RNA–Protein interactions for RNA: ENST00000396832.5

CSNK1E-203, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-203ENST00000396832 MMP13P45452 471 aa26■■□□□ 1.75
CSNK1E-203ENST00000396832 UHMK1Q8TAS1 419 aaKnown RBP26■■□□□ 1.75
CSNK1E-203ENST00000396832 TXLNGYQ9BZA5 131 aa26■■□□□ 1.75
CSNK1E-203ENST00000396832 ABCF3Q9NUQ8 709 aa26■■□□□ 1.75
CSNK1E-203ENST00000396832 SEPT11Q9NVA2 429 aaKnown RBP26■■□□□ 1.75
CSNK1E-203ENST00000396832 AKAP3O75969 853 aa26■■□□□ 1.75
CSNK1E-203ENST00000396832 VIMP08670 466 aaKnown RBP26■■□□□ 1.75
CSNK1E-203ENST00000396832 KCNJ2P63252 427 aa26■■□□□ 1.75
CSNK1E-203ENST00000396832 ZNF483Q8TF39 744 aaPredicted RBP26■■□□□ 1.75
CSNK1E-203ENST00000396832 PRMT1Q99873 361 aaKnown RBP26■■□□□ 1.75
CSNK1E-203ENST00000396832 NOP53Q9NZM5 478 aaKnown RBP26■■□□□ 1.75
CSNK1E-203ENST00000396832 CDC25CP30307 473 aa25.99■■□□□ 1.75
CSNK1E-203ENST00000396832 ZNF211Q13398 564 aaPredicted RBP25.99■■□□□ 1.75
CSNK1E-203ENST00000396832 KCNMB3Q9NPA1 279 aa25.99■■□□□ 1.75
CSNK1E-203ENST00000396832 GCNT4Q9P109 453 aa25.99■■□□□ 1.75
CSNK1E-203ENST00000396832 KSR1Q8IVT5 923 aa25.99■■□□□ 1.75
CSNK1E-203ENST00000396832 CEP120Q8N960 986 aa25.99■■□□□ 1.75
CSNK1E-203ENST00000396832 ZNF570Q96NI8 536 aa25.99■■□□□ 1.75
CSNK1E-203ENST00000396832 INTS9Q9NV88 658 aaKnown RBP25.99■■□□□ 1.75
CSNK1E-203ENST00000396832 GPR75-ASB3A0A0A6YYF3 556 aa25.98■■□□□ 1.75
CSNK1E-203ENST00000396832 DIAPH2O60879 1101 aa25.98■■□□□ 1.75
CSNK1E-203ENST00000396832 FGGP02679 453 aa25.98■■□□□ 1.75
CSNK1E-203ENST00000396832 XRCC5P13010 732 aaKnown RBP25.98■■□□□ 1.75
CSNK1E-203ENST00000396832 PRR16Q569H4 304 aa25.98■■□□□ 1.75
CSNK1E-203ENST00000396832 ATP8B4Q8TF62 1192 aa25.98■■□□□ 1.75
CSNK1E-203ENST00000396832 NGLY1Q96IV0 654 aa25.98■■□□□ 1.75
CSNK1E-203ENST00000396832 REEP2Q9BRK0 252 aa25.98■■□□□ 1.75
CSNK1E-203ENST00000396832 MXD3Q9BW11 206 aa25.98■■□□□ 1.75
CSNK1E-203ENST00000396832 KIF9Q9HAQ2 790 aa25.98■■□□□ 1.75
CSNK1E-203ENST00000396832 NQO1P15559 274 aaKnown RBP25.98■■□□□ 1.75
CSNK1E-203ENST00000396832 MKRN4PQ13434 485 aaPredicted RBP25.98■■□□□ 1.75
CSNK1E-203ENST00000396832 FOXR2Q6PJQ5 311 aa25.98■■□□□ 1.75
CSNK1E-203ENST00000396832 EPB41L4BQ9H329 900 aa25.98■■□□□ 1.75
CSNK1E-203ENST00000396832 GGT7Q9UJ14 662 aa25.98■■□□□ 1.75
CSNK1E-203ENST00000396832 TNRC6CQ9HCJ0 1690 aaKnown RBP25.98■■□□□ 1.75
CSNK1E-203ENST00000396832 AFF2P51816 1311 aa25.97■■□□□ 1.75
CSNK1E-203ENST00000396832 COL16A1Q07092 1604 aaPredicted RBP25.97■■□□□ 1.75
CSNK1E-203ENST00000396832 PNMA6FA0A0J9YX94 578 aa25.97■■□□□ 1.75
CSNK1E-203ENST00000396832 AFPP02771 609 aaKnown RBP25.97■■□□□ 1.75
CSNK1E-203ENST00000396832 IFI35P80217 286 aaPredicted RBP25.97■■□□□ 1.75
CSNK1E-203ENST00000396832 GNA14O95837 355 aa25.97■■□□□ 1.75
CSNK1E-203ENST00000396832 HOXD13P35453 343 aa25.97■■□□□ 1.75
CSNK1E-203ENST00000396832 POU5F1Q01860 360 aaKnown RBP25.97■■□□□ 1.75
CSNK1E-203ENST00000396832 GRAPQ13588 217 aa25.97■■□□□ 1.75
CSNK1E-203ENST00000396832 ASPRV1Q53RT3 343 aa25.97■■□□□ 1.75
CSNK1E-203ENST00000396832 AADACL2Q6P093 401 aa25.97■■□□□ 1.75
CSNK1E-203ENST00000396832 GRAPLQ8TC17 118 aaPredicted RBP25.97■■□□□ 1.75
CSNK1E-203ENST00000396832 ARHGEF1Q92888 912 aaKnown RBP25.97■■□□□ 1.75
CSNK1E-203ENST00000396832 PGM2Q96G03 612 aa25.97■■□□□ 1.75
CSNK1E-203ENST00000396832 NT5C3AQ9H0P0 336 aa25.97■■□□□ 1.75
CSNK1E-203ENST00000396832 AZI2Q9H6S1 392 aa25.97■■□□□ 1.75
CSNK1E-203ENST00000396832 DDX4Q9NQI0 724 aaKnown RBP25.97■■□□□ 1.75
CSNK1E-203ENST00000396832 SUCLA2Q9P2R7 463 aaPredicted RBP25.97■■□□□ 1.75
CSNK1E-203ENST00000396832 STXBP5LQ9Y2K9 1186 aa25.97■■□□□ 1.75
CSNK1E-203ENST00000396832 ZNF543Q08ER8 600 aa25.96■■□□□ 1.75
CSNK1E-203ENST00000396832 SPDYCQ5MJ68 293 aa25.96■■□□□ 1.75
CSNK1E-203ENST00000396832 GLYCTKQ8IVS8 523 aa25.96■■□□□ 1.75
CSNK1E-203ENST00000396832 CHORDC1Q9UHD1 332 aaPredicted RBP25.96■■□□□ 1.75
CSNK1E-203ENST00000396832 UBOX5O94941 541 aa25.96■■□□□ 1.75
CSNK1E-203ENST00000396832 ALADP13716 330 aa25.96■■□□□ 1.75
CSNK1E-203ENST00000396832 PEX19P40855 299 aa25.96■■□□□ 1.75
CSNK1E-203ENST00000396832 ORC2Q13416 577 aaPredicted RBP25.96■■□□□ 1.75
CSNK1E-203ENST00000396832 UBAP2Q5T6F2 1119 aaKnown RBP25.96■■□□□ 1.75
CSNK1E-203ENST00000396832 DHX36Q9H2U1 1008 aaKnown RBP25.96■■□□□ 1.75
CSNK1E-203ENST00000396832 IGSF9BQ9UPX0 1349 aa25.96■■□□□ 1.75
CSNK1E-203ENST00000396832 RIMBP2O15034 1052 aa25.95■■□□□ 1.75
CSNK1E-203ENST00000396832 NUDT17P0C025 328 aa25.95■■□□□ 1.75
CSNK1E-203ENST00000396832 IFNAR2P48551 515 aa25.95■■□□□ 1.75
CSNK1E-203ENST00000396832 ALDH5A1P51649 535 aaPredicted RBP25.95■■□□□ 1.75
CSNK1E-203ENST00000396832 PMS2P54278 862 aa25.95■■□□□ 1.75
CSNK1E-203ENST00000396832 SLMAPQ14BN4 828 aa25.95■■□□□ 1.75
CSNK1E-203ENST00000396832 SLFN11Q7Z7L1 901 aa25.95■■□□□ 1.75
CSNK1E-203ENST00000396832 CATSPER3Q86XQ3 398 aa25.95■■□□□ 1.75
CSNK1E-203ENST00000396832 GLG1Q92896 1179 aa25.95■■□□□ 1.75
CSNK1E-203ENST00000396832 RAB17Q9H0T7 212 aa25.95■■□□□ 1.75
CSNK1E-203ENST00000396832 PABPC3Q9H361 631 aaKnown RBP25.95■■□□□ 1.75
CSNK1E-203ENST00000396832 ARFGEF1Q9Y6D6 1849 aa25.95■■□□□ 1.75
CSNK1E-203ENST00000396832 SPDYE3A6NKU9 549 aa25.95■■□□□ 1.74
CSNK1E-203ENST00000396832 CCDC169A6NNP5 214 aa25.95■■□□□ 1.74
CSNK1E-203ENST00000396832 DDX3XO00571 662 aaKnown RBP eCLIP25.95■■□□□ 1.745e-13■■■■□ 24.3
CSNK1E-203ENST00000396832 RGS16O15492 202 aaPredicted RBP25.95■■□□□ 1.74
CSNK1E-203ENST00000396832 TOM1O60784 492 aa25.95■■□□□ 1.74
CSNK1E-203ENST00000396832 GCNT3O95395 438 aa25.95■■□□□ 1.74
CSNK1E-203ENST00000396832 RARAP10276 462 aa25.95■■□□□ 1.74
CSNK1E-203ENST00000396832 SARNPP82979 210 aaKnown RBP25.95■■□□□ 1.74
CSNK1E-203ENST00000396832 CAPRIN2Q6IMN6 1127 aaKnown RBP25.95■■□□□ 1.74
CSNK1E-203ENST00000396832 PRCCQ92733 491 aaPredicted RBP25.95■■□□□ 1.74
CSNK1E-203ENST00000396832 UTP3Q9NQZ2 479 aaKnown RBP eCLIP25.95■■□□□ 1.741e-6■■■■■ 78.1
CSNK1E-203ENST00000396832 KDM3AQ9Y4C1 1321 aa25.95■■□□□ 1.74
CSNK1E-203ENST00000396832 FLOT1O75955 427 aa25.95■■□□□ 1.74
CSNK1E-203ENST00000396832 POLD1P28340 1107 aa25.95■■□□□ 1.74
CSNK1E-203ENST00000396832 SLC12A3P55017 1021 aa25.95■■□□□ 1.74
CSNK1E-203ENST00000396832 NCALDP61601 193 aa25.95■■□□□ 1.74
CSNK1E-203ENST00000396832 USH1GQ495M9 461 aa25.95■■□□□ 1.74
CSNK1E-203ENST00000396832 DENND2CQ68D51 928 aa25.95■■□□□ 1.74
CSNK1E-203ENST00000396832 CDCA2Q69YH5 1023 aaPredicted RBP25.95■■□□□ 1.74
CSNK1E-203ENST00000396832 NT5DC3Q86UY8 548 aa25.95■■□□□ 1.74
CSNK1E-203ENST00000396832 NEK9Q8TD19 979 aa25.95■■□□□ 1.74
CSNK1E-203ENST00000396832 MICAL1Q8TDZ2 1067 aa25.95■■□□□ 1.74
CSNK1E-203ENST00000396832 RNF25Q96BH1 459 aaPredicted RBP25.95■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms