RNA–Protein interactions for RNA: ENST00000396854.8

TM9SF1-202, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 1 (best) BASIC

Gene TM9SF1, Length 2,055 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-202ENST00000396854 CEP89Q96ST8 783 aa16.4■□□□□ 0.22
TM9SF1-202ENST00000396854 PAK6Q9NQU5 681 aaPredicted RBP16.4■□□□□ 0.22
TM9SF1-202ENST00000396854 KLRC4O43908 158 aa16.39■□□□□ 0.21
TM9SF1-202ENST00000396854 ZEB2O60315 1214 aa16.39■□□□□ 0.21
TM9SF1-202ENST00000396854 ATP1A3P13637 1013 aa16.39■□□□□ 0.21
TM9SF1-202ENST00000396854 ASIC1P78348 528 aa16.39■□□□□ 0.21
TM9SF1-202ENST00000396854 GNASQ5JWF2 1037 aa16.39■□□□□ 0.21
TM9SF1-202ENST00000396854 ISM2Q6H9L7 571 aa16.39■□□□□ 0.21
TM9SF1-202ENST00000396854 CCSAPQ6IQ19 270 aaPredicted RBP16.39■□□□□ 0.21
TM9SF1-202ENST00000396854 TIPINQ9BVW5 301 aa16.39■□□□□ 0.21
TM9SF1-202ENST00000396854 KATNAL1Q9BW62 490 aa16.39■□□□□ 0.21
TM9SF1-202ENST00000396854 RNPEPQ9H4A4 650 aa16.39■□□□□ 0.21
TM9SF1-202ENST00000396854 COL1A2P08123 1366 aa16.39■□□□□ 0.21
TM9SF1-202ENST00000396854 PVALEFA0A1B0GWK0 134 aa16.39■□□□□ 0.21
TM9SF1-202ENST00000396854 FRMD3A2A2Y4 597 aa16.39■□□□□ 0.21
TM9SF1-202ENST00000396854 ZBTB42B2RXF5 422 aa16.39■□□□□ 0.21
TM9SF1-202ENST00000396854 HAS3O00219 553 aa16.39■□□□□ 0.21
TM9SF1-202ENST00000396854 DGAT1O75907 488 aa16.39■□□□□ 0.21
TM9SF1-202ENST00000396854 RPN1P04843 607 aaKnown RBP16.39■□□□□ 0.21
TM9SF1-202ENST00000396854 MYL3P08590 195 aa16.39■□□□□ 0.21
TM9SF1-202ENST00000396854 CBX1P83916 185 aa16.39■□□□□ 0.21
TM9SF1-202ENST00000396854 GIT2Q14161 759 aa16.39■□□□□ 0.21
TM9SF1-202ENST00000396854 KCNB1Q14721 858 aa16.39■□□□□ 0.21
TM9SF1-202ENST00000396854 MTERF2Q49AM1 385 aa16.39■□□□□ 0.21
TM9SF1-202ENST00000396854 UNC13DQ70J99 1090 aa16.39■□□□□ 0.21
TM9SF1-202ENST00000396854 DYMQ7RTS9 669 aa16.39■□□□□ 0.21
TM9SF1-202ENST00000396854 SH2D3AQ9BRG2 576 aa16.39■□□□□ 0.21
TM9SF1-202ENST00000396854 REEP2Q9BRK0 252 aa16.39■□□□□ 0.21
TM9SF1-202ENST00000396854 UNC93B1Q9H1C4 597 aa16.39■□□□□ 0.21
TM9SF1-202ENST00000396854 PDLIM7Q9NR12 457 aa16.39■□□□□ 0.21
TM9SF1-202ENST00000396854 ODF2LQ9ULJ1 636 aa16.39■□□□□ 0.21
TM9SF1-202ENST00000396854 TRPC6Q9Y210 931 aa16.39■□□□□ 0.21
TM9SF1-202ENST00000396854 BMP6P22004 513 aa16.38■□□□□ 0.21
TM9SF1-202ENST00000396854 UBASH3AP57075 661 aa16.38■□□□□ 0.21
TM9SF1-202ENST00000396854 NAA30Q147X3 362 aaPredicted RBP16.38■□□□□ 0.21
TM9SF1-202ENST00000396854 RNF180Q86T96 592 aa16.38■□□□□ 0.21
TM9SF1-202ENST00000396854 MLKLQ8NB16 471 aa16.38■□□□□ 0.21
TM9SF1-202ENST00000396854 DHX33Q9H6R0 707 aaKnown RBP16.38■□□□□ 0.21
TM9SF1-202ENST00000396854 DACH1Q9UI36 760 aa16.38■□□□□ 0.21
TM9SF1-202ENST00000396854 NPHP3-ACAD11A0A0J9YXS1 232 aa16.38■□□□□ 0.21
TM9SF1-202ENST00000396854 CCP110O43303 1012 aa16.38■□□□□ 0.21
TM9SF1-202ENST00000396854 USO1O60763 962 aaKnown RBP16.38■□□□□ 0.21
TM9SF1-202ENST00000396854 KRT18P05783 430 aaKnown RBP16.38■□□□□ 0.21
TM9SF1-202ENST00000396854 MTFR1Q15390 333 aa16.38■□□□□ 0.21
TM9SF1-202ENST00000396854 ZNF484Q5JVG2 852 aa16.38■□□□□ 0.21
TM9SF1-202ENST00000396854 PCSK9Q8NBP7 692 aaKnown RBP16.38■□□□□ 0.21
TM9SF1-202ENST00000396854 ARMC5Q96C12 935 aa16.38■□□□□ 0.21
TM9SF1-202ENST00000396854 MTG1Q9BT17 334 aaPredicted RBP16.38■□□□□ 0.21
TM9SF1-202ENST00000396854 L2HGDHQ9H9P8 463 aa16.38■□□□□ 0.21
TM9SF1-202ENST00000396854 PRDM10Q9NQV6 1147 aa16.38■□□□□ 0.21
TM9SF1-202ENST00000396854 RMND1Q9NWS8 449 aa16.38■□□□□ 0.21
TM9SF1-202ENST00000396854 EVPLQ92817 2033 aa16.37■□□□□ 0.21
TM9SF1-202ENST00000396854 RHOBTB3O94955 611 aa16.37■□□□□ 0.21
TM9SF1-202ENST00000396854 SERPINC1P01008 464 aa16.37■□□□□ 0.21
TM9SF1-202ENST00000396854 RFC5P40937 340 aa16.37■□□□□ 0.21
TM9SF1-202ENST00000396854 PSEN2P49810 448 aa16.37■□□□□ 0.21
TM9SF1-202ENST00000396854 EHHADHQ08426 723 aa16.37■□□□□ 0.21
TM9SF1-202ENST00000396854 MFSD10Q14728 455 aa16.37■□□□□ 0.21
TM9SF1-202ENST00000396854 LRRC41Q15345 812 aa16.37■□□□□ 0.21
TM9SF1-202ENST00000396854 KMT5BQ4FZB7 885 aa16.37■□□□□ 0.21
TM9SF1-202ENST00000396854 CT47A1Q5JQC4 288 aaPredicted RBP16.37■□□□□ 0.21
TM9SF1-202ENST00000396854 VSTM4Q8IW00 320 aa16.37■□□□□ 0.21
TM9SF1-202ENST00000396854 MCPH1Q8NEM0 835 aa16.37■□□□□ 0.21
TM9SF1-202ENST00000396854 ZNF333Q96JL9 665 aa16.37■□□□□ 0.21
TM9SF1-202ENST00000396854 TMX1Q9H3N1 280 aa16.37■□□□□ 0.21
TM9SF1-202ENST00000396854 ATP6V0A4Q9HBG4 840 aa16.37■□□□□ 0.21
TM9SF1-202ENST00000396854 MAFO75444 373 aaPredicted RBP16.36■□□□□ 0.21
TM9SF1-202ENST00000396854 SLU7O95391 586 aaKnown RBP16.36■□□□□ 0.21
TM9SF1-202ENST00000396854 CCL5P13501 91 aa16.36■□□□□ 0.21
TM9SF1-202ENST00000396854 INSRRP14616 1297 aa16.36■□□□□ 0.21
TM9SF1-202ENST00000396854 ZSCAN20P17040 1043 aaPredicted RBP16.36■□□□□ 0.21
TM9SF1-202ENST00000396854 ZNF131P52739 623 aa16.36■□□□□ 0.21
TM9SF1-202ENST00000396854 MAPK7Q13164 816 aa16.36■□□□□ 0.21
TM9SF1-202ENST00000396854 KIAA0753Q2KHM9 967 aa16.36■□□□□ 0.21
TM9SF1-202ENST00000396854 CCDC65Q8IXS2 484 aa16.36■□□□□ 0.21
TM9SF1-202ENST00000396854 EXOC8Q8IYI6 725 aa16.36■□□□□ 0.21
TM9SF1-202ENST00000396854 CCDC47Q96A33 483 aaKnown RBP16.36■□□□□ 0.21
TM9SF1-202ENST00000396854 TSEN34Q9BSV6 310 aaKnown RBP16.36■□□□□ 0.21
TM9SF1-202ENST00000396854 XPNPEP1Q9NQW7 623 aa16.36■□□□□ 0.21
TM9SF1-202ENST00000396854 OGFRQ9NZT2 677 aa16.36■□□□□ 0.21
TM9SF1-202ENST00000396854 ASGR1P07306 291 aa16.36■□□□□ 0.21
TM9SF1-202ENST00000396854 IDEP14735 1019 aa16.36■□□□□ 0.21
TM9SF1-202ENST00000396854 POLGP54098 1239 aaPredicted RBP16.36■□□□□ 0.21
TM9SF1-202ENST00000396854 CACNB1Q02641 598 aaPredicted RBP16.36■□□□□ 0.21
TM9SF1-202ENST00000396854 RAD51AP2Q09MP3 1159 aa16.36■□□□□ 0.21
TM9SF1-202ENST00000396854 COASYQ13057 564 aa16.36■□□□□ 0.21
TM9SF1-202ENST00000396854 EMC2Q15006 297 aa16.36■□□□□ 0.21
TM9SF1-202ENST00000396854 KCNA10Q16322 511 aa16.36■□□□□ 0.21
TM9SF1-202ENST00000396854 DAW1Q8N136 415 aa16.36■□□□□ 0.21
TM9SF1-202ENST00000396854 SLC7A3Q8WY07 619 aa16.36■□□□□ 0.21
TM9SF1-202ENST00000396854 PANK4Q9NVE7 773 aa16.36■□□□□ 0.21
TM9SF1-202ENST00000396854 TRIP12Q14669 1992 aaPredicted RBP16.35■□□□□ 0.21
TM9SF1-202ENST00000396854 IGKV6-21A0A0C4DH24 114 aa16.35■□□□□ 0.21
TM9SF1-202ENST00000396854 SPDYE4A6NLX3 237 aa16.35■□□□□ 0.21
TM9SF1-202ENST00000396854 RSPH10B2B2RC85 870 aa16.35■□□□□ 0.21
TM9SF1-202ENST00000396854 GAS2O43903 313 aaKnown RBP16.35■□□□□ 0.21
TM9SF1-202ENST00000396854 HIP1RO75146 1068 aa16.35■□□□□ 0.21
TM9SF1-202ENST00000396854 TBCAO75347 108 aaKnown RBP16.35■□□□□ 0.21
TM9SF1-202ENST00000396854 RSPH10BP0C881 870 aa16.35■□□□□ 0.21
TM9SF1-202ENST00000396854 DMTNQ08495 405 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms