P98082 770 aa7.66□□□□□ -1.18
UPF2-203ENST00000397053 SPDYE7PQ495Y7 208 aa7.66□□□□□ -1.18
UPF2-203ENST00000397053 HEATR6Q6AI08 1181 aaKnown RBP7.66□□□□□ -1.18
UPF2-203ENST00000397053 CLEC4GQ6UXB4 293 aa7.66□□□□□ -1.18
UPF2-203ENST00000397053 HAUS6Q7Z4H7 955 aa7.66□□□□□ -1.18
UPF2-203ENST00000397053 CRLF3Q8IUI8 442 aa7.66□□□□□ -1.18
UPF2-203ENST00000397053 SPATA2LQ8IUW3 424 aaPredicted RBP7.66□□□□□ -1.18
UPF2-203ENST00000397053 KLHL29Q96CT2 875 aa7.66□□□□□ -1.18
UPF2-203ENST00000397053 KIF12Q96FN5 646 aa7.66□□□□□ -1.18
UPF2-203ENST00000397053 KIF2CQ99661 725 aa7.66□□□□□ -1.18
UPF2-203ENST00000397053 FAM217BQ9NTX9 383 aaPredicted RBP7.66□□□□□ -1.18
UPF2-203ENST00000397053 EHD2Q9NZN4 543 aa7.66□□□□□ -1.18
UPF2-203ENST00000397053 GABBR1Q9UBS5 961 aa7.66□□□□□ -1.18
UPF2-203ENST00000397053 ANAPC7Q9UJX3 599 aa7.66□□□□□ -1.18
UPF2-203ENST00000397053 CAPN11Q9UMQ6 739 aa7.66□□□□□ -1.18
UPF2-203ENST00000397053 CLIC4Q9Y696 253 aa7.66□□□□□ -1.18
UPF2-203ENST00000397053 PALLDQ8WX93 1383 aa7.66□□□□□ -1.18
UPF2-203ENST00000397053 COPEO14579 308 aa7.66□□□□□ -1.18
UPF2-203ENST00000397053 ZNF263O14978 683 aa7.66□□□□□ -1.18
UPF2-203ENST00000397053 CALB1P05937 261 aa7.66□□□□□ -1.18
UPF2-203ENST00000397053 SLFN14P0C7P3 912 aa7.66□□□□□ -1.18
UPF2-203ENST00000397053 ARL4CP56559 192 aa7.66□□□□□ -1.18
UPF2-203ENST00000397053 TMEM132BQ14DG7 1078 aa7.66□□□□□ -1.18
UPF2-203ENST00000397053 GRAMD1BQ3KR37 738 aa7.66□□□□□ -1.18
UPF2-203ENST00000397053 PDXDC1Q6P996 788 aa7.66□□□□□ -1.18
UPF2-203ENST00000397053 DGKHQ86XP1 1220 aa7.66□□□□□ -1.18
UPF2-203ENST00000397053 RHOT2Q8IXI1 618 aa7.66□□□□□ -1.18
UPF2-203ENST00000397053 SMYD4Q8IYR2 804 aaPredicted RBP7.66□□□□□ -1.18
UPF2-203ENST00000397053 OR6J1Q8NGC5 347 aa7.66□□□□□ -1.18
UPF2-203ENST00000397053 DPF3Q92784 378 aa7.66□□□□□ -1.18
UPF2-203ENST00000397053 MRPL4Q9BYD3 311 aaKnown RBP7.66□□□□□ -1.18
UPF2-203ENST00000397053 DNAJC17Q9NVM6 304 aaKnown RBP7.66□□□□□ -1.18
UPF2-203ENST00000397053 CNOT8Q9UFF9 292 aaKnown RBP7.66□□□□□ -1.18
UPF2-203ENST00000397053 PCSK1NQ9UHG2 260 aa7.66□□□□□ -1.18
UPF2-203ENST00000397053 PCDHA6Q9UN73 950 aa7.66□□□□□ -1.18
UPF2-203ENST00000397053 PCDHA8Q9Y5H6 950 aa7.66□□□□□ -1.18
UPF2-203ENST00000397053 FAM196BA6NMK8 535 aa7.66□□□□□ -1.18
UPF2-203ENST00000397053 USP17L15C9J2P7 530 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms